RNA–Protein interactions for RNA: ENST00000406797.5

PRKAR1B-204, Transcript of protein kinase cAMP-dependent type I regulatory subunit beta, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PRKAR1B, Length 2,553 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKAR1B-204ENST00000406797 LSG1Q9H089 658 aaKnown RBP21.27■■□□□ 1
PRKAR1B-204ENST00000406797 TMEM63CQ9P1W3 806 aa21.27■■□□□ 1
PRKAR1B-204ENST00000406797 PUM3Q15397 648 aaKnown RBP21.27■□□□□ 0.99
PRKAR1B-204ENST00000406797 RUFY2Q8WXA3 655 aa21.27■□□□□ 0.99
PRKAR1B-204ENST00000406797 HIP1O00291 1037 aa21.26■□□□□ 0.99
PRKAR1B-204ENST00000406797 CYP2E1P05181 493 aaPredicted RBP21.26■□□□□ 0.99
PRKAR1B-204ENST00000406797 MAPK8IP2Q13387 824 aaPredicted RBP21.26■□□□□ 0.99
PRKAR1B-204ENST00000406797 DDX46Q7L014 1031 aaKnown RBP21.26■□□□□ 0.99
PRKAR1B-204ENST00000406797 CELF1Q92879 486 aaKnown RBP21.26■□□□□ 0.99
PRKAR1B-204ENST00000406797 EDC3Q96F86 508 aaKnown RBP21.26■□□□□ 0.99
PRKAR1B-204ENST00000406797 XAGE2Q96GT9 111 aa21.26■□□□□ 0.99
PRKAR1B-204ENST00000406797 PALD1Q9ULE6 856 aa21.26■□□□□ 0.99
PRKAR1B-204ENST00000406797 RAD50Q92878 1312 aa21.26■□□□□ 0.99
PRKAR1B-204ENST00000406797 MCCP23508 829 aa21.26■□□□□ 0.99
PRKAR1B-204ENST00000406797 GTF2F1P35269 517 aaKnown RBP eCLIP21.26■□□□□ 0.997e-7■■■■■ 41.6
PRKAR1B-204ENST00000406797 RPS8P62241 208 aaKnown RBP21.26■□□□□ 0.99
PRKAR1B-204ENST00000406797 LPIN2Q92539 896 aa21.25■□□□□ 0.99
PRKAR1B-204ENST00000406797 FSD1Q9BTV5 496 aa21.25■□□□□ 0.99
PRKAR1B-204ENST00000406797 ANAPC15P60006 121 aa21.25■□□□□ 0.99
PRKAR1B-204ENST00000406797 MPNDQ8N594 471 aa21.25■□□□□ 0.99
PRKAR1B-204ENST00000406797 HSPA4P34932 840 aa21.24■□□□□ 0.99
PRKAR1B-204ENST00000406797 HMGN5P82970 282 aaKnown RBP21.24■□□□□ 0.99
PRKAR1B-204ENST00000406797 CHRNDQ07001 517 aa21.24■□□□□ 0.99
PRKAR1B-204ENST00000406797 ZNF512BQ96KM6 892 aaPredicted RBP21.24■□□□□ 0.99
PRKAR1B-204ENST00000406797 SNRKQ9NRH2 765 aa21.24■□□□□ 0.99
PRKAR1B-204ENST00000406797 PARP3Q9Y6F1 533 aa21.24■□□□□ 0.99
PRKAR1B-204ENST00000406797 NMIQ13287 307 aaPredicted RBP21.24■□□□□ 0.99
PRKAR1B-204ENST00000406797 FAM227BQ96M60 508 aa21.24■□□□□ 0.99
PRKAR1B-204ENST00000406797 NDUFB9Q9Y6M9 179 aa21.24■□□□□ 0.99
PRKAR1B-204ENST00000406797 RFX7Q2KHR2 1363 aa21.24■□□□□ 0.99
PRKAR1B-204ENST00000406797 MMP10P09238 476 aa21.23■□□□□ 0.99
PRKAR1B-204ENST00000406797 ADORA1P30542 326 aa21.23■□□□□ 0.99
PRKAR1B-204ENST00000406797 GRAPQ13588 217 aa21.23■□□□□ 0.99
PRKAR1B-204ENST00000406797 CCDC158Q5M9N0 1113 aa21.23■□□□□ 0.99
PRKAR1B-204ENST00000406797 GRAPLQ8TC17 118 aaPredicted RBP21.23■□□□□ 0.99
PRKAR1B-204ENST00000406797 NSFL1CQ9UNZ2 370 aaKnown RBP21.23■□□□□ 0.99
PRKAR1B-204ENST00000406797 HOXA10P31260 410 aaPredicted RBP21.23■□□□□ 0.99
PRKAR1B-204ENST00000406797 TICAM2Q86XR7 235 aa21.23■□□□□ 0.99
PRKAR1B-204ENST00000406797 CHAMP1Q96JM3 812 aa21.23■□□□□ 0.99
PRKAR1B-204ENST00000406797 DNAJC2Q99543 621 aaKnown RBP21.23■□□□□ 0.99
PRKAR1B-204ENST00000406797 BRIP1Q9BX63 1249 aa21.23■□□□□ 0.99
PRKAR1B-204ENST00000406797 MINPP1Q9UNW1 487 aa21.23■□□□□ 0.99
PRKAR1B-204ENST00000406797 KIF3AQ9Y496 699 aa21.23■□□□□ 0.99
PRKAR1B-204ENST00000406797 SLC5A1P13866 664 aa21.22■□□□□ 0.99
PRKAR1B-204ENST00000406797 U2AF2P26368 475 aaKnown RBP eCLIP21.22■□□□□ 0.99
PRKAR1B-204ENST00000406797 HELBQ8NG08 1087 aaPredicted RBP21.21■□□□□ 0.99
PRKAR1B-204ENST00000406797 AKAP11Q9UKA4 1901 aa21.21■□□□□ 0.99
PRKAR1B-204ENST00000406797 A0A0D9SFI3 127 aa21.21■□□□□ 0.99
PRKAR1B-204ENST00000406797 RPGRQ92834 1020 aaKnown RBP21.21■□□□□ 0.99
PRKAR1B-204ENST00000406797 RBM17Q96I25 401 aaKnown RBP21.21■□□□□ 0.99
PRKAR1B-204ENST00000406797 MED23Q9ULK4 1368 aa21.2■□□□□ 0.98
PRKAR1B-204ENST00000406797 PTH1RQ03431 593 aa21.2■□□□□ 0.98
PRKAR1B-204ENST00000406797 NOLC1Q14978 699 aaKnown RBP eCLIP21.2■□□□□ 0.98
PRKAR1B-204ENST00000406797 GORABQ5T7V8 394 aa21.2■□□□□ 0.98
PRKAR1B-204ENST00000406797 TAF3Q5VWG9 929 aa21.2■□□□□ 0.98
PRKAR1B-204ENST00000406797 C17orf53Q8N3J3 647 aaPredicted RBP21.2■□□□□ 0.98
PRKAR1B-204ENST00000406797 TAF5LO75529 589 aa21.2■□□□□ 0.98
PRKAR1B-204ENST00000406797 UBE4AQ14139 1066 aa21.2■□□□□ 0.98
PRKAR1B-204ENST00000406797 TTC39AQ5SRH9 613 aa21.2■□□□□ 0.98
PRKAR1B-204ENST00000406797 CRAMP1Q96RY5 1269 aa21.2■□□□□ 0.98
PRKAR1B-204ENST00000406797 ANKRD2Q9GZV1 360 aa21.2■□□□□ 0.98
PRKAR1B-204ENST00000406797 IFIT1P09914 478 aaKnown RBP21.19■□□□□ 0.98
PRKAR1B-204ENST00000406797 PIBF1Q8WXW3 757 aa21.19■□□□□ 0.98
PRKAR1B-204ENST00000406797 LRRC37AA6NMS7 1700 aa21.19■□□□□ 0.98
PRKAR1B-204ENST00000406797 MSL1Q68DK7 614 aa21.19■□□□□ 0.98
PRKAR1B-204ENST00000406797 PDCL2Q8N4E4 241 aa21.19■□□□□ 0.98
PRKAR1B-204ENST00000406797 KBTBD3Q8NAB2 608 aa21.19■□□□□ 0.98
PRKAR1B-204ENST00000406797 SLC16A10Q8TF71 515 aa21.19■□□□□ 0.98
PRKAR1B-204ENST00000406797 ST18O60284 1047 aa21.18■□□□□ 0.98
PRKAR1B-204ENST00000406797 CDK11BP21127 795 aaKnown RBP21.18■□□□□ 0.98
PRKAR1B-204ENST00000406797 ZNF771Q7L3S4 317 aaPredicted RBP21.18■□□□□ 0.98
PRKAR1B-204ENST00000406797 PAG1Q9NWQ8 432 aa21.18■□□□□ 0.98
PRKAR1B-204ENST00000406797 COL11A2P13942 1736 aaPredicted RBP21.18■□□□□ 0.98
PRKAR1B-204ENST00000406797 CCDC171Q6TFL3 1326 aa21.18■□□□□ 0.98
PRKAR1B-204ENST00000406797 ARID4AP29374 1257 aaPredicted RBP21.18■□□□□ 0.98
PRKAR1B-204ENST00000406797 IRX5P78411 483 aaPredicted RBP21.17■□□□□ 0.98
PRKAR1B-204ENST00000406797 GOLIM4O00461 696 aa21.17■□□□□ 0.98
PRKAR1B-204ENST00000406797 UQCRFS1P1P0C7P4 283 aa21.17■□□□□ 0.98
PRKAR1B-204ENST00000406797 PDE6BP35913 854 aa21.17■□□□□ 0.98
PRKAR1B-204ENST00000406797 CCDC102BQ68D86 513 aa21.17■□□□□ 0.98
PRKAR1B-204ENST00000406797 ZDHHC9Q9Y397 364 aa21.17■□□□□ 0.98
PRKAR1B-204ENST00000406797 SNX14Q9Y5W7 946 aa21.17■□□□□ 0.98
PRKAR1B-204ENST00000406797 BBOX1O75936 387 aa21.16■□□□□ 0.98
PRKAR1B-204ENST00000406797 NEK4P51957 841 aa21.16■□□□□ 0.98
PRKAR1B-204ENST00000406797 ZGPATQ8N5A5 531 aaKnown RBP21.16■□□□□ 0.98
PRKAR1B-204ENST00000406797 TMC4Q7Z404 712 aa21.15■□□□□ 0.98
PRKAR1B-204ENST00000406797 ZNF589Q86UQ0 364 aaPredicted RBP21.15■□□□□ 0.98
PRKAR1B-204ENST00000406797 RASEFQ8IZ41 740 aa21.15■□□□□ 0.98
PRKAR1B-204ENST00000406797 KCNB2Q92953 911 aa21.15■□□□□ 0.98
PRKAR1B-204ENST00000406797 CHGBP05060 677 aa21.15■□□□□ 0.98
PRKAR1B-204ENST00000406797 MAP4K1Q92918 833 aa21.15■□□□□ 0.98
PRKAR1B-204ENST00000406797 SRGNP10124 158 aa21.14■□□□□ 0.98
PRKAR1B-204ENST00000406797 PHKA1P46020 1223 aa21.14■□□□□ 0.98
PRKAR1B-204ENST00000406797 SNAP23O00161 211 aa21.14■□□□□ 0.97
PRKAR1B-204ENST00000406797 NPR1P16066 1061 aa21.14■□□□□ 0.97
PRKAR1B-204ENST00000406797 NECTIN1Q15223 517 aa21.14■□□□□ 0.97
PRKAR1B-204ENST00000406797 UPF1Q92900 1129 aaKnown RBP eCLIP21.14■□□□□ 0.976e-7■■■■■ 41.2
PRKAR1B-204ENST00000406797 MCAMP43121 646 aa21.13■□□□□ 0.97
PRKAR1B-204ENST00000406797 SCARF1Q14162 830 aa21.13■□□□□ 0.97
PRKAR1B-204ENST00000406797 TTC12Q9H892 705 aaPredicted RBP21.13■□□□□ 0.97
Retrieved 100 of 20,778 RNA–protein pairs in 113.7 ms