RNA–Protein interactions for RNA: ENST00000396268.7

CCHCR1-203, Transcript of coiled-coil alpha-helical rod protein 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CCHCR1, Length 2,958 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCHCR1-203ENST00000396268 APOBRQ0VD83 1088 aa16.44■□□□□ 0.22
CCHCR1-203ENST00000396268 ARID5BQ14865 1188 aa16.44■□□□□ 0.22
CCHCR1-203ENST00000396268 HLFQ16534 295 aa16.44■□□□□ 0.22
CCHCR1-203ENST00000396268 TPD52L1Q16890 204 aaPredicted RBP16.44■□□□□ 0.22
CCHCR1-203ENST00000396268 ANKRD7Q92527 254 aa16.44■□□□□ 0.22
CCHCR1-203ENST00000396268 ERICH4A6NGS2 130 aa16.44■□□□□ 0.22
CCHCR1-203ENST00000396268 KIF20AO95235 890 aa16.44■□□□□ 0.22
CCHCR1-203ENST00000396268 RFX5P48382 616 aaPredicted RBP16.44■□□□□ 0.22
CCHCR1-203ENST00000396268 VPS72Q15906 364 aa16.44■□□□□ 0.22
CCHCR1-203ENST00000396268 CCAR1Q8IX12 1150 aaKnown RBP16.44■□□□□ 0.22
CCHCR1-203ENST00000396268 FNBP4Q8N3X1 1017 aaPredicted RBP16.44■□□□□ 0.22
CCHCR1-203ENST00000396268 CDCA7Q9BWT1 371 aaPredicted RBP16.44■□□□□ 0.22
CCHCR1-203ENST00000396268 GOLIM4O00461 696 aa16.43■□□□□ 0.22
CCHCR1-203ENST00000396268 STOX1Q6ZVD7 989 aa16.43■□□□□ 0.22
CCHCR1-203ENST00000396268 SMIM5Q71RC9 77 aa16.43■□□□□ 0.22
CCHCR1-203ENST00000396268 SYNE4Q8N205 404 aa16.43■□□□□ 0.22
CCHCR1-203ENST00000396268 BECN2A8MW95 431 aa16.43■□□□□ 0.22
CCHCR1-203ENST00000396268 CACTINQ8WUQ7 758 aaKnown RBP16.43■□□□□ 0.22
CCHCR1-203ENST00000396268 STARD3NLO95772 234 aa16.42■□□□□ 0.22
CCHCR1-203ENST00000396268 CASP7P55210 303 aa16.42■□□□□ 0.22
CCHCR1-203ENST00000396268 CCDC144BQ3MJ40 725 aa16.42■□□□□ 0.22
CCHCR1-203ENST00000396268 MEX3CQ5U5Q3 659 aaKnown RBP16.42■□□□□ 0.22
CCHCR1-203ENST00000396268 LMBR1LQ6UX01 489 aa16.42■□□□□ 0.22
CCHCR1-203ENST00000396268 CCDC73Q6ZRK6 1079 aa16.42■□□□□ 0.22
CCHCR1-203ENST00000396268 CCDC144CPQ8IYA2 1237 aa16.42■□□□□ 0.22
CCHCR1-203ENST00000396268 TRERF1Q96PN7 1200 aa16.42■□□□□ 0.22
CCHCR1-203ENST00000396268 HAUS7Q99871 368 aa16.42■□□□□ 0.22
CCHCR1-203ENST00000396268 NCOA5Q9HCD5 579 aaKnown RBP16.42■□□□□ 0.22
CCHCR1-203ENST00000396268 TRMT1Q9NXH9 659 aaKnown RBP16.42■□□□□ 0.22
CCHCR1-203ENST00000396268 TBC1D2BQ9UPU7 963 aa16.42■□□□□ 0.22
CCHCR1-203ENST00000396268 PTPDC1A2A3K4 754 aa16.42■□□□□ 0.22
CCHCR1-203ENST00000396268 ITPK1Q13572 414 aa16.42■□□□□ 0.22
CCHCR1-203ENST00000396268 C11orf57Q6ZUT1 292 aaPredicted RBP16.42■□□□□ 0.22
CCHCR1-203ENST00000396268 CHST3Q7LGC8 479 aa16.42■□□□□ 0.22
CCHCR1-203ENST00000396268 ARHGAP30Q7Z6I6 1101 aaPredicted RBP16.42■□□□□ 0.22
CCHCR1-203ENST00000396268 GPTP24298 496 aa16.41■□□□□ 0.22
CCHCR1-203ENST00000396268 DHX32Q7L7V1 743 aaKnown RBP16.41■□□□□ 0.22
CCHCR1-203ENST00000396268 NSUN7Q8NE18 718 aaKnown RBP16.41■□□□□ 0.22
CCHCR1-203ENST00000396268 NUP188Q5SRE5 1749 aa16.41■□□□□ 0.22
CCHCR1-203ENST00000396268 KBTBD3Q8NAB2 608 aa16.41■□□□□ 0.22
CCHCR1-203ENST00000396268 ERCC4Q92889 916 aaPredicted RBP16.41■□□□□ 0.22
CCHCR1-203ENST00000396268 KINO60870 393 aaKnown RBP16.41■□□□□ 0.22
CCHCR1-203ENST00000396268 ATP6V1AP38606 617 aa16.41■□□□□ 0.22
CCHCR1-203ENST00000396268 ME1P48163 572 aa16.41■□□□□ 0.22
CCHCR1-203ENST00000396268 CCDC112Q8NEF3 446 aa16.41■□□□□ 0.22
CCHCR1-203ENST00000396268 CCDC85AQ96PX6 553 aaPredicted RBP16.41■□□□□ 0.22
CCHCR1-203ENST00000396268 USP28Q96RU2 1077 aa16.41■□□□□ 0.22
CCHCR1-203ENST00000396268 ST7Q9NRC1 585 aa16.41■□□□□ 0.22
CCHCR1-203ENST00000396268 PFKFB2O60825 505 aa16.4■□□□□ 0.22
CCHCR1-203ENST00000396268 TIMM10P62072 90 aa16.4■□□□□ 0.22
CCHCR1-203ENST00000396268 FILIP1Q7Z7B0 1213 aa16.4■□□□□ 0.22
CCHCR1-203ENST00000396268 CTIFO43310 598 aaKnown RBP16.4■□□□□ 0.22
CCHCR1-203ENST00000396268 HMGB1P09429 215 aaKnown RBP16.4■□□□□ 0.22
CCHCR1-203ENST00000396268 SMARCC2Q8TAQ2 1214 aa16.4■□□□□ 0.22
CCHCR1-203ENST00000396268 GOLPH3LQ9H4A5 285 aa16.4■□□□□ 0.22
CCHCR1-203ENST00000396268 A0A0G2JLW4 131 aa16.39■□□□□ 0.21
CCHCR1-203ENST00000396268 USP27XA6NNY8 438 aa16.39■□□□□ 0.21
CCHCR1-203ENST00000396268 CAVIN2O95810 425 aa16.39■□□□□ 0.21
CCHCR1-203ENST00000396268 STX1AQ16623 288 aa16.39■□□□□ 0.21
CCHCR1-203ENST00000396268 LLPHQ9BRT6 129 aaKnown RBP16.39■□□□□ 0.21
CCHCR1-203ENST00000396268 CWC25Q9NXE8 425 aaPredicted RBP16.39■□□□□ 0.21
CCHCR1-203ENST00000396268 CTNNA3Q9UI47 895 aa16.39■□□□□ 0.21
CCHCR1-203ENST00000396268 LOC102724428A0A0B4J2F2 783 aa16.39■□□□□ 0.21
CCHCR1-203ENST00000396268 SIK1P57059 783 aa16.39■□□□□ 0.21
CCHCR1-203ENST00000396268 FAM89AQ96GI7 184 aa16.39■□□□□ 0.21
CCHCR1-203ENST00000396268 PAG1Q9NWQ8 432 aa16.39■□□□□ 0.21
CCHCR1-203ENST00000396268 OGFRQ9NZT2 677 aa16.39■□□□□ 0.21
CCHCR1-203ENST00000396268 AFF2P51816 1311 aa16.38■□□□□ 0.21
CCHCR1-203ENST00000396268 CTDNEP1O95476 244 aa16.38■□□□□ 0.21
CCHCR1-203ENST00000396268 ADD1P35611 737 aaKnown RBP16.38■□□□□ 0.21
CCHCR1-203ENST00000396268 IQCB1Q15051 598 aa16.38■□□□□ 0.21
CCHCR1-203ENST00000396268 RABL6Q3YEC7 729 aaPredicted RBP16.38■□□□□ 0.21
CCHCR1-203ENST00000396268 SPATA31A6Q5VVP1 1343 aa16.38■□□□□ 0.21
CCHCR1-203ENST00000396268 TJP1Q07157 1748 aa16.38■□□□□ 0.21
CCHCR1-203ENST00000396268 H7C1W4 665 aa16.38■□□□□ 0.21
CCHCR1-203ENST00000396268 FOXO4P98177 505 aa16.38■□□□□ 0.21
CCHCR1-203ENST00000396268 NAA16Q6N069 864 aaPredicted RBP16.38■□□□□ 0.21
CCHCR1-203ENST00000396268 FSIP1Q8NA03 581 aa16.38■□□□□ 0.21
CCHCR1-203ENST00000396268 TEX13AQ9BXU3 409 aaPredicted RBP16.38■□□□□ 0.21
CCHCR1-203ENST00000396268 RCOR1Q9UKL0 485 aa16.38■□□□□ 0.21
CCHCR1-203ENST00000396268 SMTNL1A8MU46 457 aa16.38■□□□□ 0.21
CCHCR1-203ENST00000396268 CTAGE5O15320 804 aa16.38■□□□□ 0.21
CCHCR1-203ENST00000396268 INTS5Q6P9B9 1019 aaKnown RBP16.38■□□□□ 0.21
CCHCR1-203ENST00000396268 ZNF396Q96N95 335 aaPredicted RBP16.38■□□□□ 0.21
CCHCR1-203ENST00000396268 TCIRG1Q13488 830 aa16.37■□□□□ 0.21
CCHCR1-203ENST00000396268 PALLDQ8WX93 1383 aa16.37■□□□□ 0.21
CCHCR1-203ENST00000396268 GTF2E1P29083 439 aaPredicted RBP16.37■□□□□ 0.21
CCHCR1-203ENST00000396268 CRKLP46109 303 aaKnown RBP16.37■□□□□ 0.21
CCHCR1-203ENST00000396268 KIF6Q6ZMV9 814 aa16.37■□□□□ 0.21
CCHCR1-203ENST00000396268 LRRC8AQ8IWT6 810 aa16.37■□□□□ 0.21
CCHCR1-203ENST00000396268 ZNF594Q96JF6 807 aaPredicted RBP16.37■□□□□ 0.21
CCHCR1-203ENST00000396268 SDF4Q9BRK5 362 aa16.37■□□□□ 0.21
CCHCR1-203ENST00000396268 E7EWF7 191 aa16.36■□□□□ 0.21
CCHCR1-203ENST00000396268 ISCA1Q9BUE6 129 aa16.36■□□□□ 0.21
CCHCR1-203ENST00000396268 SH3TC1Q8TE82 1336 aa16.36■□□□□ 0.21
CCHCR1-203ENST00000396268 HSPD1P10809 573 aaKnown RBP16.36■□□□□ 0.21
CCHCR1-203ENST00000396268 SNW1Q13573 536 aaKnown RBP16.36■□□□□ 0.21
CCHCR1-203ENST00000396268 MAP3K15Q6ZN16 1313 aa16.36■□□□□ 0.21
CCHCR1-203ENST00000396268 SKILP12757 684 aa16.35■□□□□ 0.21
CCHCR1-203ENST00000396268 FAM160A1Q05DH4 1040 aa16.35■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 20.7 ms