RNA–Protein interactions for RNA: ENST00000407298.7

APOBEC3B-204, Transcript of apolipoprotein B mRNA editing enzyme catalytic subunit 3B, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene APOBEC3B, Length 1,282 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APOBEC3B-204ENST00000407298 NPM3O75607 178 aaKnown RBP15.68■□□□□ 0.1
APOBEC3B-204ENST00000407298 SLC4A2P04920 1241 aa15.68■□□□□ 0.1
APOBEC3B-204ENST00000407298 CSF1RP07333 972 aa15.68■□□□□ 0.1
APOBEC3B-204ENST00000407298 FKBP1AP62942 108 aaKnown RBP15.68■□□□□ 0.1
APOBEC3B-204ENST00000407298 CHRNDQ07001 517 aa15.68■□□□□ 0.1
APOBEC3B-204ENST00000407298 ARHGEF6Q15052 776 aa15.68■□□□□ 0.1
APOBEC3B-204ENST00000407298 C15orf52Q6ZUT6 534 aaKnown RBP15.68■□□□□ 0.1
APOBEC3B-204ENST00000407298 OTOP1Q7RTM1 612 aa15.68■□□□□ 0.1
APOBEC3B-204ENST00000407298 ZNF804AQ7Z570 1209 aa15.68■□□□□ 0.1
APOBEC3B-204ENST00000407298 TSPYL6Q8N831 410 aa15.68■□□□□ 0.1
APOBEC3B-204ENST00000407298 ZBTB4Q9P1Z0 1013 aaPredicted RBP15.67■□□□□ 0.1
APOBEC3B-204ENST00000407298 SPEF2Q9C093 1822 aa15.66■□□□□ 0.1
APOBEC3B-204ENST00000407298 ZNF316A6NFI3 1004 aaPredicted RBP15.66■□□□□ 0.1
APOBEC3B-204ENST00000407298 KLRK1P26718 216 aa15.66■□□□□ 0.1
APOBEC3B-204ENST00000407298 TWISTNBQ3B726 338 aaPredicted RBP15.66■□□□□ 0.1
APOBEC3B-204ENST00000407298 CFAP100Q494V2 611 aa15.66■□□□□ 0.1
APOBEC3B-204ENST00000407298 ANKRD13AQ8IZ07 590 aa15.66■□□□□ 0.1
APOBEC3B-204ENST00000407298 SPDYE2BA6NHP3 402 aa15.65■□□□□ 0.1
APOBEC3B-204ENST00000407298 SPDYE6P0CI01 402 aa15.65■□□□□ 0.1
APOBEC3B-204ENST00000407298 IL1R1P14778 569 aa15.65■□□□□ 0.1
APOBEC3B-204ENST00000407298 IFIT5Q13325 482 aaKnown RBP15.65■□□□□ 0.1
APOBEC3B-204ENST00000407298 TNFAIP1Q13829 316 aa15.65■□□□□ 0.1
APOBEC3B-204ENST00000407298 LINS1Q8NG48 757 aa15.65■□□□□ 0.1
APOBEC3B-204ENST00000407298 CLMNQ96JQ2 1002 aa15.65■□□□□ 0.1
APOBEC3B-204ENST00000407298 EFCC1Q9HA90 598 aa15.65■□□□□ 0.1
APOBEC3B-204ENST00000407298 VEZTQ9HBM0 779 aa15.65■□□□□ 0.1
APOBEC3B-204ENST00000407298 PTPN22Q9Y2R2 807 aa15.65■□□□□ 0.1
APOBEC3B-204ENST00000407298 ZNF646O15015 1829 aaPredicted RBP15.64■□□□□ 0.09
APOBEC3B-204ENST00000407298 IGF2BP3O00425 579 aaKnown RBP eCLIP15.64■□□□□ 0.09
APOBEC3B-204ENST00000407298 RBM5P52756 815 aaKnown RBP eCLIP15.64■□□□□ 0.09
APOBEC3B-204ENST00000407298 SP3Q02447 781 aa15.64■□□□□ 0.09
APOBEC3B-204ENST00000407298 FLIIQ13045 1269 aa15.64■□□□□ 0.09
APOBEC3B-204ENST00000407298 FKBP5Q13451 457 aaPredicted RBP15.64■□□□□ 0.09
APOBEC3B-204ENST00000407298 HABP4Q5JVS0 413 aaKnown RBP15.64■□□□□ 0.09
APOBEC3B-204ENST00000407298 DNAAF4Q8WXU2 420 aa15.64■□□□□ 0.09
APOBEC3B-204ENST00000407298 TSR2Q969E8 191 aaKnown RBP15.64■□□□□ 0.09
APOBEC3B-204ENST00000407298 FZD1Q9UP38 647 aa15.64■□□□□ 0.09
APOBEC3B-204ENST00000407298 CLRN2A0PK11 232 aa15.63■□□□□ 0.09
APOBEC3B-204ENST00000407298 TESPA1A2RU30 521 aaPredicted RBP15.63■□□□□ 0.09
APOBEC3B-204ENST00000407298 F8W031 263 aaPredicted RBP15.63■□□□□ 0.09
APOBEC3B-204ENST00000407298 TAF5LO75529 589 aa15.63■□□□□ 0.09
APOBEC3B-204ENST00000407298 CASP7P55210 303 aa15.63■□□□□ 0.09
APOBEC3B-204ENST00000407298 CRHR2Q13324 411 aa15.63■□□□□ 0.09
APOBEC3B-204ENST00000407298 CCDC27Q2M243 656 aa15.63■□□□□ 0.09
APOBEC3B-204ENST00000407298 G2E3Q7L622 706 aa15.63■□□□□ 0.09
APOBEC3B-204ENST00000407298 NBPF11Q86T75 865 aa15.63■□□□□ 0.09
APOBEC3B-204ENST00000407298 CERS5Q8N5B7 392 aa15.63■□□□□ 0.09
APOBEC3B-204ENST00000407298 CD99L2Q8TCZ2 262 aa15.63■□□□□ 0.09
APOBEC3B-204ENST00000407298 ARMC5Q96C12 935 aa15.63■□□□□ 0.09
APOBEC3B-204ENST00000407298 PRMT6Q96LA8 375 aaPredicted RBP15.63■□□□□ 0.09
APOBEC3B-204ENST00000407298 TMEM106CQ9BVX2 250 aa15.63■□□□□ 0.09
APOBEC3B-204ENST00000407298 HTTP42858 3142 aa15.63■□□□□ 0.09
APOBEC3B-204ENST00000407298 KIAA0100Q14667 2235 aaKnown RBP15.62■□□□□ 0.09
APOBEC3B-204ENST00000407298 POTEFA5A3E0 1075 aa15.62■□□□□ 0.09
APOBEC3B-204ENST00000407298 USP2O75604 605 aaPredicted RBP15.62■□□□□ 0.09
APOBEC3B-204ENST00000407298 WDHD1O75717 1129 aaPredicted RBP15.62■□□□□ 0.09
APOBEC3B-204ENST00000407298 RASA3Q14644 834 aa15.62■□□□□ 0.09
APOBEC3B-204ENST00000407298 NBPF12Q5TAG4 269 aaPredicted RBP15.62■□□□□ 0.09
APOBEC3B-204ENST00000407298 CHMP3Q9Y3E7 222 aa15.62■□□□□ 0.09
APOBEC3B-204ENST00000407298 CACNB1Q02641 598 aaPredicted RBP15.61■□□□□ 0.09
APOBEC3B-204ENST00000407298 CCDC184Q52MB2 194 aa15.61■□□□□ 0.09
APOBEC3B-204ENST00000407298 TAF7LQ5H9L4 462 aa15.61■□□□□ 0.09
APOBEC3B-204ENST00000407298 HELBQ8NG08 1087 aaPredicted RBP15.61■□□□□ 0.09
APOBEC3B-204ENST00000407298 IL16Q14005 1332 aa15.61■□□□□ 0.09
APOBEC3B-204ENST00000407298 IRS2Q9Y4H2 1338 aa15.61■□□□□ 0.09
APOBEC3B-204ENST00000407298 GTF2A2P52657 109 aa15.6■□□□□ 0.09
APOBEC3B-204ENST00000407298 CCDC57Q2TAC2 916 aa15.6■□□□□ 0.09
APOBEC3B-204ENST00000407298 LDHAL6AQ6ZMR3 332 aa15.6■□□□□ 0.09
APOBEC3B-204ENST00000407298 ZFYVE28Q9HCC9 887 aa15.6■□□□□ 0.09
APOBEC3B-204ENST00000407298 SERPINA10Q9UK55 444 aa15.6■□□□□ 0.09
APOBEC3B-204ENST00000407298 SSC5DA1L4H1 1573 aa15.6■□□□□ 0.09
APOBEC3B-204ENST00000407298 ECM29Q5VYK3 1845 aa15.59■□□□□ 0.09
APOBEC3B-204ENST00000407298 MKI67P46013 3256 aaKnown RBP15.59■□□□□ 0.09
APOBEC3B-204ENST00000407298 SNAP23O00161 211 aa15.59■□□□□ 0.09
APOBEC3B-204ENST00000407298 GJA5P36382 358 aa15.59■□□□□ 0.09
APOBEC3B-204ENST00000407298 TNNI2P48788 182 aa15.59■□□□□ 0.09
APOBEC3B-204ENST00000407298 WWC1Q8IX03 1113 aa15.59■□□□□ 0.09
APOBEC3B-204ENST00000407298 OPTNQ96CV9 577 aa15.59■□□□□ 0.09
APOBEC3B-204ENST00000407298 PTPN18Q99952 460 aa15.59■□□□□ 0.09
APOBEC3B-204ENST00000407298 CNNM1Q9NRU3 951 aa15.59■□□□□ 0.09
APOBEC3B-204ENST00000407298 PCDHAC2Q9Y5I4 1007 aa15.59■□□□□ 0.09
APOBEC3B-204ENST00000407298 FAM205AQ6ZU69 1335 aa15.59■□□□□ 0.09
APOBEC3B-204ENST00000407298 CENPFP49454 3210 aa15.58■□□□□ 0.08
APOBEC3B-204ENST00000407298 PLIN1O60240 522 aa15.58■□□□□ 0.08
APOBEC3B-204ENST00000407298 EN2P19622 333 aaPredicted RBP15.58■□□□□ 0.08
APOBEC3B-204ENST00000407298 FOXO4P98177 505 aa15.58■□□□□ 0.08
APOBEC3B-204ENST00000407298 SPDYE2Q495Y8 402 aa15.58■□□□□ 0.08
APOBEC3B-204ENST00000407298 SLC9C1Q4G0N8 1177 aa15.58■□□□□ 0.08
APOBEC3B-204ENST00000407298 MFSD14BQ5SR56 506 aa15.58■□□□□ 0.08
APOBEC3B-204ENST00000407298 ELP3Q9H9T3 547 aa15.58■□□□□ 0.08
APOBEC3B-204ENST00000407298 ZNF70Q9UC06 446 aaPredicted RBP15.58■□□□□ 0.08
APOBEC3B-204ENST00000407298 LAMB1P07942 1786 aa15.57■□□□□ 0.08
APOBEC3B-204ENST00000407298 CACNA1FO60840 1977 aa15.57■□□□□ 0.08
APOBEC3B-204ENST00000407298 MAP3K9P80192 1104 aa15.57■□□□□ 0.08
APOBEC3B-204ENST00000407298 UBE4AQ14139 1066 aa15.57■□□□□ 0.08
APOBEC3B-204ENST00000407298 KIF22Q14807 665 aa15.57■□□□□ 0.08
APOBEC3B-204ENST00000407298 TAF1CQ15572 869 aaPredicted RBP15.57■□□□□ 0.08
APOBEC3B-204ENST00000407298 LMBR1LQ6UX01 489 aa15.57■□□□□ 0.08
APOBEC3B-204ENST00000407298 MS4A4AQ96JQ5 239 aa15.57■□□□□ 0.08
APOBEC3B-204ENST00000407298 TTF2Q9UNY4 1162 aaKnown RBP15.57■□□□□ 0.08
Retrieved 100 of 20,778 RNA–protein pairs in 27.4 ms