RNA–Protein interactions for RNA: ENST00000411973.3

TRAPPC12-203, Transcript of trafficking protein particle complex 12, humanhuman

TSL 5

Gene TRAPPC12, Length 838 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC12-203ENST00000411973 TAF1DQ9H5J8 278 aaPredicted RBP19■□□□□ 0.63
TRAPPC12-203ENST00000411973 EPS15P42566 896 aa18.99■□□□□ 0.63
TRAPPC12-203ENST00000411973 FBXW7Q969H0 707 aa18.99■□□□□ 0.63
TRAPPC12-203ENST00000411973 CNOT7Q9UIV1 285 aaKnown RBP18.99■□□□□ 0.63
TRAPPC12-203ENST00000411973 IQSEC3Q9UPP2 1182 aaPredicted RBP18.99■□□□□ 0.63
TRAPPC12-203ENST00000411973 APBB1O00213 710 aa18.98■□□□□ 0.63
TRAPPC12-203ENST00000411973 FRAT2O75474 233 aaPredicted RBP18.98■□□□□ 0.63
TRAPPC12-203ENST00000411973 EPHX2P34913 555 aa18.98■□□□□ 0.63
TRAPPC12-203ENST00000411973 MMP14P50281 582 aa18.98■□□□□ 0.63
TRAPPC12-203ENST00000411973 CLASRPQ8N2M8 674 aaKnown RBP18.98■□□□□ 0.63
TRAPPC12-203ENST00000411973 MXD3Q9BW11 206 aa18.98■□□□□ 0.63
TRAPPC12-203ENST00000411973 LRRCC1Q9C099 1032 aa18.98■□□□□ 0.63
TRAPPC12-203ENST00000411973 IL1RAPL2Q9NP60 686 aa18.98■□□□□ 0.63
TRAPPC12-203ENST00000411973 DBNLQ9UJU6 430 aaKnown RBP18.98■□□□□ 0.63
TRAPPC12-203ENST00000411973 H7C1D1 291 aa18.97■□□□□ 0.63
TRAPPC12-203ENST00000411973 ZNF280AP59817 542 aaPredicted RBP18.97■□□□□ 0.63
TRAPPC12-203ENST00000411973 GORABQ5T7V8 394 aa18.97■□□□□ 0.63
TRAPPC12-203ENST00000411973 PNMA8AQ86V59 439 aaPredicted RBP18.97■□□□□ 0.63
TRAPPC12-203ENST00000411973 MICALL2Q8IY33 904 aa18.97■□□□□ 0.63
TRAPPC12-203ENST00000411973 CERS5Q8N5B7 392 aa18.97■□□□□ 0.63
TRAPPC12-203ENST00000411973 TBC1D22AQ8WUA7 517 aa18.97■□□□□ 0.63
TRAPPC12-203ENST00000411973 DBNDD2Q9BQY9 259 aa18.97■□□□□ 0.63
TRAPPC12-203ENST00000411973 ADARB2Q9NS39 739 aaKnown RBP18.97■□□□□ 0.63
TRAPPC12-203ENST00000411973 DENND2AQ9ULE3 1009 aa18.97■□□□□ 0.63
TRAPPC12-203ENST00000411973 PDS5AQ29RF7 1337 aaKnown RBP18.97■□□□□ 0.63
TRAPPC12-203ENST00000411973 USP17L8P0C7I0 530 aa18.96■□□□□ 0.63
TRAPPC12-203ENST00000411973 ARID4AP29374 1257 aaPredicted RBP18.96■□□□□ 0.63
TRAPPC12-203ENST00000411973 MFSD14BQ5SR56 506 aa18.96■□□□□ 0.63
TRAPPC12-203ENST00000411973 USP50Q70EL3 339 aaPredicted RBP18.96■□□□□ 0.63
TRAPPC12-203ENST00000411973 AACSQ86V21 672 aa18.96■□□□□ 0.63
TRAPPC12-203ENST00000411973 GCC1Q96CN9 775 aa18.96■□□□□ 0.63
TRAPPC12-203ENST00000411973 ZNF512BQ96KM6 892 aaPredicted RBP18.96■□□□□ 0.63
TRAPPC12-203ENST00000411973 CCDC8Q9H0W5 538 aaPredicted RBP18.96■□□□□ 0.63
TRAPPC12-203ENST00000411973 RWDD1Q9H446 243 aaPredicted RBP18.96■□□□□ 0.63
TRAPPC12-203ENST00000411973 JAG2Q9Y219 1238 aa18.96■□□□□ 0.63
TRAPPC12-203ENST00000411973 COL1A1P02452 1464 aaPredicted RBP18.96■□□□□ 0.63
TRAPPC12-203ENST00000411973 SHTN1A0MZ66 631 aa18.95■□□□□ 0.62
TRAPPC12-203ENST00000411973 UQCRFS1P1P0C7P4 283 aa18.95■□□□□ 0.62
TRAPPC12-203ENST00000411973 CHAF1AQ13111 956 aaPredicted RBP18.95■□□□□ 0.62
TRAPPC12-203ENST00000411973 RASGRF1Q13972 1273 aa18.95■□□□□ 0.62
TRAPPC12-203ENST00000411973 CCDC158Q5M9N0 1113 aa18.95■□□□□ 0.62
TRAPPC12-203ENST00000411973 WDR66Q8TBY9 1149 aa18.95■□□□□ 0.62
TRAPPC12-203ENST00000411973 TLR7Q9NYK1 1049 aaKnown RBP18.95■□□□□ 0.62
TRAPPC12-203ENST00000411973 AKAP11Q9UKA4 1901 aa18.95■□□□□ 0.62
TRAPPC12-203ENST00000411973 ADAMTSL1Q8N6G6 1762 aa18.95■□□□□ 0.62
TRAPPC12-203ENST00000411973 TOMM70O94826 608 aa18.94■□□□□ 0.62
TRAPPC12-203ENST00000411973 C16orf71Q8IYS4 520 aaPredicted RBP18.94■□□□□ 0.62
TRAPPC12-203ENST00000411973 OGFOD1Q8N543 542 aa18.94■□□□□ 0.62
TRAPPC12-203ENST00000411973 SUGT1Q9Y2Z0 365 aa18.94■□□□□ 0.62
TRAPPC12-203ENST00000411973 SALL1Q9NSC2 1324 aa18.94■□□□□ 0.62
TRAPPC12-203ENST00000411973 KIAA0825Q8IV33 1275 aa18.93■□□□□ 0.62
TRAPPC12-203ENST00000411973 SMARCA5O60264 1052 aaPredicted RBP18.92■□□□□ 0.62
TRAPPC12-203ENST00000411973 IFIT2P09913 472 aaKnown RBP18.92■□□□□ 0.62
TRAPPC12-203ENST00000411973 TTC39AQ5SRH9 613 aa18.92■□□□□ 0.62
TRAPPC12-203ENST00000411973 SAMD7Q7Z3H4 446 aa18.92■□□□□ 0.62
TRAPPC12-203ENST00000411973 LDHDQ86WU2 507 aa18.92■□□□□ 0.62
TRAPPC12-203ENST00000411973 SMC5Q8IY18 1101 aa18.92■□□□□ 0.62
TRAPPC12-203ENST00000411973 SPATA5Q8NB90 893 aa18.92■□□□□ 0.62
TRAPPC12-203ENST00000411973 RBM46Q8TBY0 533 aaKnown RBP18.92■□□□□ 0.62
TRAPPC12-203ENST00000411973 HMG20BQ9P0W2 317 aa18.92■□□□□ 0.62
TRAPPC12-203ENST00000411973 HDAC9Q9UKV0 1011 aa18.92■□□□□ 0.62
TRAPPC12-203ENST00000411973 IGHDP01880 384 aa18.91■□□□□ 0.62
TRAPPC12-203ENST00000411973 POTEIP0CG38 1075 aa18.91■□□□□ 0.62
TRAPPC12-203ENST00000411973 POTEJP0CG39 1038 aa18.91■□□□□ 0.62
TRAPPC12-203ENST00000411973 MCAMP43121 646 aa18.91■□□□□ 0.62
TRAPPC12-203ENST00000411973 HIRAP54198 1017 aaPredicted RBP18.91■□□□□ 0.62
TRAPPC12-203ENST00000411973 SCARF1Q14162 830 aa18.91■□□□□ 0.62
TRAPPC12-203ENST00000411973 ZGPATQ8N5A5 531 aaKnown RBP18.91■□□□□ 0.62
TRAPPC12-203ENST00000411973 TRPM4Q8TD43 1214 aa18.91■□□□□ 0.62
TRAPPC12-203ENST00000411973 ZC3H15Q8WU90 426 aaKnown RBP18.91■□□□□ 0.62
TRAPPC12-203ENST00000411973 MYOZ2Q9NPC6 264 aa18.91■□□□□ 0.62
TRAPPC12-203ENST00000411973 EGFRP00533 1210 aa18.9■□□□□ 0.62
TRAPPC12-203ENST00000411973 GRIK5Q16478 980 aa18.9■□□□□ 0.62
TRAPPC12-203ENST00000411973 KIF4BQ2VIQ3 1234 aa18.9■□□□□ 0.62
TRAPPC12-203ENST00000411973 TBC1D10BQ4KMP7 808 aaPredicted RBP18.9■□□□□ 0.62
TRAPPC12-203ENST00000411973 EAPPQ56P03 285 aaPredicted RBP18.9■□□□□ 0.62
TRAPPC12-203ENST00000411973 MTMR14Q8NCE2 650 aa18.9■□□□□ 0.62
TRAPPC12-203ENST00000411973 MRIQ9BWK5 157 aa18.9■□□□□ 0.62
TRAPPC12-203ENST00000411973 PGAP2Q9UHJ9 254 aa18.9■□□□□ 0.62
TRAPPC12-203ENST00000411973 TTF2Q9UNY4 1162 aaKnown RBP18.9■□□□□ 0.62
TRAPPC12-203ENST00000411973 SERPINA10Q9UK55 444 aa18.89■□□□□ 0.61
TRAPPC12-203ENST00000411973 F8W031 263 aaPredicted RBP18.88■□□□□ 0.61
TRAPPC12-203ENST00000411973 HDLBPQ00341 1268 aaKnown RBP18.88■□□□□ 0.61
TRAPPC12-203ENST00000411973 CHADLQ6NUI6 762 aa18.88■□□□□ 0.61
TRAPPC12-203ENST00000411973 PI16Q6UXB8 463 aa18.88■□□□□ 0.61
TRAPPC12-203ENST00000411973 SMC1BQ8NDV3 1235 aa18.88■□□□□ 0.61
TRAPPC12-203ENST00000411973 PPIL4Q8WUA2 492 aaKnown RBP eCLIP18.88■□□□□ 0.61
TRAPPC12-203ENST00000411973 ZBED3Q96IU2 234 aaPredicted RBP18.88■□□□□ 0.61
TRAPPC12-203ENST00000411973 MAST3O60307 1309 aa18.88■□□□□ 0.61
TRAPPC12-203ENST00000411973 POLR2AP24928 1970 aaKnown RBP18.88■□□□□ 0.61
TRAPPC12-203ENST00000411973 LDHBP07195 334 aaKnown RBP18.87■□□□□ 0.61
TRAPPC12-203ENST00000411973 FSTL1Q12841 308 aa18.87■□□□□ 0.61
TRAPPC12-203ENST00000411973 RBM26Q5T8P6 1007 aaKnown RBP18.87■□□□□ 0.61
TRAPPC12-203ENST00000411973 ANKRD45Q5TZF3 282 aa18.87■□□□□ 0.61
TRAPPC12-203ENST00000411973 CLEC11AQ9Y240 323 aa18.87■□□□□ 0.61
TRAPPC12-203ENST00000411973 WNT10BO00744 389 aa18.86■□□□□ 0.61
TRAPPC12-203ENST00000411973 ATP5JP18859 108 aa18.86■□□□□ 0.61
TRAPPC12-203ENST00000411973 PRDX5P30044 214 aa18.86■□□□□ 0.61
TRAPPC12-203ENST00000411973 SPTY2D1Q68D10 685 aaPredicted RBP18.86■□□□□ 0.61
TRAPPC12-203ENST00000411973 BCL11AQ9H165 835 aa18.86■□□□□ 0.61
Retrieved 100 of 20,778 RNA–protein pairs in 52.3 ms