RNA–Protein interactions for RNA: ENST00000394180.6

CLDND1-202, Transcript of claudin domain containing 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CLDND1, Length 2,228 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLDND1-202ENST00000394180 KDM6AO15550 1401 aaPredicted RBP25.24■■□□□ 1.63
CLDND1-202ENST00000394180 ADCY9O60503 1353 aa25.23■■□□□ 1.63
CLDND1-202ENST00000394180 SMC2O95347 1197 aa25.23■■□□□ 1.63
CLDND1-202ENST00000394180 ZKSCAN1P17029 563 aaPredicted RBP25.23■■□□□ 1.63
CLDND1-202ENST00000394180 GYS2P54840 703 aa25.23■■□□□ 1.63
CLDND1-202ENST00000394180 FAM107BQ9H098 131 aa25.23■■□□□ 1.63
CLDND1-202ENST00000394180 KIF1CO43896 1103 aaKnown RBP25.22■■□□□ 1.63
CLDND1-202ENST00000394180 TEFQ10587 303 aa25.22■■□□□ 1.63
CLDND1-202ENST00000394180 HOMER1Q86YM7 354 aa25.22■■□□□ 1.63
CLDND1-202ENST00000394180 FNBP4Q8N3X1 1017 aaPredicted RBP25.22■■□□□ 1.63
CLDND1-202ENST00000394180 PACS2Q86VP3 889 aa25.22■■□□□ 1.63
CLDND1-202ENST00000394180 PARP3Q9Y6F1 533 aa25.22■■□□□ 1.63
CLDND1-202ENST00000394180 SPATA31A5Q5VU36 1347 aa25.22■■□□□ 1.63
CLDND1-202ENST00000394180 SPATA31A7Q8IWB4 1347 aa25.22■■□□□ 1.63
CLDND1-202ENST00000394180 PCDH11XQ9BZA7 1347 aa25.22■■□□□ 1.63
CLDND1-202ENST00000394180 PCDH11YQ9BZA8 1340 aa25.22■■□□□ 1.63
CLDND1-202ENST00000394180 ARMCX5Q6P1M9 558 aa25.21■■□□□ 1.63
CLDND1-202ENST00000394180 SSH3Q8TE77 659 aa25.21■■□□□ 1.63
CLDND1-202ENST00000394180 ZCCHC17Q9NP64 241 aaKnown RBP25.21■■□□□ 1.63
CLDND1-202ENST00000394180 DISP2A7MBM2 1401 aa25.21■■□□□ 1.63
CLDND1-202ENST00000394180 POTEB2H3BUK9 544 aa25.21■■□□□ 1.63
CLDND1-202ENST00000394180 ZSCAN12O43309 604 aa25.21■■□□□ 1.63
CLDND1-202ENST00000394180 SEC31AO94979 1220 aaKnown RBP25.21■■□□□ 1.63
CLDND1-202ENST00000394180 NECTIN1Q15223 517 aa25.21■■□□□ 1.63
CLDND1-202ENST00000394180 EFCAB13Q8IY85 973 aa25.21■■□□□ 1.63
CLDND1-202ENST00000394180 USP21Q9UK80 565 aa25.21■■□□□ 1.63
CLDND1-202ENST00000394180 CEP83Q9Y592 693 aa25.21■■□□□ 1.63
CLDND1-202ENST00000394180 EIF3CLB5ME19 914 aaKnown RBP25.2■■□□□ 1.62
CLDND1-202ENST00000394180 EIF3CQ99613 913 aaKnown RBP25.2■■□□□ 1.62
CLDND1-202ENST00000394180 CCDC172P0C7W6 258 aa25.2■■□□□ 1.62
CLDND1-202ENST00000394180 MAP3K9P80192 1104 aa25.2■■□□□ 1.62
CLDND1-202ENST00000394180 MCTP2Q6DN12 878 aa25.2■■□□□ 1.62
CLDND1-202ENST00000394180 MMS22LQ6ZRQ5 1243 aa25.2■■□□□ 1.62
CLDND1-202ENST00000394180 TPCN1Q9ULQ1 816 aa25.2■■□□□ 1.62
CLDND1-202ENST00000394180 SHANK3Q9BYB0 1731 aa25.19■■□□□ 1.62
CLDND1-202ENST00000394180 PNMA6EA0A0J9YXQ4 647 aa25.19■■□□□ 1.62
CLDND1-202ENST00000394180 RESTQ13127 1097 aa25.19■■□□□ 1.62
CLDND1-202ENST00000394180 CARD6Q9BX69 1037 aa25.19■■□□□ 1.62
CLDND1-202ENST00000394180 EIF3JO75822 258 aaKnown RBP25.18■■□□□ 1.62
CLDND1-202ENST00000394180 TSGA10IPQ3SY00 556 aa25.18■■□□□ 1.62
CLDND1-202ENST00000394180 FERMT3Q86UX7 667 aa25.18■■□□□ 1.62
CLDND1-202ENST00000394180 RCOR1Q9UKL0 485 aa25.18■■□□□ 1.62
CLDND1-202ENST00000394180 KCNQ3O43525 872 aa25.18■■□□□ 1.62
CLDND1-202ENST00000394180 APPP05067 770 aa25.18■■□□□ 1.62
CLDND1-202ENST00000394180 DCAF5Q96JK2 942 aa25.18■■□□□ 1.62
CLDND1-202ENST00000394180 TMX1Q9H3N1 280 aa25.18■■□□□ 1.62
CLDND1-202ENST00000394180 TFIP11Q9UBB9 837 aaKnown RBP25.18■■□□□ 1.62
CLDND1-202ENST00000394180 ZRSR1Q15695 479 aaKnown RBP25.17■■□□□ 1.62
CLDND1-202ENST00000394180 LARP6Q9BRS8 491 aaKnown RBP25.17■■□□□ 1.62
CLDND1-202ENST00000394180 BTBD11A6QL63 1104 aa25.17■■□□□ 1.62
CLDND1-202ENST00000394180 URI1O94763 535 aaPredicted RBP25.17■■□□□ 1.62
CLDND1-202ENST00000394180 CCDC73Q6ZRK6 1079 aa25.17■■□□□ 1.62
CLDND1-202ENST00000394180 ZBTB9Q96C00 473 aa25.17■■□□□ 1.62
CLDND1-202ENST00000394180 TACO1Q9BSH4 297 aaKnown RBP25.17■■□□□ 1.62
CLDND1-202ENST00000394180 UTP14AQ9BVJ6 771 aaKnown RBP25.17■■□□□ 1.62
CLDND1-202ENST00000394180 SNRKQ9NRH2 765 aa25.17■■□□□ 1.62
CLDND1-202ENST00000394180 DONSONQ9NYP3 566 aa25.17■■□□□ 1.62
CLDND1-202ENST00000394180 CACNA1FO60840 1977 aa25.16■■□□□ 1.62
CLDND1-202ENST00000394180 ADAMTS7Q9UKP4 1686 aa25.16■■□□□ 1.62
CLDND1-202ENST00000394180 SCN11AQ9UI33 1791 aa25.16■■□□□ 1.62
CLDND1-202ENST00000394180 SRGAP3O43295 1099 aa25.16■■□□□ 1.62
CLDND1-202ENST00000394180 KINO60870 393 aaKnown RBP25.16■■□□□ 1.62
CLDND1-202ENST00000394180 USP5P45974 858 aa25.16■■□□□ 1.62
CLDND1-202ENST00000394180 FAM160A1Q05DH4 1040 aa25.16■■□□□ 1.62
CLDND1-202ENST00000394180 LONRF2Q1L5Z9 754 aa25.16■■□□□ 1.62
CLDND1-202ENST00000394180 GOLGA1Q92805 767 aa25.16■■□□□ 1.62
CLDND1-202ENST00000394180 MYO1BO43795 1136 aa25.15■■□□□ 1.62
CLDND1-202ENST00000394180 GLRX3O76003 335 aaKnown RBP25.15■■□□□ 1.62
CLDND1-202ENST00000394180 TUBBP07437 444 aa25.15■■□□□ 1.62
CLDND1-202ENST00000394180 TXLNAP40222 546 aa25.15■■□□□ 1.62
CLDND1-202ENST00000394180 APOBRQ0VD83 1088 aa25.15■■□□□ 1.62
CLDND1-202ENST00000394180 ADCK5Q3MIX3 580 aa25.15■■□□□ 1.62
CLDND1-202ENST00000394180 FAM173BQ6P4H8 233 aa25.15■■□□□ 1.62
CLDND1-202ENST00000394180 THRAP3Q9Y2W1 955 aaKnown RBP25.15■■□□□ 1.62
CLDND1-202ENST00000394180 AFF2P51816 1311 aa25.15■■□□□ 1.62
CLDND1-202ENST00000394180 POLA2Q14181 598 aa25.14■■□□□ 1.62
CLDND1-202ENST00000394180 VPS72Q15906 364 aa25.14■■□□□ 1.62
CLDND1-202ENST00000394180 FAM98CQ17RN3 349 aaKnown RBP25.14■■□□□ 1.62
CLDND1-202ENST00000394180 HSP90AB4PQ58FF6 505 aa25.14■■□□□ 1.62
CLDND1-202ENST00000394180 AOPEPQ8N6M6 819 aa25.14■■□□□ 1.62
CLDND1-202ENST00000394180 ENGASEQ8NFI3 743 aa25.14■■□□□ 1.62
CLDND1-202ENST00000394180 PARD6BQ9BYG5 372 aa25.14■■□□□ 1.62
CLDND1-202ENST00000394180 SLC52A2Q9HAB3 445 aa25.14■■□□□ 1.62
CLDND1-202ENST00000394180 MRFAP1Q9Y605 127 aa25.14■■□□□ 1.62
CLDND1-202ENST00000394180 SLC4A10Q6U841 1118 aa25.14■■□□□ 1.61
CLDND1-202ENST00000394180 HDXQ7Z353 690 aa25.14■■□□□ 1.61
CLDND1-202ENST00000394180 NECAB1Q8N987 351 aa25.14■■□□□ 1.61
CLDND1-202ENST00000394180 A0A087WUV0 522 aaPredicted RBP25.13■■□□□ 1.61
CLDND1-202ENST00000394180 EXOC5O00471 708 aa25.13■■□□□ 1.61
CLDND1-202ENST00000394180 TUBB2AQ13885 445 aa25.13■■□□□ 1.61
CLDND1-202ENST00000394180 TMC6Q7Z403 805 aa25.13■■□□□ 1.61
CLDND1-202ENST00000394180 TUBB2BQ9BVA1 445 aa25.13■■□□□ 1.61
CLDND1-202ENST00000394180 MYH15Q9Y2K3 1946 aa25.13■■□□□ 1.61
CLDND1-202ENST00000394180 HIP1O00291 1037 aa25.13■■□□□ 1.61
CLDND1-202ENST00000394180 CPA1P15085 419 aa25.13■■□□□ 1.61
CLDND1-202ENST00000394180 PRPF40BQ6NWY9 871 aaKnown RBP25.13■■□□□ 1.61
CLDND1-202ENST00000394180 MED4Q9NPJ6 270 aa25.13■■□□□ 1.61
CLDND1-202ENST00000394180 WNK3Q9BYP7 1800 aa25.13■■□□□ 1.61
CLDND1-202ENST00000394180 CCDC196A0A1B0GTZ2 297 aa25.12■■□□□ 1.61
CLDND1-202ENST00000394180 H3BQF6 201 aa25.12■■□□□ 1.61
Retrieved 100 of 20,778 RNA–protein pairs in 32.7 ms