RNA–Protein interactions for RNA: ENST00000413296.1

CBX1P3-201, Transcript of chromobox 1 pseudogene 3, humanhuman

BASIC

Gene CBX1P3, Length 527 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBX1P3-201ENST00000413296 HYIQ5T013 277 aa7.19□□□□□ -1.26
CBX1P3-201ENST00000413296 C1orf53Q5VUE5 145 aa7.19□□□□□ -1.26
CBX1P3-201ENST00000413296 POTEEQ6S8J3 1075 aa7.19□□□□□ -1.26
CBX1P3-201ENST00000413296 CCDC81Q6ZN84 652 aa7.19□□□□□ -1.26
CBX1P3-201ENST00000413296 ZBTB46Q86UZ6 589 aa7.19□□□□□ -1.26
CBX1P3-201ENST00000413296 FAM169BQ8N8A8 192 aa7.19□□□□□ -1.26
CBX1P3-201ENST00000413296 EPS8L3Q8TE67 593 aaKnown RBP7.19□□□□□ -1.26
CBX1P3-201ENST00000413296 CCDC74AQ96AQ1 378 aa7.19□□□□□ -1.26
CBX1P3-201ENST00000413296 SKA1Q96BD8 255 aa7.19□□□□□ -1.26
CBX1P3-201ENST00000413296 MPP4Q96JB8 637 aa7.19□□□□□ -1.26
CBX1P3-201ENST00000413296 TMEM74Q96NL1 305 aa7.19□□□□□ -1.26
CBX1P3-201ENST00000413296 SCLT1Q96NL6 688 aa7.19□□□□□ -1.26
CBX1P3-201ENST00000413296 C2orf49Q9BVC5 232 aaPredicted RBP7.19□□□□□ -1.26
CBX1P3-201ENST00000413296 LRRC27Q9C0I9 530 aa7.19□□□□□ -1.26
CBX1P3-201ENST00000413296 C9orf78Q9NZ63 289 aaPredicted RBP7.19□□□□□ -1.26
CBX1P3-201ENST00000413296 EVLQ9UI08 416 aaPredicted RBP7.19□□□□□ -1.26
CBX1P3-201ENST00000413296 ZNF180Q9UJW8 692 aa7.19□□□□□ -1.26
CBX1P3-201ENST00000413296 NAP1L2Q9ULW6 460 aaPredicted RBP7.19□□□□□ -1.26
CBX1P3-201ENST00000413296 EPB42P16452 691 aa7.18□□□□□ -1.26
CBX1P3-201ENST00000413296 JUNDP17535 347 aa7.18□□□□□ -1.26
CBX1P3-201ENST00000413296 IRS1P35568 1242 aa7.18□□□□□ -1.26
CBX1P3-201ENST00000413296 ZAP70P43403 619 aa7.18□□□□□ -1.26
CBX1P3-201ENST00000413296 FAM160A1Q05DH4 1040 aa7.18□□□□□ -1.26
CBX1P3-201ENST00000413296 SETDB1Q15047 1291 aa7.18□□□□□ -1.26
CBX1P3-201ENST00000413296 PUM3Q15397 648 aaKnown RBP7.18□□□□□ -1.26
CBX1P3-201ENST00000413296 FXNQ16595 210 aa7.18□□□□□ -1.26
CBX1P3-201ENST00000413296 ALDH1L2Q3SY69 923 aa7.18□□□□□ -1.26
CBX1P3-201ENST00000413296 ERFEQ4G0M1 354 aa7.18□□□□□ -1.26
CBX1P3-201ENST00000413296 C1QTNF12Q5T7M4 302 aa7.18□□□□□ -1.26
CBX1P3-201ENST00000413296 RNF19BQ6ZMZ0 732 aa7.18□□□□□ -1.26
CBX1P3-201ENST00000413296 MMS22LQ6ZRQ5 1243 aa7.18□□□□□ -1.26
CBX1P3-201ENST00000413296 SPATC1Q76KD6 591 aa7.18□□□□□ -1.26
CBX1P3-201ENST00000413296 ARMCX6Q7L4S7 300 aa7.18□□□□□ -1.26
CBX1P3-201ENST00000413296 NECAB2Q7Z6G3 386 aa7.18□□□□□ -1.26
CBX1P3-201ENST00000413296 KRT77Q7Z794 578 aa7.18□□□□□ -1.26
CBX1P3-201ENST00000413296 TTC16Q8NEE8 873 aa7.18□□□□□ -1.26
CBX1P3-201ENST00000413296 PJA1Q8NG27 643 aa7.18□□□□□ -1.26
CBX1P3-201ENST00000413296 SLC39A7Q92504 469 aa7.18□□□□□ -1.26
CBX1P3-201ENST00000413296 MTMR8Q96EF0 704 aa7.18□□□□□ -1.26
CBX1P3-201ENST00000413296 TRMT2BQ96GJ1 504 aaKnown RBP7.18□□□□□ -1.26
CBX1P3-201ENST00000413296 STRBPQ96SI9 672 aaKnown RBP7.18□□□□□ -1.26
CBX1P3-201ENST00000413296 SARGQ9BW04 601 aa7.18□□□□□ -1.26
CBX1P3-201ENST00000413296 MAPRE3Q9UPY8 281 aa7.18□□□□□ -1.26
CBX1P3-201ENST00000413296 ERCC6Q03468 1493 aa7.17□□□□□ -1.26
CBX1P3-201ENST00000413296 RFPL1O75677 317 aa7.17□□□□□ -1.26
CBX1P3-201ENST00000413296 RBP3P10745 1247 aa7.17□□□□□ -1.26
CBX1P3-201ENST00000413296 PTPREP23469 700 aa7.17□□□□□ -1.26
CBX1P3-201ENST00000413296 DGKGP49619 791 aa7.17□□□□□ -1.26
CBX1P3-201ENST00000413296 BCAMP50895 628 aa7.17□□□□□ -1.26
CBX1P3-201ENST00000413296 EPHA4P54764 986 aa7.17□□□□□ -1.26
CBX1P3-201ENST00000413296 EIF6P56537 245 aaKnown RBP7.17□□□□□ -1.26
CBX1P3-201ENST00000413296 ITKQ08881 620 aa7.17□□□□□ -1.26
CBX1P3-201ENST00000413296 MTMR1Q13613 665 aa7.17□□□□□ -1.26
CBX1P3-201ENST00000413296 C8orf34Q49A92 452 aa7.17□□□□□ -1.26
CBX1P3-201ENST00000413296 TMEM67Q5HYA8 995 aa7.17□□□□□ -1.26
CBX1P3-201ENST00000413296 STAG2Q8N3U4 1231 aa7.17□□□□□ -1.26
CBX1P3-201ENST00000413296 VPS37AQ8NEZ2 397 aa7.17□□□□□ -1.26
CBX1P3-201ENST00000413296 NKD1Q969G9 470 aa7.17□□□□□ -1.26
CBX1P3-201ENST00000413296 CHMP4CQ96CF2 233 aa7.17□□□□□ -1.26
CBX1P3-201ENST00000413296 TSPAN18Q96SJ8 248 aa7.17□□□□□ -1.26
CBX1P3-201ENST00000413296 ELAC2Q9BQ52 826 aaKnown RBP7.17□□□□□ -1.26
CBX1P3-201ENST00000413296 BCL2L12Q9HB09 334 aa7.17□□□□□ -1.26
CBX1P3-201ENST00000413296 PRDM11Q9NQV5 511 aa7.17□□□□□ -1.26
CBX1P3-201ENST00000413296 STRN4Q9NRL3 753 aa7.17□□□□□ -1.26
CBX1P3-201ENST00000413296 SUPT16HQ9Y5B9 1047 aaKnown RBP7.17□□□□□ -1.26
CBX1P3-201ENST00000413296 KLRG2A4D1S0 409 aaPredicted RBP7.16□□□□□ -1.26
CBX1P3-201ENST00000413296 POTEFA5A3E0 1075 aa7.16□□□□□ -1.26
CBX1P3-201ENST00000413296 PRSS47A8MTI9 375 aa7.16□□□□□ -1.26
CBX1P3-201ENST00000413296 GSG1L2A8MUP6 293 aa7.16□□□□□ -1.26
CBX1P3-201ENST00000413296 VSTM5A8MXK1 200 aa7.16□□□□□ -1.26
CBX1P3-201ENST00000413296 FIBPO43427 364 aa7.16□□□□□ -1.26
CBX1P3-201ENST00000413296 PIP5K1CO60331 668 aa7.16□□□□□ -1.26
CBX1P3-201ENST00000413296 SERPINB3P29508 390 aa7.16□□□□□ -1.26
CBX1P3-201ENST00000413296 PABPC4Q13310 644 aaKnown RBP eCLIP7.16□□□□□ -1.26
CBX1P3-201ENST00000413296 TOMM20Q15388 145 aa7.16□□□□□ -1.26
CBX1P3-201ENST00000413296 KMT5BQ4FZB7 885 aa7.16□□□□□ -1.26
CBX1P3-201ENST00000413296 LARP1BQ659C4 914 aaKnown RBP7.16□□□□□ -1.26
CBX1P3-201ENST00000413296 FBXL19Q6PCT2 694 aa7.16□□□□□ -1.26
CBX1P3-201ENST00000413296 NXPE4Q6UWF7 544 aa7.16□□□□□ -1.26
CBX1P3-201ENST00000413296 SH3BP5LQ7L8J4 393 aa7.16□□□□□ -1.26
CBX1P3-201ENST00000413296 ETFBKMTQ8IXQ9 262 aa7.16□□□□□ -1.26
CBX1P3-201ENST00000413296 TTC14Q96N46 770 aa7.16□□□□□ -1.26
CBX1P3-201ENST00000413296 YIPF4Q9BSR8 244 aa7.16□□□□□ -1.26
CBX1P3-201ENST00000413296 CARD14Q9BXL6 1004 aa7.16□□□□□ -1.26
CBX1P3-201ENST00000413296 LGR6Q9HBX8 967 aa7.16□□□□□ -1.26
CBX1P3-201ENST00000413296 KCNQ5Q9NR82 932 aa7.16□□□□□ -1.26
CBX1P3-201ENST00000413296 SLC5A4Q9NY91 659 aa7.16□□□□□ -1.26
CBX1P3-201ENST00000413296 UBP1Q9NZI7 540 aa7.16□□□□□ -1.26
CBX1P3-201ENST00000413296 ZMYM5Q9UJ78 669 aa7.16□□□□□ -1.26
CBX1P3-201ENST00000413296 POTECB2RU33 542 aa7.15□□□□□ -1.26
CBX1P3-201ENST00000413296 CBFA2T2O43439 604 aa7.15□□□□□ -1.26
CBX1P3-201ENST00000413296 NBNO60934 754 aa7.15□□□□□ -1.26
CBX1P3-201ENST00000413296 RFPL3O75679 317 aa7.15□□□□□ -1.26
CBX1P3-201ENST00000413296 GJB6O95452 261 aa7.15□□□□□ -1.26
CBX1P3-201ENST00000413296 CCNYL3P0C7X3 344 aa7.15□□□□□ -1.26
CBX1P3-201ENST00000413296 GIPRP48546 466 aa7.15□□□□□ -1.26
CBX1P3-201ENST00000413296 PPP2R5EQ16537 467 aa7.15□□□□□ -1.26
CBX1P3-201ENST00000413296 TTLL5Q6EMB2 1281 aa7.15□□□□□ -1.26
CBX1P3-201ENST00000413296 CXorf57Q6NSI4 855 aaKnown RBP7.15□□□□□ -1.26
CBX1P3-201ENST00000413296 PDXDC1Q6P996 788 aa7.15□□□□□ -1.26
Retrieved 100 of 20,778 RNA–protein pairs in 11.2 ms