RNA–Protein interactions for RNA: ENST00000399613.1

PAN3-202, Transcript of poly(A) specific ribonuclease subunit PAN3, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene PAN3, Length 4,940 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PAN3-202ENST00000399613 FAM161AQ3B820 660 aa6.28□□□□□ -1.4
PAN3-202ENST00000399613 DNAAF4Q8WXU2 420 aa6.28□□□□□ -1.4
PAN3-202ENST00000399613 GGA3Q9NZ52 723 aa6.28□□□□□ -1.4
PAN3-202ENST00000399613 PHF20L1A8MW92 1017 aa6.28□□□□□ -1.4
PAN3-202ENST00000399613 ITGA6P23229 1130 aa6.28□□□□□ -1.4
PAN3-202ENST00000399613 DOK7Q18PE1 504 aa6.28□□□□□ -1.4
PAN3-202ENST00000399613 NOL9Q5SY16 702 aaKnown RBP6.28□□□□□ -1.4
PAN3-202ENST00000399613 SPRYD7Q5W111 196 aa6.28□□□□□ -1.4
PAN3-202ENST00000399613 DDX55Q8NHQ9 600 aaKnown RBP eCLIP6.28□□□□□ -1.46e-6■□□□□ 9
PAN3-202ENST00000399613 SERPINA10Q9UK55 444 aa6.28□□□□□ -1.4
PAN3-202ENST00000399613 GAKO14976 1311 aa6.28□□□□□ -1.4
PAN3-202ENST00000399613 PRUNE2Q8WUY3 3088 aa6.28□□□□□ -1.4
PAN3-202ENST00000399613 NPM3O75607 178 aaKnown RBP6.28□□□□□ -1.4
PAN3-202ENST00000399613 ANGEL2Q5VTE6 544 aaKnown RBP6.28□□□□□ -1.4
PAN3-202ENST00000399613 SUCLG2Q96I99 432 aa6.28□□□□□ -1.4
PAN3-202ENST00000399613 FAM177BA6PVY3 158 aa6.27□□□□□ -1.41
PAN3-202ENST00000399613 IGF2BP3O00425 579 aaKnown RBP eCLIP6.27□□□□□ -1.41
PAN3-202ENST00000399613 SASH1O94885 1247 aa6.27□□□□□ -1.41
PAN3-202ENST00000399613 USP17L8P0C7I0 530 aa6.27□□□□□ -1.41
PAN3-202ENST00000399613 FAM163AQ96GL9 167 aaPredicted RBP6.27□□□□□ -1.41
PAN3-202ENST00000399613 SUGT1Q9Y2Z0 365 aa6.27□□□□□ -1.41
PAN3-202ENST00000399613 PTPRCP08575 1304 aa6.27□□□□□ -1.41
PAN3-202ENST00000399613 LMOD1P29536 600 aaPredicted RBP6.27□□□□□ -1.41
PAN3-202ENST00000399613 AIMP1Q12904 312 aaKnown RBP6.27□□□□□ -1.41
PAN3-202ENST00000399613 APOBEC3HQ6NTF7 200 aaKnown RBP6.27□□□□□ -1.41
PAN3-202ENST00000399613 POTEEQ6S8J3 1075 aa6.27□□□□□ -1.41
PAN3-202ENST00000399613 ZNF428Q96B54 188 aa6.27□□□□□ -1.41
PAN3-202ENST00000399613 TBC1D10BQ4KMP7 808 aaPredicted RBP6.27□□□□□ -1.41
PAN3-202ENST00000399613 EAPPQ56P03 285 aaPredicted RBP6.27□□□□□ -1.41
PAN3-202ENST00000399613 PPP1R3FQ6ZSY5 799 aaPredicted RBP6.27□□□□□ -1.41
PAN3-202ENST00000399613 ANKRD2Q9GZV1 360 aa6.27□□□□□ -1.41
PAN3-202ENST00000399613 FBXO3Q9UK99 471 aa6.27□□□□□ -1.41
PAN3-202ENST00000399613 UFL1O94874 794 aa6.26□□□□□ -1.41
PAN3-202ENST00000399613 PTPN12Q05209 780 aaKnown RBP6.26□□□□□ -1.41
PAN3-202ENST00000399613 UBE4AQ14139 1066 aa6.26□□□□□ -1.41
PAN3-202ENST00000399613 ALDH1L2Q3SY69 923 aa6.26□□□□□ -1.41
PAN3-202ENST00000399613 ANKRD18AQ8IVF6 992 aa6.26□□□□□ -1.41
PAN3-202ENST00000399613 ZDHHC15Q96MV8 337 aa6.26□□□□□ -1.41
PAN3-202ENST00000399613 GJA3Q9Y6H8 435 aa6.26□□□□□ -1.41
PAN3-202ENST00000399613 LAMA4Q16363 1823 aa6.26□□□□□ -1.41
PAN3-202ENST00000399613 HSP90B1P14625 803 aaKnown RBP6.26□□□□□ -1.41
PAN3-202ENST00000399613 PKN2Q16513 984 aaKnown RBP6.26□□□□□ -1.41
PAN3-202ENST00000399613 CDAN1Q8IWY9 1227 aa6.26□□□□□ -1.41
PAN3-202ENST00000399613 KCNH4Q9UQ05 1017 aa6.26□□□□□ -1.41
PAN3-202ENST00000399613 PLXNA1Q9UIW2 1896 aa6.26□□□□□ -1.41
PAN3-202ENST00000399613 EYSQ5T1H1 3165 aa6.26□□□□□ -1.41
PAN3-202ENST00000399613 MYH8P13535 1937 aa6.26□□□□□ -1.41
PAN3-202ENST00000399613 CIAO1O76071 339 aa6.26□□□□□ -1.41
PAN3-202ENST00000399613 NBPF7P0C2Y1 421 aaPredicted RBP6.26□□□□□ -1.41
PAN3-202ENST00000399613 MOB2Q70IA6 237 aa6.26□□□□□ -1.41
PAN3-202ENST00000399613 KRT26Q7Z3Y9 468 aa6.26□□□□□ -1.41
PAN3-202ENST00000399613 PRMT6Q96LA8 375 aaPredicted RBP6.26□□□□□ -1.41
PAN3-202ENST00000399613 H7C1D1 291 aa6.26□□□□□ -1.41
PAN3-202ENST00000399613 GRM8O00222 908 aa6.26□□□□□ -1.41
PAN3-202ENST00000399613 EXOSC9Q06265 439 aaKnown RBP6.26□□□□□ -1.41
PAN3-202ENST00000399613 GOLGA2Q08379 1002 aa6.26□□□□□ -1.41
PAN3-202ENST00000399613 IFNL1Q8IU54 200 aa6.26□□□□□ -1.41
PAN3-202ENST00000399613 NSFL1CQ9UNZ2 370 aaKnown RBP6.26□□□□□ -1.41
PAN3-202ENST00000399613 WNK4Q96J92 1243 aa6.25□□□□□ -1.41
PAN3-202ENST00000399613 HPS5Q9UPZ3 1129 aa6.25□□□□□ -1.41
PAN3-202ENST00000399613 SNAP23O00161 211 aa6.25□□□□□ -1.41
PAN3-202ENST00000399613 SLC4A2P04920 1241 aa6.25□□□□□ -1.41
PAN3-202ENST00000399613 GPAT2Q6NUI2 795 aa6.25□□□□□ -1.41
PAN3-202ENST00000399613 FAM83AQ86UY5 434 aa6.25□□□□□ -1.41
PAN3-202ENST00000399613 CHMP4AQ9BY43 222 aa6.25□□□□□ -1.41
PAN3-202ENST00000399613 ZNF330Q9Y3S2 320 aaPredicted RBP6.25□□□□□ -1.41
PAN3-202ENST00000399613 SNCAIPQ9Y6H5 919 aa6.25□□□□□ -1.41
PAN3-202ENST00000399613 APOBEC3FQ8IUX4 373 aaKnown RBP6.25□□□□□ -1.41
PAN3-202ENST00000399613 JARID2Q92833 1246 aaPredicted RBP6.25□□□□□ -1.41
PAN3-202ENST00000399613 SHISA4Q96DD7 197 aa6.25□□□□□ -1.41
PAN3-202ENST00000399613 CDC5LQ99459 802 aaKnown RBP6.25□□□□□ -1.41
PAN3-202ENST00000399613 COL6A3P12111 3177 aa6.25□□□□□ -1.41
PAN3-202ENST00000399613 MNX1P50219 401 aaPredicted RBP6.25□□□□□ -1.41
PAN3-202ENST00000399613 INTS3Q68E01 1043 aaKnown RBP6.25□□□□□ -1.41
PAN3-202ENST00000399613 SH3BP5LQ7L8J4 393 aa6.25□□□□□ -1.41
PAN3-202ENST00000399613 PCDH10Q9P2E7 1040 aa6.25□□□□□ -1.41
PAN3-202ENST00000399613 DNAH12Q6ZR08 3092 aa6.25□□□□□ -1.41
PAN3-202ENST00000399613 MROH5Q6ZUA9 1318 aa6.25□□□□□ -1.41
PAN3-202ENST00000399613 ZNF296Q8WUU4 475 aaPredicted RBP6.24□□□□□ -1.41
PAN3-202ENST00000399613 OTUD5Q96G74 571 aa6.24□□□□□ -1.41
PAN3-202ENST00000399613 PUS3Q9BZE2 481 aaKnown RBP6.24□□□□□ -1.41
PAN3-202ENST00000399613 CT47B1P0C2W7 299 aaPredicted RBP6.24□□□□□ -1.41
PAN3-202ENST00000399613 UBE3BQ7Z3V4 1068 aa6.24□□□□□ -1.41
PAN3-202ENST00000399613 RIC3Q7Z5B4 369 aa6.24□□□□□ -1.41
PAN3-202ENST00000399613 HHIPL2Q6UWX4 724 aa6.24□□□□□ -1.41
PAN3-202ENST00000399613 ARHGAP45Q92619 1136 aa6.24□□□□□ -1.41
PAN3-202ENST00000399613 RIMBP2O15034 1052 aa6.23□□□□□ -1.41
PAN3-202ENST00000399613 DDX58O95786 925 aaKnown RBP6.23□□□□□ -1.41
PAN3-202ENST00000399613 HUNKP57058 714 aa6.23□□□□□ -1.41
PAN3-202ENST00000399613 INHBEP58166 350 aa6.23□□□□□ -1.41
PAN3-202ENST00000399613 POLA2Q14181 598 aa6.23□□□□□ -1.41
PAN3-202ENST00000399613 CTU1Q7Z7A3 348 aaKnown RBP6.23□□□□□ -1.41
PAN3-202ENST00000399613 IDI2Q9BXS1 227 aa6.23□□□□□ -1.41
PAN3-202ENST00000399613 IGSF3O75054 1194 aa6.23□□□□□ -1.41
PAN3-202ENST00000399613 C17orf99Q6UX52 265 aa6.23□□□□□ -1.41
PAN3-202ENST00000399613 ZNF333Q96JL9 665 aa6.23□□□□□ -1.41
PAN3-202ENST00000399613 ZNF512BQ96KM6 892 aaPredicted RBP6.23□□□□□ -1.41
PAN3-202ENST00000399613 ZC3H12CQ9C0D7 883 aaKnown RBP6.23□□□□□ -1.41
PAN3-202ENST00000399613 SLC45A1Q9Y2W3 748 aa6.23□□□□□ -1.41
PAN3-202ENST00000399613 ZNFX1Q9P2E3 1918 aaKnown RBP6.23□□□□□ -1.41
Retrieved 100 of 20,778 RNA–protein pairs in 70 ms