RNA–Protein interactions for RNA: ENST00000401884.5

SNED1-204, Transcript of sushi, nidogen and EGF like domains 1, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene SNED1, Length 4,538 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNED1-204ENST00000401884 JAKMIP3Q5VZ66 844 aa20.27■□□□□ 0.84
SNED1-204ENST00000401884 NGLY1Q96IV0 654 aa20.27■□□□□ 0.84
SNED1-204ENST00000401884 SEC62Q99442 399 aaKnown RBP20.27■□□□□ 0.84
SNED1-204ENST00000401884 RAB34Q9BZG1 259 aa20.27■□□□□ 0.84
SNED1-204ENST00000401884 GBP3Q9H0R5 595 aa20.26■□□□□ 0.83
SNED1-204ENST00000401884 ZSWIM4Q9H7M6 989 aa20.26■□□□□ 0.83
SNED1-204ENST00000401884 RGS12O14924 1447 aa20.26■□□□□ 0.83
SNED1-204ENST00000401884 PRKCSHP14314 528 aaPredicted RBP20.26■□□□□ 0.83
SNED1-204ENST00000401884 NOL12Q9UGY1 213 aaKnown RBP eCLIP20.26■□□□□ 0.83
SNED1-204ENST00000401884 V9GYY5 206 aaPredicted RBP20.26■□□□□ 0.83
SNED1-204ENST00000401884 IDEP14735 1019 aa20.26■□□□□ 0.83
SNED1-204ENST00000401884 IQCEQ6IPM2 695 aa20.26■□□□□ 0.83
SNED1-204ENST00000401884 NBPF5PQ86XG9 351 aaPredicted RBP20.26■□□□□ 0.83
SNED1-204ENST00000401884 PYM1Q9BRP8 204 aaKnown RBP20.26■□□□□ 0.83
SNED1-204ENST00000401884 PLEKHG1Q9ULL1 1385 aa20.25■□□□□ 0.83
SNED1-204ENST00000401884 MBD4O95243 580 aa20.25■□□□□ 0.83
SNED1-204ENST00000401884 GNAT2P19087 354 aa20.25■□□□□ 0.83
SNED1-204ENST00000401884 CCDC12Q8WUD4 166 aaPredicted RBP20.25■□□□□ 0.83
SNED1-204ENST00000401884 ANGEL1Q9UNK9 670 aaKnown RBP20.25■□□□□ 0.83
SNED1-204ENST00000401884 FAM193AP78312 1265 aa20.25■□□□□ 0.83
SNED1-204ENST00000401884 ZFYVE27Q5T4F4 411 aa20.25■□□□□ 0.83
SNED1-204ENST00000401884 DHX58Q96C10 678 aa20.25■□□□□ 0.83
SNED1-204ENST00000401884 SPHKAPQ2M3C7 1700 aa20.25■□□□□ 0.83
SNED1-204ENST00000401884 PHKG2P15735 406 aa20.25■□□□□ 0.83
SNED1-204ENST00000401884 MTIF2P46199 727 aaKnown RBP20.25■□□□□ 0.83
SNED1-204ENST00000401884 GTF3C6Q969F1 213 aa20.25■□□□□ 0.83
SNED1-204ENST00000401884 ZKSCAN3Q9BRR0 538 aa20.25■□□□□ 0.83
SNED1-204ENST00000401884 DDB1Q16531 1140 aa20.24■□□□□ 0.83
SNED1-204ENST00000401884 SPTY2D1Q68D10 685 aaPredicted RBP20.24■□□□□ 0.83
SNED1-204ENST00000401884 CACNA2D4Q7Z3S7 1137 aa20.24■□□□□ 0.83
SNED1-204ENST00000401884 NLRP3Q96P20 1036 aa20.24■□□□□ 0.83
SNED1-204ENST00000401884 C6orf229H3BNL8 230 aa20.24■□□□□ 0.83
SNED1-204ENST00000401884 LIG1P18858 919 aa20.24■□□□□ 0.83
SNED1-204ENST00000401884 MAP4K1Q92918 833 aa20.24■□□□□ 0.83
SNED1-204ENST00000401884 PNPLA6Q8IY17 1366 aa20.24■□□□□ 0.83
SNED1-204ENST00000401884 POLR3GO15318 223 aaPredicted RBP20.24■□□□□ 0.83
SNED1-204ENST00000401884 ZNF76P36508 570 aa20.24■□□□□ 0.83
SNED1-204ENST00000401884 DNAJC10Q8IXB1 793 aa20.24■□□□□ 0.83
SNED1-204ENST00000401884 SYCP1Q15431 976 aa20.23■□□□□ 0.83
SNED1-204ENST00000401884 TMEM266Q2M3C6 531 aa20.23■□□□□ 0.83
SNED1-204ENST00000401884 ANO1Q5XXA6 986 aa20.23■□□□□ 0.83
SNED1-204ENST00000401884 RPGRQ92834 1020 aaKnown RBP20.23■□□□□ 0.83
SNED1-204ENST00000401884 TTC6Q86TZ1 520 aa20.23■□□□□ 0.83
SNED1-204ENST00000401884 ARHGEF25Q86VW2 580 aa20.23■□□□□ 0.83
SNED1-204ENST00000401884 CRACR2BQ8N4Y2 399 aaPredicted RBP20.23■□□□□ 0.83
SNED1-204ENST00000401884 MAGEB6P1A0A0J9YX57 407 aa20.23■□□□□ 0.83
SNED1-204ENST00000401884 E7EWF7 191 aa20.23■□□□□ 0.83
SNED1-204ENST00000401884 ODF2Q5BJF6 829 aa20.23■□□□□ 0.83
SNED1-204ENST00000401884 RRAGBQ5VZM2 374 aa20.23■□□□□ 0.83
SNED1-204ENST00000401884 CCDC96Q2M329 555 aa20.22■□□□□ 0.83
SNED1-204ENST00000401884 CRACR2AQ9BSW2 395 aa20.22■□□□□ 0.83
SNED1-204ENST00000401884 COPRSQ9NQ92 184 aa20.22■□□□□ 0.83
SNED1-204ENST00000401884 CPSF1Q10570 1443 aaKnown RBP20.22■□□□□ 0.83
SNED1-204ENST00000401884 H0YHG0 523 aa20.22■□□□□ 0.83
SNED1-204ENST00000401884 SLU7O95391 586 aaKnown RBP20.22■□□□□ 0.83
SNED1-204ENST00000401884 ZAP70P43403 619 aa20.22■□□□□ 0.83
SNED1-204ENST00000401884 KRI1Q8N9T8 703 aaKnown RBP20.22■□□□□ 0.83
SNED1-204ENST00000401884 DSCC1Q9BVC3 393 aa20.22■□□□□ 0.83
SNED1-204ENST00000401884 BMS1Q14692 1282 aaKnown RBP20.22■□□□□ 0.83
SNED1-204ENST00000401884 MYO6Q9UM54 1294 aa20.22■□□□□ 0.83
SNED1-204ENST00000401884 TMEM87BQ96K49 555 aa20.21■□□□□ 0.83
SNED1-204ENST00000401884 TTLL7Q6ZT98 887 aa20.21■□□□□ 0.83
SNED1-204ENST00000401884 SH3TC1Q8TE82 1336 aa20.21■□□□□ 0.83
SNED1-204ENST00000401884 PRAMEF22A3QJZ6 481 aa20.21■□□□□ 0.83
SNED1-204ENST00000401884 MYL5Q02045 173 aa20.21■□□□□ 0.83
SNED1-204ENST00000401884 ARHGAP30Q7Z6I6 1101 aaPredicted RBP20.21■□□□□ 0.83
SNED1-204ENST00000401884 ZNF75DP51815 510 aa20.21■□□□□ 0.83
SNED1-204ENST00000401884 CALML4Q96GE6 196 aa20.21■□□□□ 0.83
SNED1-204ENST00000401884 TRIM47Q96LD4 638 aa20.21■□□□□ 0.83
SNED1-204ENST00000401884 STX17P56962 302 aa20.2■□□□□ 0.82
SNED1-204ENST00000401884 AMPD3Q01432 767 aa20.2■□□□□ 0.82
SNED1-204ENST00000401884 SLF2Q8IX21 1173 aa20.2■□□□□ 0.82
SNED1-204ENST00000401884 TLR7Q9NYK1 1049 aaKnown RBP20.2■□□□□ 0.82
SNED1-204ENST00000401884 DBNLQ9UJU6 430 aaKnown RBP20.2■□□□□ 0.82
SNED1-204ENST00000401884 SETDB2Q96T68 719 aa20.2■□□□□ 0.82
SNED1-204ENST00000401884 BTG4Q9NY30 223 aa20.2■□□□□ 0.82
SNED1-204ENST00000401884 ELP1O95163 1332 aa20.2■□□□□ 0.82
SNED1-204ENST00000401884 TAF5LO75529 589 aa20.2■□□□□ 0.82
SNED1-204ENST00000401884 FGFR1OPO95684 399 aaKnown RBP20.2■□□□□ 0.82
SNED1-204ENST00000401884 SPAG1Q07617 926 aa20.2■□□□□ 0.82
SNED1-204ENST00000401884 E9PCH4 1651 aa20.2■□□□□ 0.82
SNED1-204ENST00000401884 ENOX2Q16206 610 aaKnown RBP20.19■□□□□ 0.82
SNED1-204ENST00000401884 TSG101Q99816 390 aa20.19■□□□□ 0.82
SNED1-204ENST00000401884 CTAGE1Q96RT6 745 aa20.19■□□□□ 0.82
SNED1-204ENST00000401884 USO1O60763 962 aaKnown RBP20.19■□□□□ 0.82
SNED1-204ENST00000401884 TDRD12Q587J7 1177 aaKnown RBP20.19■□□□□ 0.82
SNED1-204ENST00000401884 GOLGA6L10A6NI86 522 aa20.19■□□□□ 0.82
SNED1-204ENST00000401884 HAUS7Q99871 368 aa20.19■□□□□ 0.82
SNED1-204ENST00000401884 RMND1Q9NWS8 449 aa20.19■□□□□ 0.82
SNED1-204ENST00000401884 GLI2P10070 1586 aa20.18■□□□□ 0.82
SNED1-204ENST00000401884 TCIRG1Q13488 830 aa20.18■□□□□ 0.82
SNED1-204ENST00000401884 PUM3Q15397 648 aaKnown RBP20.18■□□□□ 0.82
SNED1-204ENST00000401884 TAF4BQ92750 862 aa20.18■□□□□ 0.82
SNED1-204ENST00000401884 CENPHQ9H3R5 247 aa20.18■□□□□ 0.82
SNED1-204ENST00000401884 TSPY3P0CV98 308 aa20.18■□□□□ 0.82
SNED1-204ENST00000401884 TSPY8P0CW00 308 aa20.18■□□□□ 0.82
SNED1-204ENST00000401884 STAT6P42226 847 aa20.18■□□□□ 0.82
SNED1-204ENST00000401884 GNAQP50148 359 aa20.18■□□□□ 0.82
SNED1-204ENST00000401884 CABP5Q9NP86 173 aa20.18■□□□□ 0.82
SNED1-204ENST00000401884 PDE8AO60658 829 aa20.18■□□□□ 0.82
Retrieved 100 of 20,778 RNA–protein pairs in 16.9 ms