RNA–Protein interactions for RNA: ENST00000395795.5

CXCL12-206, Transcript of C-X-C motif chemokine ligand 12, humanhuman

TSL 5 BASIC

Gene CXCL12, Length 404 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CXCL12-206ENST00000395795 SMC4Q9NTJ3 1288 aa20.4■□□□□ 0.86
CXCL12-206ENST00000395795 TSKSQ9UJT2 592 aa20.4■□□□□ 0.86
CXCL12-206ENST00000395795 FAM205AQ6ZU69 1335 aa20.39■□□□□ 0.85
CXCL12-206ENST00000395795 SLC10A3P09131 477 aa20.39■□□□□ 0.85
CXCL12-206ENST00000395795 CT47B1P0C2W7 299 aaPredicted RBP20.39■□□□□ 0.85
CXCL12-206ENST00000395795 GYG1P46976 350 aa20.39■□□□□ 0.85
CXCL12-206ENST00000395795 FKBP1AP62942 108 aaKnown RBP20.39■□□□□ 0.85
CXCL12-206ENST00000395795 TAF7LQ5H9L4 462 aa20.39■□□□□ 0.85
CXCL12-206ENST00000395795 ZNF804AQ7Z570 1209 aa20.39■□□□□ 0.85
CXCL12-206ENST00000395795 MTMR14Q8NCE2 650 aa20.39■□□□□ 0.85
CXCL12-206ENST00000395795 JAG2Q9Y219 1238 aa20.39■□□□□ 0.85
CXCL12-206ENST00000395795 NOB1Q9ULX3 412 aaKnown RBP20.38■□□□□ 0.85
CXCL12-206ENST00000395795 RARSP54136 660 aaKnown RBP20.37■□□□□ 0.85
CXCL12-206ENST00000395795 FKBP1BP68106 108 aa20.37■□□□□ 0.85
CXCL12-206ENST00000395795 FBXO33Q7Z6M2 555 aa20.37■□□□□ 0.85
CXCL12-206ENST00000395795 RASAL3Q86YV0 1011 aa20.37■□□□□ 0.85
CXCL12-206ENST00000395795 MROH5Q6ZUA9 1318 aa20.36■□□□□ 0.85
CXCL12-206ENST00000395795 ZNF157P51786 506 aaPredicted RBP20.36■□□□□ 0.85
CXCL12-206ENST00000395795 KIF23Q02241 960 aaPredicted RBP20.36■□□□□ 0.85
CXCL12-206ENST00000395795 GRIK5Q16478 980 aa20.36■□□□□ 0.85
CXCL12-206ENST00000395795 SSC5DA1L4H1 1573 aa20.35■□□□□ 0.85
CXCL12-206ENST00000395795 CAPN15O75808 1086 aa20.35■□□□□ 0.85
CXCL12-206ENST00000395795 FGFR2P21802 821 aa20.35■□□□□ 0.85
CXCL12-206ENST00000395795 CCDC102AQ96A19 550 aa20.35■□□□□ 0.85
CXCL12-206ENST00000395795 PRMT6Q96LA8 375 aaPredicted RBP20.35■□□□□ 0.85
CXCL12-206ENST00000395795 SPDYE2BA6NHP3 402 aa20.34■□□□□ 0.85
CXCL12-206ENST00000395795 F8W031 263 aaPredicted RBP20.34■□□□□ 0.85
CXCL12-206ENST00000395795 UBE2Q2LH0YL09 131 aa20.34■□□□□ 0.85
CXCL12-206ENST00000395795 PDE8BO95263 885 aa20.34■□□□□ 0.85
CXCL12-206ENST00000395795 SPDYE6P0CI01 402 aa20.34■□□□□ 0.85
CXCL12-206ENST00000395795 HIBADHP31937 336 aaKnown RBP20.34■□□□□ 0.85
CXCL12-206ENST00000395795 PTPN12Q05209 780 aaKnown RBP20.34■□□□□ 0.85
CXCL12-206ENST00000395795 CFAP100Q494V2 611 aa20.34■□□□□ 0.85
CXCL12-206ENST00000395795 CSRNP1Q96S65 589 aa20.34■□□□□ 0.85
CXCL12-206ENST00000395795 HDAC9Q9UKV0 1011 aa20.34■□□□□ 0.85
CXCL12-206ENST00000395795 CA12O43570 354 aa20.33■□□□□ 0.85
CXCL12-206ENST00000395795 ATG9AQ7Z3C6 839 aa20.33■□□□□ 0.85
CXCL12-206ENST00000395795 BEGAINQ9BUH8 593 aa20.33■□□□□ 0.85
CXCL12-206ENST00000395795 DLGAP5Q15398 846 aa20.32■□□□□ 0.84
CXCL12-206ENST00000395795 APOBEC3FQ8IUX4 373 aaKnown RBP20.32■□□□□ 0.84
CXCL12-206ENST00000395795 ARAP2Q8WZ64 1704 aa20.32■□□□□ 0.84
CXCL12-206ENST00000395795 ECM29Q5VYK3 1845 aa20.32■□□□□ 0.84
CXCL12-206ENST00000395795 METTL24Q5JXM2 366 aa20.31■□□□□ 0.84
CXCL12-206ENST00000395795 MFSD14BQ5SR56 506 aa20.31■□□□□ 0.84
CXCL12-206ENST00000395795 LDLRAD1Q5T700 205 aa20.31■□□□□ 0.84
CXCL12-206ENST00000395795 MIER1Q8N108 512 aa20.31■□□□□ 0.84
CXCL12-206ENST00000395795 DEFB129Q9H1M3 183 aa20.31■□□□□ 0.84
CXCL12-206ENST00000395795 FZD1Q9UP38 647 aa20.31■□□□□ 0.84
CXCL12-206ENST00000395795 TNNQ9UQP3 1299 aa20.31■□□□□ 0.84
CXCL12-206ENST00000395795 EYA2O00167 538 aa20.3■□□□□ 0.84
CXCL12-206ENST00000395795 MEIS3Q99687 375 aa20.3■□□□□ 0.84
CXCL12-206ENST00000395795 RNF186Q9NXI6 227 aa20.3■□□□□ 0.84
CXCL12-206ENST00000395795 IQSEC3Q9UPP2 1182 aaPredicted RBP20.3■□□□□ 0.84
CXCL12-206ENST00000395795 CASP8AP2Q9UKL3 1982 aa20.3■□□□□ 0.84
CXCL12-206ENST00000395795 COL1A1P02452 1464 aaPredicted RBP20.3■□□□□ 0.84
CXCL12-206ENST00000395795 CLRN2A0PK11 232 aa20.29■□□□□ 0.84
CXCL12-206ENST00000395795 BCAMP50895 628 aa20.29■□□□□ 0.84
CXCL12-206ENST00000395795 ARHGAP45Q92619 1136 aa20.29■□□□□ 0.84
CXCL12-206ENST00000395795 API5Q9BZZ5 524 aaKnown RBP20.29■□□□□ 0.84
CXCL12-206ENST00000395795 KIF16BQ96L93 1317 aa20.28■□□□□ 0.84
CXCL12-206ENST00000395795 MAP3K11Q16584 847 aa20.28■□□□□ 0.84
CXCL12-206ENST00000395795 INTS3Q68E01 1043 aaKnown RBP20.28■□□□□ 0.84
CXCL12-206ENST00000395795 SAGE1Q9NXZ1 904 aa20.28■□□□□ 0.84
CXCL12-206ENST00000395795 LRRFIP2Q9Y608 721 aaKnown RBP20.28■□□□□ 0.84
CXCL12-206ENST00000395795 UBTFL1P0CB47 393 aaPredicted RBP20.27■□□□□ 0.84
CXCL12-206ENST00000395795 SPDYE2Q495Y8 402 aa20.27■□□□□ 0.84
CXCL12-206ENST00000395795 ABHD8Q96I13 439 aa20.27■□□□□ 0.84
CXCL12-206ENST00000395795 SERPINA10Q9UK55 444 aa20.27■□□□□ 0.84
CXCL12-206ENST00000395795 TTF2Q9UNY4 1162 aaKnown RBP20.27■□□□□ 0.84
CXCL12-206ENST00000395795 BCAR3O75815 825 aa20.26■□□□□ 0.83
CXCL12-206ENST00000395795 PUM3Q15397 648 aaKnown RBP20.26■□□□□ 0.83
CXCL12-206ENST00000395795 CDAN1Q8IWY9 1227 aa20.26■□□□□ 0.83
CXCL12-206ENST00000395795 TRPA1O75762 1119 aa20.25■□□□□ 0.83
CXCL12-206ENST00000395795 CIAO1O76071 339 aa20.25■□□□□ 0.83
CXCL12-206ENST00000395795 TRIM27P14373 513 aa20.25■□□□□ 0.83
CXCL12-206ENST00000395795 PRKG1Q13976 671 aa20.25■□□□□ 0.83
CXCL12-206ENST00000395795 NBPF12Q5TAG4 269 aaPredicted RBP20.25■□□□□ 0.83
CXCL12-206ENST00000395795 TEPSINQ96N21 525 aa20.25■□□□□ 0.83
CXCL12-206ENST00000395795 ZNF70Q9UC06 446 aaPredicted RBP20.25■□□□□ 0.83
CXCL12-206ENST00000395795 PA2G4Q9UQ80 394 aaKnown RBP20.25■□□□□ 0.83
CXCL12-206ENST00000395795 PPP2R3BQ9Y5P8 575 aa20.25■□□□□ 0.83
CXCL12-206ENST00000395795 RASA3Q14644 834 aa20.24■□□□□ 0.83
CXCL12-206ENST00000395795 DZIP1LQ8IYY4 767 aaKnown RBP20.24■□□□□ 0.83
CXCL12-206ENST00000395795 TDRD3Q9H7E2 651 aaKnown RBP20.24■□□□□ 0.83
CXCL12-206ENST00000395795 FBXO3Q9UK99 471 aa20.24■□□□□ 0.83
CXCL12-206ENST00000395795 NF2P35240 595 aa20.23■□□□□ 0.83
CXCL12-206ENST00000395795 CRKP46108 304 aa20.23■□□□□ 0.83
CXCL12-206ENST00000395795 CHAF1AQ13111 956 aaPredicted RBP20.23■□□□□ 0.83
CXCL12-206ENST00000395795 TTLL12Q14166 644 aaPredicted RBP20.23■□□□□ 0.83
CXCL12-206ENST00000395795 LPIN2Q92539 896 aa20.23■□□□□ 0.83
CXCL12-206ENST00000395795 CLMNQ96JQ2 1002 aa20.23■□□□□ 0.83
CXCL12-206ENST00000395795 COPRSQ9NQ92 184 aa20.23■□□□□ 0.83
CXCL12-206ENST00000395795 ANGEL1Q9UNK9 670 aaKnown RBP20.23■□□□□ 0.83
CXCL12-206ENST00000395795 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP20.23■□□□□ 0.83
CXCL12-206ENST00000395795 AKAP11Q9UKA4 1901 aa20.22■□□□□ 0.83
CXCL12-206ENST00000395795 TM4SF4P48230 202 aa20.22■□□□□ 0.83
CXCL12-206ENST00000395795 HDLBPQ00341 1268 aaKnown RBP20.22■□□□□ 0.83
CXCL12-206ENST00000395795 MTX1Q13505 466 aa20.22■□□□□ 0.83
CXCL12-206ENST00000395795 CAVIN4Q5BKX8 364 aa20.22■□□□□ 0.83
CXCL12-206ENST00000395795 ARMC9Q7Z3E5 817 aa20.22■□□□□ 0.83
Retrieved 100 of 20,778 RNA–protein pairs in 37.6 ms