RNA–Protein interactions for RNA: ENST00000394986.5

SNCA-203, Transcript of synuclein alpha, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SNCA, Length 1,420 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Synapse .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNCA-203ENST00000394986 COL1A1P02452 1464 aaPredicted RBP24.57■■□□□ 1.52
SNCA-203ENST00000394986 TNNI3KQ59H18 835 aa24.57■■□□□ 1.52
SNCA-203ENST00000394986 SAMD7Q7Z3H4 446 aa24.57■■□□□ 1.52
SNCA-203ENST00000394986 FPGT-TNNI3KV9GXZ4 949 aa24.57■■□□□ 1.52
SNCA-203ENST00000394986 FAM205AQ6ZU69 1335 aa24.56■■□□□ 1.52
SNCA-203ENST00000394986 ARAP2Q8WZ64 1704 aa24.56■■□□□ 1.52
SNCA-203ENST00000394986 H7C1D1 291 aa24.56■■□□□ 1.52
SNCA-203ENST00000394986 TBC1D10BQ4KMP7 808 aaPredicted RBP24.56■■□□□ 1.52
SNCA-203ENST00000394986 CCDC102BQ68D86 513 aa24.56■■□□□ 1.52
SNCA-203ENST00000394986 RBM46Q8TBY0 533 aaKnown RBP24.56■■□□□ 1.52
SNCA-203ENST00000394986 RBM26Q5T8P6 1007 aaKnown RBP24.55■■□□□ 1.52
SNCA-203ENST00000394986 PNMA8AQ86V59 439 aaPredicted RBP24.55■■□□□ 1.52
SNCA-203ENST00000394986 ERC1Q8IUD2 1116 aa24.55■■□□□ 1.52
SNCA-203ENST00000394986 KIAA0825Q8IV33 1275 aa24.55■■□□□ 1.52
SNCA-203ENST00000394986 IL1RAPL2Q9NP60 686 aa24.55■■□□□ 1.52
SNCA-203ENST00000394986 GPR108Q9NPR9 543 aa24.55■■□□□ 1.52
SNCA-203ENST00000394986 MYO3BQ8WXR4 1341 aa24.55■■□□□ 1.52
SNCA-203ENST00000394986 USP17L8P0C7I0 530 aa24.54■■□□□ 1.52
SNCA-203ENST00000394986 HIRAP54198 1017 aaPredicted RBP24.54■■□□□ 1.52
SNCA-203ENST00000394986 HSP90AB4PQ58FF6 505 aa24.54■■□□□ 1.52
SNCA-203ENST00000394986 RHPN1Q8TCX5 695 aa24.54■■□□□ 1.52
SNCA-203ENST00000394986 DBNDD2Q9BQY9 259 aa24.54■■□□□ 1.52
SNCA-203ENST00000394986 BCL11AQ9H165 835 aa24.54■■□□□ 1.52
SNCA-203ENST00000394986 CLEC11AQ9Y240 323 aa24.54■■□□□ 1.52
SNCA-203ENST00000394986 F8W031 263 aaPredicted RBP24.53■■□□□ 1.52
SNCA-203ENST00000394986 ZNF280AP59817 542 aaPredicted RBP24.53■■□□□ 1.52
SNCA-203ENST00000394986 MFSD14BQ5SR56 506 aa24.53■■□□□ 1.52
SNCA-203ENST00000394986 USP50Q70EL3 339 aaPredicted RBP24.53■■□□□ 1.52
SNCA-203ENST00000394986 LDHDQ86WU2 507 aa24.53■■□□□ 1.52
SNCA-203ENST00000394986 EAF2Q96CJ1 260 aaPredicted RBP24.53■■□□□ 1.52
SNCA-203ENST00000394986 TLR7Q9NYK1 1049 aaKnown RBP24.53■■□□□ 1.52
SNCA-203ENST00000394986 C1QTNF8P60827 252 aa24.52■■□□□ 1.52
SNCA-203ENST00000394986 GRIK5Q16478 980 aa24.52■■□□□ 1.52
SNCA-203ENST00000394986 GORABQ5T7V8 394 aa24.52■■□□□ 1.52
SNCA-203ENST00000394986 CCDC8Q9H0W5 538 aaPredicted RBP24.52■■□□□ 1.52
SNCA-203ENST00000394986 ADAMTSL1Q8N6G6 1762 aa24.52■■□□□ 1.52
SNCA-203ENST00000394986 SMC1BQ8NDV3 1235 aa24.52■■□□□ 1.52
SNCA-203ENST00000394986 GNL3LQ9NVN8 582 aaKnown RBP24.52■■□□□ 1.52
SNCA-203ENST00000394986 FKBP1AP62942 108 aaKnown RBP24.51■■□□□ 1.51
SNCA-203ENST00000394986 RASGRF1Q13972 1273 aa24.51■■□□□ 1.51
SNCA-203ENST00000394986 KIF4BQ2VIQ3 1234 aa24.51■■□□□ 1.51
SNCA-203ENST00000394986 MAP1SQ66K74 1059 aaPredicted RBP24.51■■□□□ 1.51
SNCA-203ENST00000394986 CHADLQ6NUI6 762 aa24.51■■□□□ 1.51
SNCA-203ENST00000394986 KIF1BPQ96EK5 621 aa24.51■■□□□ 1.51
SNCA-203ENST00000394986 MYOZ2Q9NPC6 264 aa24.51■■□□□ 1.51
SNCA-203ENST00000394986 DBNLQ9UJU6 430 aaKnown RBP24.51■■□□□ 1.51
SNCA-203ENST00000394986 AACSQ86V21 672 aa24.5■■□□□ 1.51
SNCA-203ENST00000394986 RAB11FIP3O75154 756 aa24.49■■□□□ 1.51
SNCA-203ENST00000394986 OGFOD1Q8N543 542 aa24.49■■□□□ 1.51
SNCA-203ENST00000394986 ASTN2O75129 1339 aaPredicted RBP24.49■■□□□ 1.51
SNCA-203ENST00000394986 SMARCA5O60264 1052 aaPredicted RBP24.48■■□□□ 1.51
SNCA-203ENST00000394986 SCARF1Q14162 830 aa24.48■■□□□ 1.51
SNCA-203ENST00000394986 PI16Q6UXB8 463 aa24.48■■□□□ 1.51
SNCA-203ENST00000394986 DCTPP1Q9H773 170 aa24.48■■□□□ 1.51
SNCA-203ENST00000394986 FSTL1Q12841 308 aa24.47■■□□□ 1.51
SNCA-203ENST00000394986 TBC1D22AQ8WUA7 517 aa24.47■■□□□ 1.51
SNCA-203ENST00000394986 HDAC9Q9UKV0 1011 aa24.47■■□□□ 1.51
SNCA-203ENST00000394986 DENND2AQ9ULE3 1009 aa24.47■■□□□ 1.51
SNCA-203ENST00000394986 PCDHAC2Q9Y5I4 1007 aa24.47■■□□□ 1.51
SNCA-203ENST00000394986 SEMA3EO15041 775 aa24.46■■□□□ 1.51
SNCA-203ENST00000394986 ARID4AP29374 1257 aaPredicted RBP24.46■■□□□ 1.51
SNCA-203ENST00000394986 TTC39AQ5SRH9 613 aa24.46■■□□□ 1.51
SNCA-203ENST00000394986 TTF2Q9UNY4 1162 aaKnown RBP24.46■■□□□ 1.51
SNCA-203ENST00000394986 MCAMP43121 646 aa24.45■■□□□ 1.51
SNCA-203ENST00000394986 AAMPQ13685 434 aa24.45■■□□□ 1.51
SNCA-203ENST00000394986 CLASRPQ8N2M8 674 aaKnown RBP24.45■■□□□ 1.51
SNCA-203ENST00000394986 WDR66Q8TBY9 1149 aa24.45■■□□□ 1.51
SNCA-203ENST00000394986 LRRCC1Q9C099 1032 aa24.45■■□□□ 1.51
SNCA-203ENST00000394986 HMG20BQ9P0W2 317 aa24.45■■□□□ 1.51
SNCA-203ENST00000394986 NBPF9Q3BBW0 867 aa24.44■■□□□ 1.5
SNCA-203ENST00000394986 CCDC158Q5M9N0 1113 aa24.44■■□□□ 1.5
SNCA-203ENST00000394986 CNTROBQ8N137 903 aa24.44■■□□□ 1.5
SNCA-203ENST00000394986 SNRKQ9NRH2 765 aa24.44■■□□□ 1.5
SNCA-203ENST00000394986 GGA3Q9NZ52 723 aa24.44■■□□□ 1.5
SNCA-203ENST00000394986 WNT10BO00744 389 aa24.43■■□□□ 1.5
SNCA-203ENST00000394986 UQCRFS1P1P0C7P4 283 aa24.43■■□□□ 1.5
SNCA-203ENST00000394986 PRDX5P30044 214 aa24.43■■□□□ 1.5
SNCA-203ENST00000394986 HDAC1Q13547 482 aaPredicted RBP24.43■■□□□ 1.5
SNCA-203ENST00000394986 CFAP100Q494V2 611 aa24.43■■□□□ 1.5
SNCA-203ENST00000394986 SPATA5Q8NB90 893 aa24.43■■□□□ 1.5
SNCA-203ENST00000394986 PGAP2Q9UHJ9 254 aa24.43■■□□□ 1.5
SNCA-203ENST00000394986 ZBTB22O15209 634 aa24.42■■□□□ 1.5
SNCA-203ENST00000394986 IFIT2P09913 472 aaKnown RBP24.42■■□□□ 1.5
SNCA-203ENST00000394986 FMR1Q06787 632 aaKnown RBP eCLIP24.42■■□□□ 1.5
SNCA-203ENST00000394986 ZC3H15Q8WU90 426 aaKnown RBP24.42■■□□□ 1.5
SNCA-203ENST00000394986 AOX1Q06278 1338 aa24.42■■□□□ 1.5
SNCA-203ENST00000394986 MYH13Q9UKX3 1938 aa24.42■■□□□ 1.5
SNCA-203ENST00000394986 PDS5AQ29RF7 1337 aaKnown RBP24.41■■□□□ 1.5
SNCA-203ENST00000394986 SALL1Q9NSC2 1324 aa24.41■■□□□ 1.5
SNCA-203ENST00000394986 ITGBL1O95965 494 aaPredicted RBP24.41■■□□□ 1.5
SNCA-203ENST00000394986 RBM5P52756 815 aaKnown RBP eCLIP24.41■■□□□ 1.5
SNCA-203ENST00000394986 DLGAP5Q15398 846 aa24.41■■□□□ 1.5
SNCA-203ENST00000394986 ANGEL2Q5VTE6 544 aaKnown RBP24.41■■□□□ 1.5
SNCA-203ENST00000394986 DLK2Q6UY11 383 aa24.41■■□□□ 1.5
SNCA-203ENST00000394986 ZBED3Q96IU2 234 aaPredicted RBP24.41■■□□□ 1.5
SNCA-203ENST00000394986 GLIS2Q9BZE0 524 aaPredicted RBP24.41■■□□□ 1.5
SNCA-203ENST00000394986 SCAF8Q9UPN6 1271 aaKnown RBP24.41■■□□□ 1.5
SNCA-203ENST00000394986 TRAF5O00463 557 aa24.4■■□□□ 1.5
SNCA-203ENST00000394986 MMP14P50281 582 aa24.4■■□□□ 1.5
SNCA-203ENST00000394986 TBC1D9Q6ZT07 1266 aa24.4■■□□□ 1.5
Retrieved 100 of 20,778 RNA–protein pairs in 120.9 ms