RNA–Protein interactions for RNA: ENST00000400556.7

PPP4R1-203, Transcript of protein phosphatase 4 regulatory subunit 1, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene PPP4R1, Length 3,925 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPP4R1-203ENST00000400556 PRC1O43663 620 aa12.32□□□□□ -0.44
PPP4R1-203ENST00000400556 ARHGAP30Q7Z6I6 1101 aaPredicted RBP12.32□□□□□ -0.44
PPP4R1-203ENST00000400556 MYL10Q9BUA6 226 aa12.32□□□□□ -0.44
PPP4R1-203ENST00000400556 TMX1Q9H3N1 280 aa12.32□□□□□ -0.44
PPP4R1-203ENST00000400556 CWC25Q9NXE8 425 aaPredicted RBP12.32□□□□□ -0.44
PPP4R1-203ENST00000400556 FGAP02671 866 aa12.32□□□□□ -0.44
PPP4R1-203ENST00000400556 ATP1A3P13637 1013 aa12.32□□□□□ -0.44
PPP4R1-203ENST00000400556 SH3TC1Q8TE82 1336 aa12.32□□□□□ -0.44
PPP4R1-203ENST00000400556 APPP05067 770 aa12.32□□□□□ -0.44
PPP4R1-203ENST00000400556 ZAP70P43403 619 aa12.32□□□□□ -0.44
PPP4R1-203ENST00000400556 SPECC1Q5M775 1068 aa12.32□□□□□ -0.44
PPP4R1-203ENST00000400556 FMR1NBQ8N0W7 255 aaPredicted RBP12.32□□□□□ -0.44
PPP4R1-203ENST00000400556 FER1L4A9Z1Z3 1794 aa12.32□□□□□ -0.44
PPP4R1-203ENST00000400556 PALLDQ8WX93 1383 aa12.32□□□□□ -0.44
PPP4R1-203ENST00000400556 TTC39AQ5SRH9 613 aa12.31□□□□□ -0.44
PPP4R1-203ENST00000400556 NBPF11Q86T75 865 aa12.31□□□□□ -0.44
PPP4R1-203ENST00000400556 FAM177A1Q8N128 213 aaPredicted RBP12.31□□□□□ -0.44
PPP4R1-203ENST00000400556 PHKBQ93100 1093 aa12.31□□□□□ -0.44
PPP4R1-203ENST00000400556 SENP2Q9HC62 589 aa12.31□□□□□ -0.44
PPP4R1-203ENST00000400556 ST7Q9NRC1 585 aa12.31□□□□□ -0.44
PPP4R1-203ENST00000400556 CHD2O14647 1828 aaKnown RBP12.31□□□□□ -0.44
PPP4R1-203ENST00000400556 EYA2O00167 538 aa12.31□□□□□ -0.44
PPP4R1-203ENST00000400556 HMGB1P09429 215 aaKnown RBP12.31□□□□□ -0.44
PPP4R1-203ENST00000400556 PDIA4P13667 645 aaKnown RBP12.31□□□□□ -0.44
PPP4R1-203ENST00000400556 TAF7LQ5H9L4 462 aa12.31□□□□□ -0.44
PPP4R1-203ENST00000400556 DCAF5Q96JK2 942 aa12.31□□□□□ -0.44
PPP4R1-203ENST00000400556 LLPHQ9BRT6 129 aaKnown RBP12.31□□□□□ -0.44
PPP4R1-203ENST00000400556 CEP126Q9P2H0 1117 aa12.31□□□□□ -0.44
PPP4R1-203ENST00000400556 FOXP2O15409 715 aa12.31□□□□□ -0.44
PPP4R1-203ENST00000400556 CCDC82Q8N4S0 544 aa12.31□□□□□ -0.44
PPP4R1-203ENST00000400556 DSCC1Q9BVC3 393 aa12.31□□□□□ -0.44
PPP4R1-203ENST00000400556 HELLSQ9NRZ9 838 aa12.31□□□□□ -0.44
PPP4R1-203ENST00000400556 GPTP24298 496 aa12.31□□□□□ -0.44
PPP4R1-203ENST00000400556 LINC00301Q8NCQ3 95 aa12.31□□□□□ -0.44
PPP4R1-203ENST00000400556 MRFAP1L1Q96HT8 127 aa12.31□□□□□ -0.44
PPP4R1-203ENST00000400556 CTNNA3Q9UI47 895 aa12.31□□□□□ -0.44
PPP4R1-203ENST00000400556 SYT10Q6XYQ8 523 aa12.3□□□□□ -0.44
PPP4R1-203ENST00000400556 H7C1W4 665 aa12.3□□□□□ -0.44
PPP4R1-203ENST00000400556 SPTLC2O15270 562 aa12.3□□□□□ -0.44
PPP4R1-203ENST00000400556 IL15P40933 162 aaPredicted RBP12.3□□□□□ -0.44
PPP4R1-203ENST00000400556 SYNE3Q6ZMZ3 975 aa12.3□□□□□ -0.44
PPP4R1-203ENST00000400556 MICU3Q86XE3 530 aa12.3□□□□□ -0.44
PPP4R1-203ENST00000400556 CCAR2Q8N163 923 aaKnown RBP12.3□□□□□ -0.44
PPP4R1-203ENST00000400556 XAGE2Q96GT9 111 aa12.3□□□□□ -0.44
PPP4R1-203ENST00000400556 CLIC6Q96NY7 704 aa12.3□□□□□ -0.44
PPP4R1-203ENST00000400556 SALL1Q9NSC2 1324 aa12.3□□□□□ -0.44
PPP4R1-203ENST00000400556 CTAGE5O15320 804 aa12.3□□□□□ -0.44
PPP4R1-203ENST00000400556 KMT5BQ4FZB7 885 aa12.3□□□□□ -0.44
PPP4R1-203ENST00000400556 ZNF771Q7L3S4 317 aaPredicted RBP12.3□□□□□ -0.44
PPP4R1-203ENST00000400556 RALYLQ86SE5 291 aaKnown RBP12.3□□□□□ -0.44
PPP4R1-203ENST00000400556 KIAA1468Q9P260 1216 aa12.3□□□□□ -0.44
PPP4R1-203ENST00000400556 ZNF202O95125 648 aa12.29□□□□□ -0.44
PPP4R1-203ENST00000400556 SLC3A2P08195 630 aaKnown RBP12.29□□□□□ -0.44
PPP4R1-203ENST00000400556 CCDC57Q2TAC2 916 aa12.29□□□□□ -0.44
PPP4R1-203ENST00000400556 ARMCX5Q6P1M9 558 aa12.29□□□□□ -0.44
PPP4R1-203ENST00000400556 AFDNP55196 1824 aaKnown RBP12.29□□□□□ -0.44
PPP4R1-203ENST00000400556 SNAP23O00161 211 aa12.29□□□□□ -0.44
PPP4R1-203ENST00000400556 WDHD1O75717 1129 aaPredicted RBP12.29□□□□□ -0.44
PPP4R1-203ENST00000400556 ANTXR2P58335 489 aa12.29□□□□□ -0.44
PPP4R1-203ENST00000400556 GNL2Q13823 731 aaKnown RBP12.29□□□□□ -0.44
PPP4R1-203ENST00000400556 IMMTQ16891 758 aaKnown RBP12.29□□□□□ -0.44
PPP4R1-203ENST00000400556 MYSM1Q5VVJ2 828 aa12.29□□□□□ -0.44
PPP4R1-203ENST00000400556 SARM1Q6SZW1 724 aa12.29□□□□□ -0.44
PPP4R1-203ENST00000400556 PAXBP1Q9Y5B6 917 aa12.29□□□□□ -0.44
PPP4R1-203ENST00000400556 MROH7-TTC4A0A0A0MT08 1334 aa12.29□□□□□ -0.44
PPP4R1-203ENST00000400556 LAMA4Q16363 1823 aa12.29□□□□□ -0.44
PPP4R1-203ENST00000400556 ATP2B1P20020 1258 aa12.29□□□□□ -0.44
PPP4R1-203ENST00000400556 HPS5Q9UPZ3 1129 aa12.29□□□□□ -0.44
PPP4R1-203ENST00000400556 IDH1O75874 414 aaKnown RBP12.28□□□□□ -0.44
PPP4R1-203ENST00000400556 PFKFB1P16118 471 aa12.28□□□□□ -0.44
PPP4R1-203ENST00000400556 ERCC6LQ2NKX8 1250 aa12.28□□□□□ -0.44
PPP4R1-203ENST00000400556 ADALQ6DHV7 355 aa12.28□□□□□ -0.44
PPP4R1-203ENST00000400556 FBXO38Q6PIJ6 1188 aa12.28□□□□□ -0.44
PPP4R1-203ENST00000400556 DPF2Q92785 391 aa12.28□□□□□ -0.44
PPP4R1-203ENST00000400556 CCDC158Q5M9N0 1113 aa12.28□□□□□ -0.44
PPP4R1-203ENST00000400556 E4F1Q66K89 784 aaPredicted RBP12.28□□□□□ -0.44
PPP4R1-203ENST00000400556 HOMER1Q86YM7 354 aa12.28□□□□□ -0.44
PPP4R1-203ENST00000400556 FBXO18Q8NFZ0 1043 aa12.28□□□□□ -0.44
PPP4R1-203ENST00000400556 HELBQ8NG08 1087 aaPredicted RBP12.28□□□□□ -0.44
PPP4R1-203ENST00000400556 ZNF274Q96GC6 653 aaPredicted RBP12.28□□□□□ -0.44
PPP4R1-203ENST00000400556 GPAA1O43292 621 aa12.28□□□□□ -0.44
PPP4R1-203ENST00000400556 PNOCQ13519 176 aa12.28□□□□□ -0.44
PPP4R1-203ENST00000400556 NYAP1Q6ZVC0 841 aa12.28□□□□□ -0.44
PPP4R1-203ENST00000400556 NAT10Q9H0A0 1025 aaKnown RBP12.28□□□□□ -0.44
PPP4R1-203ENST00000400556 CDC25BP30305 580 aa12.27□□□□□ -0.44
PPP4R1-203ENST00000400556 TOM1L2Q6ZVM7 507 aa12.27□□□□□ -0.44
PPP4R1-203ENST00000400556 CMTR1Q8N1G2 835 aaKnown RBP12.27□□□□□ -0.44
PPP4R1-203ENST00000400556 AGXT2Q9BYV1 514 aa12.27□□□□□ -0.44
PPP4R1-203ENST00000400556 RTEL1Q9NZ71 1219 aa12.27□□□□□ -0.44
PPP4R1-203ENST00000400556 ZNF213O14771 459 aa12.27□□□□□ -0.45
PPP4R1-203ENST00000400556 STRN4Q9NRL3 753 aa12.27□□□□□ -0.45
PPP4R1-203ENST00000400556 B4E1Z4 1266 aa12.27□□□□□ -0.45
PPP4R1-203ENST00000400556 FOXN1O15353 648 aa12.27□□□□□ -0.45
PPP4R1-203ENST00000400556 SFPQP23246 707 aaKnown RBP eCLIP12.27□□□□□ -0.45
PPP4R1-203ENST00000400556 KIF18AQ8NI77 898 aa12.27□□□□□ -0.45
PPP4R1-203ENST00000400556 RBM6P78332 1123 aaKnown RBP12.26□□□□□ -0.45
PPP4R1-203ENST00000400556 EPC1Q9H2F5 836 aa12.26□□□□□ -0.45
PPP4R1-203ENST00000400556 MRC1P22897 1456 aa12.26□□□□□ -0.45
PPP4R1-203ENST00000400556 NEDD4P46934 1319 aa12.26□□□□□ -0.45
PPP4R1-203ENST00000400556 ANO1Q5XXA6 986 aa12.26□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 73.1 ms