RNA–Protein interactions for RNA: ENST00000409472.5

SCAMP4-202, Transcript of secretory carrier membrane protein 4, humanhuman

TSL 2 BASIC

Gene SCAMP4, Length 2,394 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAMP4-202ENST00000409472 TSPY26PQ9H489 355 aa17.94■□□□□ 0.46
SCAMP4-202ENST00000409472 BCORQ6W2J9 1755 aa17.93■□□□□ 0.46
SCAMP4-202ENST00000409472 ZFYP08048 801 aaPredicted RBP17.93■□□□□ 0.46
SCAMP4-202ENST00000409472 PDCP20941 246 aa17.93■□□□□ 0.46
SCAMP4-202ENST00000409472 ADD2P35612 726 aa17.93■□□□□ 0.46
SCAMP4-202ENST00000409472 SLC9C2Q5TAH2 1124 aa17.93■□□□□ 0.46
SCAMP4-202ENST00000409472 RAB11FIP4Q86YS3 637 aa17.93■□□□□ 0.46
SCAMP4-202ENST00000409472 SYAP1Q96A49 352 aaPredicted RBP17.93■□□□□ 0.46
SCAMP4-202ENST00000409472 UTP14AQ9BVJ6 771 aaKnown RBP17.93■□□□□ 0.46
SCAMP4-202ENST00000409472 LAMB2P55268 1798 aa17.93■□□□□ 0.46
SCAMP4-202ENST00000409472 HMGB1P09429 215 aaKnown RBP17.93■□□□□ 0.46
SCAMP4-202ENST00000409472 PUM3Q15397 648 aaKnown RBP17.93■□□□□ 0.46
SCAMP4-202ENST00000409472 CCDC183Q5T5S1 534 aa17.93■□□□□ 0.46
SCAMP4-202ENST00000409472 BARGINQ6ZT62 677 aa17.93■□□□□ 0.46
SCAMP4-202ENST00000409472 LINC00116Q8NCU8 138 aa17.93■□□□□ 0.46
SCAMP4-202ENST00000409472 SMARCC2Q8TAQ2 1214 aa17.93■□□□□ 0.46
SCAMP4-202ENST00000409472 CASZ1Q86V15 1759 aa17.92■□□□□ 0.46
SCAMP4-202ENST00000409472 PTPDC1A2A3K4 754 aa17.92■□□□□ 0.46
SCAMP4-202ENST00000409472 ARID4AP29374 1257 aaPredicted RBP17.92■□□□□ 0.46
SCAMP4-202ENST00000409472 TERF1P54274 439 aa17.92■□□□□ 0.46
SCAMP4-202ENST00000409472 C3orf67Q6ZVT6 689 aa17.92■□□□□ 0.46
SCAMP4-202ENST00000409472 TICAM2Q86XR7 235 aa17.92■□□□□ 0.46
SCAMP4-202ENST00000409472 WTIPA6NIX2 430 aaPredicted RBP17.91■□□□□ 0.46
SCAMP4-202ENST00000409472 ANTXR2P58335 489 aa17.91■□□□□ 0.46
SCAMP4-202ENST00000409472 RESTQ13127 1097 aa17.91■□□□□ 0.46
SCAMP4-202ENST00000409472 RASGRF1Q13972 1273 aa17.91■□□□□ 0.46
SCAMP4-202ENST00000409472 ATRNO75882 1429 aa17.91■□□□□ 0.46
SCAMP4-202ENST00000409472 ZNF532Q9HCE3 1301 aa17.91■□□□□ 0.46
SCAMP4-202ENST00000409472 PDIA3P30101 505 aaKnown RBP17.91■□□□□ 0.46
SCAMP4-202ENST00000409472 KRT85P78386 507 aa17.91■□□□□ 0.46
SCAMP4-202ENST00000409472 GIMAP6Q6P9H5 292 aa17.91■□□□□ 0.46
SCAMP4-202ENST00000409472 C8orf37Q96NL8 207 aa17.91■□□□□ 0.46
SCAMP4-202ENST00000409472 PDE6AP16499 860 aa17.9■□□□□ 0.46
SCAMP4-202ENST00000409472 LIG1P18858 919 aa17.9■□□□□ 0.46
SCAMP4-202ENST00000409472 PDLIM2Q96JY6 352 aa17.9■□□□□ 0.46
SCAMP4-202ENST00000409472 ZNF512BQ96KM6 892 aaPredicted RBP17.9■□□□□ 0.46
SCAMP4-202ENST00000409472 MROH5Q6ZUA9 1318 aa17.9■□□□□ 0.46
SCAMP4-202ENST00000409472 SALL1Q9NSC2 1324 aa17.9■□□□□ 0.46
SCAMP4-202ENST00000409472 MYH15Q9Y2K3 1946 aa17.9■□□□□ 0.46
SCAMP4-202ENST00000409472 BCL9LQ86UU0 1499 aa17.9■□□□□ 0.46
SCAMP4-202ENST00000409472 IMMTQ16891 758 aaKnown RBP17.9■□□□□ 0.46
SCAMP4-202ENST00000409472 TBC1D10CQ8IV04 446 aa17.9■□□□□ 0.46
SCAMP4-202ENST00000409472 MB21D2Q8IYB1 491 aaPredicted RBP17.9■□□□□ 0.46
SCAMP4-202ENST00000409472 LPIN2Q92539 896 aa17.9■□□□□ 0.46
SCAMP4-202ENST00000409472 FTOQ9C0B1 505 aaKnown RBP eCLIP17.9■□□□□ 0.46
SCAMP4-202ENST00000409472 DOCK2Q92608 1830 aa17.9■□□□□ 0.46
SCAMP4-202ENST00000409472 EP400Q96L91 3159 aa17.9■□□□□ 0.46
SCAMP4-202ENST00000409472 TCRBV5S4A2TA0A5A2 114 aa17.89■□□□□ 0.45
SCAMP4-202ENST00000409472 FAM182BQ5T319 152 aa17.89■□□□□ 0.45
SCAMP4-202ENST00000409472 GUCY1B3Q02153 619 aa17.89■□□□□ 0.45
SCAMP4-202ENST00000409472 MPHOSPH8Q99549 860 aa17.89■□□□□ 0.45
SCAMP4-202ENST00000409472 DDX24Q9GZR7 859 aaKnown RBP eCLIP17.89■□□□□ 0.45
SCAMP4-202ENST00000409472 PRC1O43663 620 aa17.88■□□□□ 0.45
SCAMP4-202ENST00000409472 LRRFIP1Q32MZ4 808 aaKnown RBP17.88■□□□□ 0.45
SCAMP4-202ENST00000409472 SMAP1Q8IYB5 467 aaPredicted RBP17.88■□□□□ 0.45
SCAMP4-202ENST00000409472 ANP32BQ92688 251 aaKnown RBP17.88■□□□□ 0.45
SCAMP4-202ENST00000409472 PHF14O94880 888 aa17.88■□□□□ 0.45
SCAMP4-202ENST00000409472 BCAMP50895 628 aa17.88■□□□□ 0.45
SCAMP4-202ENST00000409472 FAM184AQ8NB25 1140 aa17.88■□□□□ 0.45
SCAMP4-202ENST00000409472 SPATA5Q8NB90 893 aa17.88■□□□□ 0.45
SCAMP4-202ENST00000409472 LEO1Q8WVC0 666 aaPredicted RBP17.88■□□□□ 0.45
SCAMP4-202ENST00000409472 A0A1B0GUL6 1792 aa17.87■□□□□ 0.45
SCAMP4-202ENST00000409472 H3BQV1 296 aa17.87■□□□□ 0.45
SCAMP4-202ENST00000409472 IFFO2Q5TF58 517 aa17.87■□□□□ 0.45
SCAMP4-202ENST00000409472 INCENPQ9NQS7 918 aa17.87■□□□□ 0.45
SCAMP4-202ENST00000409472 CTNNA3Q9UI47 895 aa17.87■□□□□ 0.45
SCAMP4-202ENST00000409472 IQSEC3Q9UPP2 1182 aaPredicted RBP17.87■□□□□ 0.45
SCAMP4-202ENST00000409472 FDPSP14324 419 aaKnown RBP17.87■□□□□ 0.45
SCAMP4-202ENST00000409472 ERFEQ4G0M1 354 aa17.87■□□□□ 0.45
SCAMP4-202ENST00000409472 PARP10Q53GL7 1025 aa17.87■□□□□ 0.45
SCAMP4-202ENST00000409472 PDZRN4Q6ZMN7 1036 aaPredicted RBP17.87■□□□□ 0.45
SCAMP4-202ENST00000409472 MTERF4Q7Z6M4 381 aaKnown RBP17.87■□□□□ 0.45
SCAMP4-202ENST00000409472 PGBD1Q96JS3 809 aa17.87■□□□□ 0.45
SCAMP4-202ENST00000409472 SPATA32Q96LK8 384 aa17.87■□□□□ 0.45
SCAMP4-202ENST00000409472 AK7Q96M32 723 aa17.87■□□□□ 0.45
SCAMP4-202ENST00000409472 FUCA2Q9BTY2 467 aa17.87■□□□□ 0.45
SCAMP4-202ENST00000409472 HPS5Q9UPZ3 1129 aa17.87■□□□□ 0.45
SCAMP4-202ENST00000409472 SLC5A1P13866 664 aa17.86■□□□□ 0.45
SCAMP4-202ENST00000409472 CEBPZQ03701 1054 aaKnown RBP17.86■□□□□ 0.45
SCAMP4-202ENST00000409472 CCDC152Q4G0S7 254 aa17.86■□□□□ 0.45
SCAMP4-202ENST00000409472 BICDL1Q6ZP65 573 aa17.86■□□□□ 0.45
SCAMP4-202ENST00000409472 LLPHQ9BRT6 129 aaKnown RBP17.86■□□□□ 0.45
SCAMP4-202ENST00000409472 EPB41L4AQ9HCS5 686 aaPredicted RBP17.86■□□□□ 0.45
SCAMP4-202ENST00000409472 ELP1O95163 1332 aa17.86■□□□□ 0.45
SCAMP4-202ENST00000409472 CARMIL3Q8ND23 1372 aa17.86■□□□□ 0.45
SCAMP4-202ENST00000409472 ZNF213O14771 459 aa17.86■□□□□ 0.45
SCAMP4-202ENST00000409472 UBE3CQ15386 1083 aa17.86■□□□□ 0.45
SCAMP4-202ENST00000409472 CSPP1Q1MSJ5 1256 aa17.86■□□□□ 0.45
SCAMP4-202ENST00000409472 MAGEB6Q8N7X4 407 aa17.86■□□□□ 0.45
SCAMP4-202ENST00000409472 SENP2Q9HC62 589 aa17.86■□□□□ 0.45
SCAMP4-202ENST00000409472 KLF18A0A0U1RQI7 1052 aa17.85■□□□□ 0.45
SCAMP4-202ENST00000409472 APPP05067 770 aa17.85■□□□□ 0.45
SCAMP4-202ENST00000409472 CHRNDQ07001 517 aa17.85■□□□□ 0.45
SCAMP4-202ENST00000409472 TTF1Q15361 905 aaPredicted RBP17.85■□□□□ 0.45
SCAMP4-202ENST00000409472 CAMK4Q16566 473 aa17.85■□□□□ 0.45
SCAMP4-202ENST00000409472 OTUD7BQ6GQQ9 843 aa17.85■□□□□ 0.45
SCAMP4-202ENST00000409472 CYB5R4Q7L1T6 521 aa17.85■□□□□ 0.45
SCAMP4-202ENST00000409472 ILDR1Q86SU0 546 aaPredicted RBP17.85■□□□□ 0.45
SCAMP4-202ENST00000409472 AMIGO3Q86WK7 504 aa17.85■□□□□ 0.45
SCAMP4-202ENST00000409472 GJB4Q9NTQ9 266 aa17.85■□□□□ 0.45
Retrieved 100 of 20,778 RNA–protein pairs in 117.1 ms