RNA–Protein interactions for RNA: ENST00000394440.7

CCT4-201, Transcript of chaperonin containing TCP1 subunit 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CCT4, Length 2,520 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCT4-201ENST00000394440 COL1A1P02452 1464 aaPredicted RBP17.86■□□□□ 0.45
CCT4-201ENST00000394440 WTIPA6NIX2 430 aaPredicted RBP17.86■□□□□ 0.45
CCT4-201ENST00000394440 PDE6AP16499 860 aa17.86■□□□□ 0.45
CCT4-201ENST00000394440 ZNF827Q17R98 1081 aa17.86■□□□□ 0.45
CCT4-201ENST00000394440 CLEC17AQ6ZS10 378 aa17.86■□□□□ 0.45
CCT4-201ENST00000394440 WWC3Q9ULE0 1092 aa17.86■□□□□ 0.45
CCT4-201ENST00000394440 IDH1O75874 414 aaKnown RBP17.85■□□□□ 0.45
CCT4-201ENST00000394440 ANKRD31Q8N7Z5 1873 aa17.85■□□□□ 0.45
CCT4-201ENST00000394440 GPAA1O43292 621 aa17.84■□□□□ 0.45
CCT4-201ENST00000394440 APBA3O96018 575 aa17.84■□□□□ 0.45
CCT4-201ENST00000394440 PKP1Q13835 747 aa17.84■□□□□ 0.45
CCT4-201ENST00000394440 STOX1Q6ZVD7 989 aa17.84■□□□□ 0.45
CCT4-201ENST00000394440 LARGE1O95461 756 aa17.84■□□□□ 0.45
CCT4-201ENST00000394440 SERPINB2P05120 415 aa17.84■□□□□ 0.45
CCT4-201ENST00000394440 DDR1Q08345 913 aa17.84■□□□□ 0.45
CCT4-201ENST00000394440 CRY2Q49AN0 593 aa17.84■□□□□ 0.45
CCT4-201ENST00000394440 NEK1Q96PY6 1258 aa17.84■□□□□ 0.45
CCT4-201ENST00000394440 ZNF532Q9HCE3 1301 aa17.84■□□□□ 0.45
CCT4-201ENST00000394440 NPHP1O15259 732 aa17.83■□□□□ 0.45
CCT4-201ENST00000394440 ZSCAN31Q96LW9 406 aaPredicted RBP17.83■□□□□ 0.45
CCT4-201ENST00000394440 ANKRD2Q9GZV1 360 aa17.83■□□□□ 0.45
CCT4-201ENST00000394440 CACNA1SQ13698 1873 aa17.83■□□□□ 0.45
CCT4-201ENST00000394440 GYG1P46976 350 aa17.83■□□□□ 0.44
CCT4-201ENST00000394440 GRAPQ13588 217 aa17.83■□□□□ 0.44
CCT4-201ENST00000394440 GRAPLQ8TC17 118 aaPredicted RBP17.83■□□□□ 0.44
CCT4-201ENST00000394440 SH2B1Q9NRF2 756 aaPredicted RBP17.83■□□□□ 0.44
CCT4-201ENST00000394440 IRS2Q9Y4H2 1338 aa17.83■□□□□ 0.44
CCT4-201ENST00000394440 A0A0G2JLW4 131 aa17.82■□□□□ 0.44
CCT4-201ENST00000394440 POLRMTO00411 1230 aaKnown RBP17.82■□□□□ 0.44
CCT4-201ENST00000394440 TOB2Q14106 344 aaPredicted RBP17.82■□□□□ 0.44
CCT4-201ENST00000394440 FAM84BQ96KN1 310 aaPredicted RBP17.82■□□□□ 0.44
CCT4-201ENST00000394440 LARP6Q9BRS8 491 aaKnown RBP17.82■□□□□ 0.44
CCT4-201ENST00000394440 ZDHHC9Q9Y397 364 aa17.82■□□□□ 0.44
CCT4-201ENST00000394440 ZBTB22O15209 634 aa17.82■□□□□ 0.44
CCT4-201ENST00000394440 ST3GAL1Q11201 340 aa17.81■□□□□ 0.44
CCT4-201ENST00000394440 MAP3K12Q12852 859 aa17.81■□□□□ 0.44
CCT4-201ENST00000394440 ANKRD1Q15327 319 aa17.81■□□□□ 0.44
CCT4-201ENST00000394440 FBXO33Q7Z6M2 555 aa17.81■□□□□ 0.44
CCT4-201ENST00000394440 LRRC37AA6NMS7 1700 aa17.81■□□□□ 0.44
CCT4-201ENST00000394440 ST5P78524 1137 aa17.81■□□□□ 0.44
CCT4-201ENST00000394440 ME3Q16798 604 aa17.81■□□□□ 0.44
CCT4-201ENST00000394440 TTLL5Q6EMB2 1281 aa17.81■□□□□ 0.44
CCT4-201ENST00000394440 TCEANC2Q96MN5 208 aa17.81■□□□□ 0.44
CCT4-201ENST00000394440 TPCN1Q9ULQ1 816 aa17.81■□□□□ 0.44
CCT4-201ENST00000394440 FGAP02671 866 aa17.8■□□□□ 0.44
CCT4-201ENST00000394440 KLRK1P26718 216 aa17.8■□□□□ 0.44
CCT4-201ENST00000394440 CAVIN4Q5BKX8 364 aa17.8■□□□□ 0.44
CCT4-201ENST00000394440 GBP4Q96PP9 640 aa17.8■□□□□ 0.44
CCT4-201ENST00000394440 GNL3LQ9NVN8 582 aaKnown RBP17.8■□□□□ 0.44
CCT4-201ENST00000394440 CTNNA3Q9UI47 895 aa17.8■□□□□ 0.44
CCT4-201ENST00000394440 TFCP2L1Q9NZI6 479 aa17.8■□□□□ 0.44
CCT4-201ENST00000394440 CHD4Q14839 1912 aa17.8■□□□□ 0.44
CCT4-201ENST00000394440 PDS5AQ29RF7 1337 aaKnown RBP17.8■□□□□ 0.44
CCT4-201ENST00000394440 E7EWF7 191 aa17.79■□□□□ 0.44
CCT4-201ENST00000394440 HMGB1P09429 215 aaKnown RBP17.79■□□□□ 0.44
CCT4-201ENST00000394440 COL23A1Q86Y22 540 aaPredicted RBP17.79■□□□□ 0.44
CCT4-201ENST00000394440 MAGEB6Q8N7X4 407 aa17.79■□□□□ 0.44
CCT4-201ENST00000394440 MAST2Q6P0Q8 1798 aa17.79■□□□□ 0.44
CCT4-201ENST00000394440 KLRG2A4D1S0 409 aaPredicted RBP17.79■□□□□ 0.44
CCT4-201ENST00000394440 SEMA3EO15041 775 aa17.79■□□□□ 0.44
CCT4-201ENST00000394440 EN1Q05925 392 aaPredicted RBP17.79■□□□□ 0.44
CCT4-201ENST00000394440 IQSEC3Q9UPP2 1182 aaPredicted RBP17.79■□□□□ 0.44
CCT4-201ENST00000394440 SRCAPQ6ZRS2 3230 aa17.79■□□□□ 0.44
CCT4-201ENST00000394440 LTBP1Q14766 1721 aa17.79■□□□□ 0.44
CCT4-201ENST00000394440 DDX11L8A8MPP1 907 aa17.78■□□□□ 0.44
CCT4-201ENST00000394440 BRD1O95696 1058 aa17.78■□□□□ 0.44
CCT4-201ENST00000394440 STRBPQ96SI9 672 aaKnown RBP17.78■□□□□ 0.44
CCT4-201ENST00000394440 DENND2AQ9ULE3 1009 aa17.78■□□□□ 0.44
CCT4-201ENST00000394440 ZSCAN21Q9Y5A6 473 aaPredicted RBP17.78■□□□□ 0.44
CCT4-201ENST00000394440 QSER1Q2KHR3 1735 aa17.78■□□□□ 0.44
CCT4-201ENST00000394440 KIAA1551Q9HCM1 1747 aa17.78■□□□□ 0.44
CCT4-201ENST00000394440 EXOSC10Q01780 885 aaKnown RBP17.78■□□□□ 0.44
CCT4-201ENST00000394440 AGXT2Q9BYV1 514 aa17.78■□□□□ 0.44
CCT4-201ENST00000394440 ZMYM6O95789 1325 aa17.78■□□□□ 0.44
CCT4-201ENST00000394440 CCDC88AQ3V6T2 1871 aa17.78■□□□□ 0.44
CCT4-201ENST00000394440 IMMTQ16891 758 aaKnown RBP17.77■□□□□ 0.44
CCT4-201ENST00000394440 DHX32Q7L7V1 743 aaKnown RBP17.77■□□□□ 0.44
CCT4-201ENST00000394440 SLC51AQ86UW1 340 aa17.77■□□□□ 0.44
CCT4-201ENST00000394440 BAG4O95429 457 aaKnown RBP17.77■□□□□ 0.44
CCT4-201ENST00000394440 HOXA10P31260 410 aaPredicted RBP17.77■□□□□ 0.44
CCT4-201ENST00000394440 TIAM2Q8IVF5 1701 aa17.77■□□□□ 0.44
CCT4-201ENST00000394440 CCDC83Q8IWF9 413 aa17.77■□□□□ 0.44
CCT4-201ENST00000394440 FLAD1Q8NFF5 587 aa17.77■□□□□ 0.44
CCT4-201ENST00000394440 RPGRQ92834 1020 aaKnown RBP17.77■□□□□ 0.44
CCT4-201ENST00000394440 PNPLA7Q6ZV29 1317 aa17.76■□□□□ 0.43
CCT4-201ENST00000394440 NLGN1Q8N2Q7 840 aa17.76■□□□□ 0.43
CCT4-201ENST00000394440 AIDAQ96BJ3 306 aa17.76■□□□□ 0.43
CCT4-201ENST00000394440 ALX1Q15699 326 aa17.76■□□□□ 0.43
CCT4-201ENST00000394440 Q6ZUG5 572 aa17.76■□□□□ 0.43
CCT4-201ENST00000394440 VPS37DQ86XT2 251 aa17.76■□□□□ 0.43
CCT4-201ENST00000394440 LRP2BPQ9P2M1 347 aa17.76■□□□□ 0.43
CCT4-201ENST00000394440 LEMD3Q9Y2U8 911 aa17.76■□□□□ 0.43
CCT4-201ENST00000394440 XDHP47989 1333 aa17.75■□□□□ 0.43
CCT4-201ENST00000394440 COL11A2P13942 1736 aaPredicted RBP17.75■□□□□ 0.43
CCT4-201ENST00000394440 HIBADHP31937 336 aaKnown RBP17.75■□□□□ 0.43
CCT4-201ENST00000394440 TXNRD3Q86VQ6 643 aa17.75■□□□□ 0.43
CCT4-201ENST00000394440 MBD4O95243 580 aa17.75■□□□□ 0.43
CCT4-201ENST00000394440 FBXL16Q8N461 479 aa17.75■□□□□ 0.43
CCT4-201ENST00000394440 NBPF3Q9H094 633 aa17.75■□□□□ 0.43
CCT4-201ENST00000394440 HAND2P61296 217 aa17.74■□□□□ 0.43
Retrieved 100 of 20,778 RNA–protein pairs in 70 ms