RNA–Protein interactions for RNA: ENST00000399042.4

BRCC3-206, Transcript of BRCA1/BRCA2-containing complex subunit 3, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene BRCC3, Length 954 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCC3-206ENST00000399042 DBNDD1Q9H9R9 158 aa10.88□□□□□ -0.67
BRCC3-206ENST00000399042 MED23Q9ULK4 1368 aa10.88□□□□□ -0.67
BRCC3-206ENST00000399042 ZNF609O15014 1411 aa10.87□□□□□ -0.67
BRCC3-206ENST00000399042 SLX4Q8IY92 1834 aa10.87□□□□□ -0.67
BRCC3-206ENST00000399042 ECE2O60344 883 aa10.87□□□□□ -0.67
BRCC3-206ENST00000399042 GLRX3O76003 335 aaKnown RBP10.87□□□□□ -0.67
BRCC3-206ENST00000399042 LMNB1P20700 586 aa10.87□□□□□ -0.67
BRCC3-206ENST00000399042 EIF6P56537 245 aaKnown RBP10.87□□□□□ -0.67
BRCC3-206ENST00000399042 FBXO33Q7Z6M2 555 aa10.87□□□□□ -0.67
BRCC3-206ENST00000399042 TXNRD3Q86VQ6 643 aa10.87□□□□□ -0.67
BRCC3-206ENST00000399042 SNRKQ9NRH2 765 aa10.87□□□□□ -0.67
BRCC3-206ENST00000399042 RNF181Q9P0P0 153 aa10.87□□□□□ -0.67
BRCC3-206ENST00000399042 DENND2AQ9ULE3 1009 aa10.87□□□□□ -0.67
BRCC3-206ENST00000399042 JAG2Q9Y219 1238 aa10.87□□□□□ -0.67
BRCC3-206ENST00000399042 TAF1P21675 1872 aa10.87□□□□□ -0.67
BRCC3-206ENST00000399042 TTC41PQ6P2S7 1318 aa10.86□□□□□ -0.67
BRCC3-206ENST00000399042 KIF13BQ9NQT8 1826 aa10.86□□□□□ -0.67
BRCC3-206ENST00000399042 NFKBIEO00221 500 aa10.86□□□□□ -0.67
BRCC3-206ENST00000399042 MAP4K4O95819 1239 aaPredicted RBP10.86□□□□□ -0.67
BRCC3-206ENST00000399042 ATP5JP18859 108 aa10.86□□□□□ -0.67
BRCC3-206ENST00000399042 PDE1AP54750 535 aa10.86□□□□□ -0.67
BRCC3-206ENST00000399042 GSE1Q14687 1217 aa10.86□□□□□ -0.67
BRCC3-206ENST00000399042 C15orf52Q6ZUT6 534 aaKnown RBP10.86□□□□□ -0.67
BRCC3-206ENST00000399042 PODNQ7Z5L7 613 aa10.86□□□□□ -0.67
BRCC3-206ENST00000399042 RILPL2Q969X0 211 aa10.86□□□□□ -0.67
BRCC3-206ENST00000399042 CD209Q9NNX6 404 aa10.86□□□□□ -0.67
BRCC3-206ENST00000399042 LRP5O75197 1615 aa10.86□□□□□ -0.67
BRCC3-206ENST00000399042 SRCAPQ6ZRS2 3230 aa10.86□□□□□ -0.67
BRCC3-206ENST00000399042 COL4A1P02462 1669 aa10.85□□□□□ -0.67
BRCC3-206ENST00000399042 SEMA3EO15041 775 aa10.85□□□□□ -0.67
BRCC3-206ENST00000399042 PDE4AP27815 886 aa10.85□□□□□ -0.67
BRCC3-206ENST00000399042 GTF2IP78347 998 aa10.85□□□□□ -0.67
BRCC3-206ENST00000399042 C9orf131Q5VYM1 1079 aa10.85□□□□□ -0.67
BRCC3-206ENST00000399042 TTLL5Q6EMB2 1281 aa10.85□□□□□ -0.67
BRCC3-206ENST00000399042 SKAP1Q86WV1 359 aa10.85□□□□□ -0.67
BRCC3-206ENST00000399042 PLEKHM2Q8IWE5 1019 aa10.85□□□□□ -0.67
BRCC3-206ENST00000399042 SPATA5Q8NB90 893 aa10.85□□□□□ -0.67
BRCC3-206ENST00000399042 LRP2BPQ9P2M1 347 aa10.85□□□□□ -0.67
BRCC3-206ENST00000399042 ABCF2Q9UG63 623 aa10.85□□□□□ -0.67
BRCC3-206ENST00000399042 ZNRF3Q9ULT6 936 aa10.85□□□□□ -0.67
BRCC3-206ENST00000399042 GJA3Q9Y6H8 435 aa10.85□□□□□ -0.67
BRCC3-206ENST00000399042 LTBP3Q9NS15 1303 aa10.84□□□□□ -0.67
BRCC3-206ENST00000399042 SPEF2Q9C093 1822 aa10.84□□□□□ -0.67
BRCC3-206ENST00000399042 USP17L3A6NCW0 530 aa10.84□□□□□ -0.67
BRCC3-206ENST00000399042 USP17L4A6NCW7 530 aa10.84□□□□□ -0.67
BRCC3-206ENST00000399042 GOLIM4O00461 696 aa10.84□□□□□ -0.67
BRCC3-206ENST00000399042 RAD17O75943 681 aa10.84□□□□□ -0.67
BRCC3-206ENST00000399042 TNIP1Q15025 636 aa10.84□□□□□ -0.67
BRCC3-206ENST00000399042 TTF1Q15361 905 aaPredicted RBP10.84□□□□□ -0.67
BRCC3-206ENST00000399042 LRRFIP1Q32MZ4 808 aaKnown RBP10.84□□□□□ -0.67
BRCC3-206ENST00000399042 SPTY2D1Q68D10 685 aaPredicted RBP10.84□□□□□ -0.67
BRCC3-206ENST00000399042 USP17L1Q7RTZ2 530 aa10.84□□□□□ -0.67
BRCC3-206ENST00000399042 CNTROBQ8N137 903 aa10.84□□□□□ -0.67
BRCC3-206ENST00000399042 ZGPATQ8N5A5 531 aaKnown RBP10.84□□□□□ -0.67
BRCC3-206ENST00000399042 WDR66Q8TBY9 1149 aa10.84□□□□□ -0.67
BRCC3-206ENST00000399042 PHF12Q96QT6 1004 aa10.84□□□□□ -0.67
BRCC3-206ENST00000399042 RAI14Q9P0K7 980 aa10.84□□□□□ -0.67
BRCC3-206ENST00000399042 STAP2Q9UGK3 403 aa10.84□□□□□ -0.67
BRCC3-206ENST00000399042 AOX1Q06278 1338 aa10.84□□□□□ -0.67
BRCC3-206ENST00000399042 IDH1O75874 414 aaKnown RBP10.83□□□□□ -0.68
BRCC3-206ENST00000399042 IL1R1P14778 569 aa10.83□□□□□ -0.68
BRCC3-206ENST00000399042 ARID4AP29374 1257 aaPredicted RBP10.83□□□□□ -0.68
BRCC3-206ENST00000399042 MCAMP43121 646 aa10.83□□□□□ -0.68
BRCC3-206ENST00000399042 ZAP70P43403 619 aa10.83□□□□□ -0.68
BRCC3-206ENST00000399042 RASGRF1Q13972 1273 aa10.83□□□□□ -0.68
BRCC3-206ENST00000399042 CIAPIN1Q6FI81 312 aa10.83□□□□□ -0.68
BRCC3-206ENST00000399042 DPY19L2Q6NUT2 758 aa10.83□□□□□ -0.68
BRCC3-206ENST00000399042 TDRD7Q8NHU6 1098 aaKnown RBP10.83□□□□□ -0.68
BRCC3-206ENST00000399042 PPIL4Q8WUA2 492 aaKnown RBP eCLIP10.83□□□□□ -0.68
BRCC3-206ENST00000399042 TBC1D22AQ8WUA7 517 aa10.83□□□□□ -0.68
BRCC3-206ENST00000399042 ZNF512BQ96KM6 892 aaPredicted RBP10.83□□□□□ -0.68
BRCC3-206ENST00000399042 HAUS7Q99871 368 aa10.83□□□□□ -0.68
BRCC3-206ENST00000399042 FSD1Q9BTV5 496 aa10.83□□□□□ -0.68
BRCC3-206ENST00000399042 DDX24Q9GZR7 859 aaKnown RBP eCLIP10.83□□□□□ -0.68
BRCC3-206ENST00000399042 PAG1Q9NWQ8 432 aa10.83□□□□□ -0.68
BRCC3-206ENST00000399042 HMG20BQ9P0W2 317 aa10.83□□□□□ -0.68
BRCC3-206ENST00000399042 NDUFB9Q9Y6M9 179 aa10.83□□□□□ -0.68
BRCC3-206ENST00000399042 CACNA1SQ13698 1873 aa10.83□□□□□ -0.68
BRCC3-206ENST00000399042 F8W031 263 aaPredicted RBP10.82□□□□□ -0.68
BRCC3-206ENST00000399042 LDHBP07195 334 aaKnown RBP10.82□□□□□ -0.68
BRCC3-206ENST00000399042 MAP3K12Q12852 859 aa10.82□□□□□ -0.68
BRCC3-206ENST00000399042 SCARF1Q14162 830 aa10.82□□□□□ -0.68
BRCC3-206ENST00000399042 MFSD14BQ5SR56 506 aa10.82□□□□□ -0.68
BRCC3-206ENST00000399042 TTC22Q5TAA0 569 aa10.82□□□□□ -0.68
BRCC3-206ENST00000399042 CASC1Q6TDU7 716 aa10.82□□□□□ -0.68
BRCC3-206ENST00000399042 PI16Q6UXB8 463 aa10.82□□□□□ -0.68
BRCC3-206ENST00000399042 TBC1D9Q6ZT07 1266 aa10.82□□□□□ -0.68
BRCC3-206ENST00000399042 ERICH6Q7L0X2 663 aa10.82□□□□□ -0.68
BRCC3-206ENST00000399042 DZIP1Q86YF9 867 aaKnown RBP10.82□□□□□ -0.68
BRCC3-206ENST00000399042 DLEC1Q9Y238 1755 aa10.82□□□□□ -0.68
BRCC3-206ENST00000399042 RBM5P52756 815 aaKnown RBP eCLIP10.81□□□□□ -0.68
BRCC3-206ENST00000399042 STRIP1Q5VSL9 837 aa10.81□□□□□ -0.68
BRCC3-206ENST00000399042 ZSCAN25Q6NSZ9 544 aa10.81□□□□□ -0.68
BRCC3-206ENST00000399042 OGFOD1Q8N543 542 aa10.81□□□□□ -0.68
BRCC3-206ENST00000399042 PI4K2BQ8TCG2 481 aa10.81□□□□□ -0.68
BRCC3-206ENST00000399042 EVI5LQ96CN4 794 aa10.81□□□□□ -0.68
BRCC3-206ENST00000399042 NOL10Q9BSC4 688 aaKnown RBP10.81□□□□□ -0.68
BRCC3-206ENST00000399042 OSBPL3Q9H4L5 887 aa10.81□□□□□ -0.68
BRCC3-206ENST00000399042 KCNQ5Q9NR82 932 aa10.81□□□□□ -0.68
BRCC3-206ENST00000399042 HDAC9Q9UKV0 1011 aa10.81□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 42.4 ms