RNA–Protein interactions for RNA: ENST00000409570.3

SCRN1-203, Transcript of secernin 1, humanhuman

TSL 4 BASIC

Gene SCRN1, Length 535 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCRN1-203ENST00000409570 PCDHAC2Q9Y5I4 1007 aa21.66■■□□□ 1.06
SCRN1-203ENST00000409570 OTOFQ9HC10 1997 aa21.66■■□□□ 1.06
SCRN1-203ENST00000409570 SNAP23O00161 211 aa21.65■■□□□ 1.06
SCRN1-203ENST00000409570 IGF2BP3O00425 579 aaKnown RBP eCLIP21.65■■□□□ 1.06
SCRN1-203ENST00000409570 OTOP1Q7RTM1 612 aa21.65■■□□□ 1.06
SCRN1-203ENST00000409570 ZBTB4Q9P1Z0 1013 aaPredicted RBP21.65■■□□□ 1.06
SCRN1-203ENST00000409570 ZBTB48P10074 688 aaPredicted RBP21.64■■□□□ 1.05
SCRN1-203ENST00000409570 KCNJ4P48050 445 aa21.64■■□□□ 1.05
SCRN1-203ENST00000409570 POTEFA5A3E0 1075 aa21.63■■□□□ 1.05
SCRN1-203ENST00000409570 SLC4A2P04920 1241 aa21.63■■□□□ 1.05
SCRN1-203ENST00000409570 PPP2R3BQ9Y5P8 575 aa21.63■■□□□ 1.05
SCRN1-203ENST00000409570 BRCA2P51587 3418 aa21.63■■□□□ 1.05
SCRN1-203ENST00000409570 PPP1R12BO60237 982 aaPredicted RBP21.62■■□□□ 1.05
SCRN1-203ENST00000409570 TWISTNBQ3B726 338 aaPredicted RBP21.62■■□□□ 1.05
SCRN1-203ENST00000409570 C15orf52Q6ZUT6 534 aaKnown RBP21.62■■□□□ 1.05
SCRN1-203ENST00000409570 GCC1Q96CN9 775 aa21.62■■□□□ 1.05
SCRN1-203ENST00000409570 AOX1Q06278 1338 aa21.61■■□□□ 1.05
SCRN1-203ENST00000409570 CLRN2A0PK11 232 aa21.61■■□□□ 1.05
SCRN1-203ENST00000409570 TAF5LO75529 589 aa21.61■■□□□ 1.05
SCRN1-203ENST00000409570 CFAP100Q494V2 611 aa21.61■■□□□ 1.05
SCRN1-203ENST00000409570 INTS3Q68E01 1043 aaKnown RBP21.61■■□□□ 1.05
SCRN1-203ENST00000409570 HELBQ8NG08 1087 aaPredicted RBP21.61■■□□□ 1.05
SCRN1-203ENST00000409570 ANKRD18BA2A2Z9 1011 aa21.6■■□□□ 1.05
SCRN1-203ENST00000409570 SPDYE2BA6NHP3 402 aa21.6■■□□□ 1.05
SCRN1-203ENST00000409570 UNCXA6NJT0 531 aa21.6■■□□□ 1.05
SCRN1-203ENST00000409570 F8W031 263 aaPredicted RBP21.6■■□□□ 1.05
SCRN1-203ENST00000409570 SPDYE6P0CI01 402 aa21.6■■□□□ 1.05
SCRN1-203ENST00000409570 IL1R1P14778 569 aa21.6■■□□□ 1.05
SCRN1-203ENST00000409570 GJA5P36382 358 aa21.6■■□□□ 1.05
SCRN1-203ENST00000409570 FLIIQ13045 1269 aa21.6■■□□□ 1.05
SCRN1-203ENST00000409570 NBPF12Q5TAG4 269 aaPredicted RBP21.6■■□□□ 1.05
SCRN1-203ENST00000409570 PRMT6Q96LA8 375 aaPredicted RBP21.6■■□□□ 1.05
SCRN1-203ENST00000409570 MYH16Q9H6N6 1097 aa21.6■■□□□ 1.05
SCRN1-203ENST00000409570 USP2O75604 605 aaPredicted RBP21.59■■□□□ 1.05
SCRN1-203ENST00000409570 FKBP1AP62942 108 aaKnown RBP21.59■■□□□ 1.05
SCRN1-203ENST00000409570 SUPT20HL1Q3ZLR7 823 aa21.59■■□□□ 1.05
SCRN1-203ENST00000409570 DNAAF4Q8WXU2 420 aa21.59■■□□□ 1.05
SCRN1-203ENST00000409570 ERO1AQ96HE7 468 aa21.59■■□□□ 1.05
SCRN1-203ENST00000409570 PTPN22Q9Y2R2 807 aa21.59■■□□□ 1.05
SCRN1-203ENST00000409570 MYO1BO43795 1136 aa21.58■■□□□ 1.05
SCRN1-203ENST00000409570 CRHR2Q13324 411 aa21.58■■□□□ 1.05
SCRN1-203ENST00000409570 LINS1Q8NG48 757 aa21.58■■□□□ 1.05
SCRN1-203ENST00000409570 CD99L2Q8TCZ2 262 aa21.58■■□□□ 1.05
SCRN1-203ENST00000409570 VEZTQ9HBM0 779 aa21.58■■□□□ 1.05
SCRN1-203ENST00000409570 IREB2P48200 963 aaKnown RBP21.57■■□□□ 1.04
SCRN1-203ENST00000409570 FOXO4P98177 505 aa21.57■■□□□ 1.04
SCRN1-203ENST00000409570 CAP1Q01518 475 aa21.57■■□□□ 1.04
SCRN1-203ENST00000409570 FKBP5Q13451 457 aaPredicted RBP21.57■■□□□ 1.04
SCRN1-203ENST00000409570 ZNF804AQ7Z570 1209 aa21.57■■□□□ 1.04
SCRN1-203ENST00000409570 PTPN18Q99952 460 aa21.57■■□□□ 1.04
SCRN1-203ENST00000409570 JAG2Q9Y219 1238 aa21.57■■□□□ 1.04
SCRN1-203ENST00000409570 ARAP2Q8WZ64 1704 aa21.57■■□□□ 1.04
SCRN1-203ENST00000409570 TESPA1A2RU30 521 aaPredicted RBP21.56■■□□□ 1.04
SCRN1-203ENST00000409570 RASA3Q14644 834 aa21.56■■□□□ 1.04
SCRN1-203ENST00000409570 CCDC27Q2M243 656 aa21.56■■□□□ 1.04
SCRN1-203ENST00000409570 HABP4Q5JVS0 413 aaKnown RBP21.56■■□□□ 1.04
SCRN1-203ENST00000409570 ANKRD13AQ8IZ07 590 aa21.56■■□□□ 1.04
SCRN1-203ENST00000409570 IFIT5Q13325 482 aaKnown RBP21.55■■□□□ 1.04
SCRN1-203ENST00000409570 OTUD7BQ6GQQ9 843 aa21.55■■□□□ 1.04
SCRN1-203ENST00000409570 WWC1Q8IX03 1113 aa21.55■■□□□ 1.04
SCRN1-203ENST00000409570 ARMC5Q96C12 935 aa21.55■■□□□ 1.04
SCRN1-203ENST00000409570 EFCC1Q9HA90 598 aa21.55■■□□□ 1.04
SCRN1-203ENST00000409570 CEP290O15078 2479 aa21.53■■□□□ 1.04
SCRN1-203ENST00000409570 ZEB1P37275 1124 aaPredicted RBP21.53■■□□□ 1.04
SCRN1-203ENST00000409570 RBM5P52756 815 aaKnown RBP eCLIP21.53■■□□□ 1.04
SCRN1-203ENST00000409570 SP3Q02447 781 aa21.53■■□□□ 1.04
SCRN1-203ENST00000409570 CHMP3Q9Y3E7 222 aa21.53■■□□□ 1.04
SCRN1-203ENST00000409570 EN2P19622 333 aaPredicted RBP21.52■■□□□ 1.04
SCRN1-203ENST00000409570 SPDYE2Q495Y8 402 aa21.52■■□□□ 1.04
SCRN1-203ENST00000409570 ZNF594Q96JF6 807 aaPredicted RBP21.52■■□□□ 1.04
SCRN1-203ENST00000409570 MS4A4AQ96JQ5 239 aa21.52■■□□□ 1.04
SCRN1-203ENST00000409570 ELP3Q9H9T3 547 aa21.52■■□□□ 1.04
SCRN1-203ENST00000409570 IL16Q14005 1332 aa21.52■■□□□ 1.03
SCRN1-203ENST00000409570 FAM205AQ6ZU69 1335 aa21.52■■□□□ 1.03
SCRN1-203ENST00000409570 EPHA10Q5JZY3 1008 aa21.51■■□□□ 1.03
SCRN1-203ENST00000409570 OPTNQ96CV9 577 aa21.51■■□□□ 1.03
SCRN1-203ENST00000409570 ZNF70Q9UC06 446 aaPredicted RBP21.51■■□□□ 1.03
SCRN1-203ENST00000409570 PLIN1O60240 522 aa21.5■■□□□ 1.03
SCRN1-203ENST00000409570 CCDC184Q52MB2 194 aa21.5■■□□□ 1.03
SCRN1-203ENST00000409570 LMBR1LQ6UX01 489 aa21.5■■□□□ 1.03
SCRN1-203ENST00000409570 CDAN1Q8IWY9 1227 aa21.5■■□□□ 1.03
SCRN1-203ENST00000409570 TEPSINQ96N21 525 aa21.5■■□□□ 1.03
SCRN1-203ENST00000409570 ZSWIM8A7E2V4 1837 aa21.5■■□□□ 1.03
SCRN1-203ENST00000409570 F6X3S4 739 aa21.49■■□□□ 1.03
SCRN1-203ENST00000409570 VAMP4O75379 141 aa21.49■■□□□ 1.03
SCRN1-203ENST00000409570 TNFAIP1Q13829 316 aa21.49■■□□□ 1.03
SCRN1-203ENST00000409570 BEND3Q5T5X7 828 aa21.49■■□□□ 1.03
SCRN1-203ENST00000409570 LDHAL6AQ6ZMR3 332 aa21.49■■□□□ 1.03
SCRN1-203ENST00000409570 PPP1R3FQ6ZSY5 799 aaPredicted RBP21.49■■□□□ 1.03
SCRN1-203ENST00000409570 TDRD7Q8NHU6 1098 aaKnown RBP21.49■■□□□ 1.03
SCRN1-203ENST00000409570 CNKSR2Q8WXI2 1034 aa21.49■■□□□ 1.03
SCRN1-203ENST00000409570 TDRD3Q9H7E2 651 aaKnown RBP21.49■■□□□ 1.03
SCRN1-203ENST00000409570 FANCIQ9NVI1 1328 aa21.49■■□□□ 1.03
SCRN1-203ENST00000409570 MFSD14BQ5SR56 506 aa21.48■■□□□ 1.03
SCRN1-203ENST00000409570 BRI3BPQ8WY22 251 aa21.48■■□□□ 1.03
SCRN1-203ENST00000409570 ZNF333Q96JL9 665 aa21.48■■□□□ 1.03
SCRN1-203ENST00000409570 SERPINA10Q9UK55 444 aa21.48■■□□□ 1.03
SCRN1-203ENST00000409570 TTF2Q9UNY4 1162 aaKnown RBP21.48■■□□□ 1.03
SCRN1-203ENST00000409570 CCDC57Q2TAC2 916 aa21.47■■□□□ 1.03
SCRN1-203ENST00000409570 CNNM1Q9NRU3 951 aa21.47■■□□□ 1.03
Retrieved 100 of 20,778 RNA–protein pairs in 123.9 ms