RNA–Protein interactions for RNA: ENST00000390488.1

TRAJ49-201, Transcript of T cell receptor alpha joining 49, humanhuman

APPRIS P1 BASIC

Gene TRAJ49, Length 56 nt, Biotype TR J gene.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAJ49-201ENST00000390488 IP6K1Q92551 441 aa2.29□□□□□ -2.04
TRAJ49-201ENST00000390488 CCDC47Q96A33 483 aaKnown RBP2.29□□□□□ -2.04
TRAJ49-201ENST00000390488 FERMT2Q96AC1 680 aa2.29□□□□□ -2.04
TRAJ49-201ENST00000390488 PHACTR3Q96KR7 559 aa2.29□□□□□ -2.04
TRAJ49-201ENST00000390488 C16orf45Q96MC5 204 aaPredicted RBP2.29□□□□□ -2.04
TRAJ49-201ENST00000390488 ANKRD27Q96NW4 1050 aa2.29□□□□□ -2.04
TRAJ49-201ENST00000390488 PANX2Q96RD6 677 aa2.29□□□□□ -2.04
TRAJ49-201ENST00000390488 HAUS7Q99871 368 aa2.29□□□□□ -2.04
TRAJ49-201ENST00000390488 SDF4Q9BRK5 362 aa2.29□□□□□ -2.04
TRAJ49-201ENST00000390488 FSD1Q9BTV5 496 aa2.29□□□□□ -2.04
TRAJ49-201ENST00000390488 NUP58Q9BVL2 599 aa2.29□□□□□ -2.04
TRAJ49-201ENST00000390488 MOV10L1Q9BXT6 1211 aaKnown RBP2.29□□□□□ -2.04
TRAJ49-201ENST00000390488 TEX13AQ9BXU3 409 aaPredicted RBP2.29□□□□□ -2.04
TRAJ49-201ENST00000390488 FAM129AQ9BZQ8 928 aa2.29□□□□□ -2.04
TRAJ49-201ENST00000390488 NUCKS1Q9H1E3 243 aaKnown RBP2.29□□□□□ -2.04
TRAJ49-201ENST00000390488 CUEDC2Q9H467 287 aa2.29□□□□□ -2.04
TRAJ49-201ENST00000390488 RNF41Q9H4P4 317 aaPredicted RBP2.29□□□□□ -2.04
TRAJ49-201ENST00000390488 GEMIN8Q9NWZ8 242 aaKnown RBP2.29□□□□□ -2.04
TRAJ49-201ENST00000390488 PODXL2Q9NZ53 605 aa2.29□□□□□ -2.04
TRAJ49-201ENST00000390488 KIAA1468Q9P260 1216 aa2.29□□□□□ -2.04
TRAJ49-201ENST00000390488 TUBE1Q9UJT0 475 aa2.29□□□□□ -2.04
TRAJ49-201ENST00000390488 GGA2Q9UJY4 613 aa2.29□□□□□ -2.04
TRAJ49-201ENST00000390488 MYO6Q9UM54 1294 aa2.29□□□□□ -2.04
TRAJ49-201ENST00000390488 EXOC6BQ9Y2D4 811 aa2.29□□□□□ -2.04
TRAJ49-201ENST00000390488 RBM8AQ9Y5S9 174 aaKnown RBP2.29□□□□□ -2.04
TRAJ49-201ENST00000390488 LRRFIP2Q9Y608 721 aaKnown RBP2.29□□□□□ -2.04
TRAJ49-201ENST00000390488 PEAK1Q9H792 1746 aa2.28□□□□□ -2.04
TRAJ49-201ENST00000390488 MEGF6O75095 1541 aa2.28□□□□□ -2.04
TRAJ49-201ENST00000390488 C1orf167Q5SNV9 1468 aa2.28□□□□□ -2.04
TRAJ49-201ENST00000390488 C10orf71Q711Q0 1435 aa2.28□□□□□ -2.04
TRAJ49-201ENST00000390488 CPDO75976 1380 aa2.28□□□□□ -2.04
TRAJ49-201ENST00000390488 METP08581 1390 aa2.28□□□□□ -2.04
TRAJ49-201ENST00000390488 RTL9Q8NET4 1388 aa2.28□□□□□ -2.04
TRAJ49-201ENST00000390488 PDS5AQ29RF7 1337 aaKnown RBP2.28□□□□□ -2.04
TRAJ49-201ENST00000390488 A0A1B0GUA9 196 aa2.28□□□□□ -2.04
TRAJ49-201ENST00000390488 A0A1W2PQC6 194 aa2.28□□□□□ -2.04
TRAJ49-201ENST00000390488 ANKRD18BA2A2Z9 1011 aa2.28□□□□□ -2.04
TRAJ49-201ENST00000390488 CTAGE15A4D2H0 777 aa2.28□□□□□ -2.04
TRAJ49-201ENST00000390488 hCG_1984214I3L0E3 225 aa2.28□□□□□ -2.04
TRAJ49-201ENST00000390488 SLC27A2O14975 620 aa2.28□□□□□ -2.04
TRAJ49-201ENST00000390488 SPTLC2O15270 562 aa2.28□□□□□ -2.04
TRAJ49-201ENST00000390488 CUTAO60888 179 aa2.28□□□□□ -2.04
TRAJ49-201ENST00000390488 TADA3O75528 432 aa2.28□□□□□ -2.04
TRAJ49-201ENST00000390488 ZRANB2O95218 330 aaKnown RBP eCLIP2.28□□□□□ -2.04
TRAJ49-201ENST00000390488 FGFR1OPO95684 399 aaKnown RBP2.28□□□□□ -2.04
TRAJ49-201ENST00000390488 CPP00450 1065 aa2.28□□□□□ -2.04
TRAJ49-201ENST00000390488 SLC3A2P08195 630 aaKnown RBP2.28□□□□□ -2.04
TRAJ49-201ENST00000390488 CTAGE8P0CG41 777 aa2.28□□□□□ -2.04
TRAJ49-201ENST00000390488 CALM1P0DP23 149 aa2.28□□□□□ -2.04
TRAJ49-201ENST00000390488 CALM2P0DP24 149 aa2.28□□□□□ -2.04
TRAJ49-201ENST00000390488 CALM3P0DP25 149 aa2.28□□□□□ -2.04
TRAJ49-201ENST00000390488 PRLRP16471 622 aa2.28□□□□□ -2.04
TRAJ49-201ENST00000390488 EEF1GP26641 437 aaKnown RBP2.28□□□□□ -2.04
TRAJ49-201ENST00000390488 TNFRSF8P28908 595 aa2.28□□□□□ -2.04
TRAJ49-201ENST00000390488 HOXC9P31274 260 aa2.28□□□□□ -2.04
TRAJ49-201ENST00000390488 ACTN2P35609 894 aa2.28□□□□□ -2.04
TRAJ49-201ENST00000390488 LIFRP42702 1097 aa2.28□□□□□ -2.04
TRAJ49-201ENST00000390488 TNNT3P45378 269 aaPredicted RBP2.28□□□□□ -2.04
TRAJ49-201ENST00000390488 ME1P48163 572 aa2.28□□□□□ -2.04
TRAJ49-201ENST00000390488 AARSP49588 968 aaKnown RBP eCLIP2.28□□□□□ -2.04
TRAJ49-201ENST00000390488 NLRP12P59046 1061 aa2.28□□□□□ -2.04
TRAJ49-201ENST00000390488 EIF4A1P60842 406 aaKnown RBP2.28□□□□□ -2.04
TRAJ49-201ENST00000390488 KRT83P78385 493 aa2.28□□□□□ -2.04
TRAJ49-201ENST00000390488 CCZ1BP86790 482 aa2.28□□□□□ -2.04
TRAJ49-201ENST00000390488 CCZ1P86791 482 aaPredicted RBP2.28□□□□□ -2.04
TRAJ49-201ENST00000390488 CDK17Q00537 523 aa2.28□□□□□ -2.04
TRAJ49-201ENST00000390488 DNM1Q05193 864 aaKnown RBP2.28□□□□□ -2.04
TRAJ49-201ENST00000390488 IFFO1Q0D2I5 559 aa2.28□□□□□ -2.04
TRAJ49-201ENST00000390488 RESTQ13127 1097 aa2.28□□□□□ -2.04
TRAJ49-201ENST00000390488 PPFIA1Q13136 1202 aa2.28□□□□□ -2.04
TRAJ49-201ENST00000390488 TRIM28Q13263 835 aaKnown RBP2.28□□□□□ -2.04
TRAJ49-201ENST00000390488 NNTQ13423 1086 aa2.28□□□□□ -2.04
TRAJ49-201ENST00000390488 STIM1Q13586 685 aa2.28□□□□□ -2.04
TRAJ49-201ENST00000390488 PKP1Q13835 747 aa2.28□□□□□ -2.04
TRAJ49-201ENST00000390488 DCTN1Q14203 1278 aa2.28□□□□□ -2.04
TRAJ49-201ENST00000390488 STK38Q15208 465 aa2.28□□□□□ -2.04
TRAJ49-201ENST00000390488 ME3Q16798 604 aa2.28□□□□□ -2.04
TRAJ49-201ENST00000390488 MTHFSDQ2M296 383 aaKnown RBP2.28□□□□□ -2.04
TRAJ49-201ENST00000390488 TSR1Q2NL82 804 aaKnown RBP2.28□□□□□ -2.04
TRAJ49-201ENST00000390488 NBPF9Q3BBW0 867 aa2.28□□□□□ -2.04
TRAJ49-201ENST00000390488 GLE1Q53GS7 698 aaKnown RBP2.28□□□□□ -2.04
TRAJ49-201ENST00000390488 CCDC93Q567U6 631 aa2.28□□□□□ -2.04
TRAJ49-201ENST00000390488 FIGNQ5HY92 759 aa2.28□□□□□ -2.04
TRAJ49-201ENST00000390488 SPDYCQ5MJ68 293 aa2.28□□□□□ -2.04
TRAJ49-201ENST00000390488 SWT1Q5T5J6 900 aaKnown RBP2.28□□□□□ -2.04
TRAJ49-201ENST00000390488 MYSM1Q5VVJ2 828 aa2.28□□□□□ -2.04
TRAJ49-201ENST00000390488 ARL6IP4Q66PJ3 421 aaKnown RBP2.28□□□□□ -2.04
TRAJ49-201ENST00000390488 GALNT17Q6IS24 598 aa2.28□□□□□ -2.04
TRAJ49-201ENST00000390488 EMBQ6PCB8 327 aa2.28□□□□□ -2.04
TRAJ49-201ENST00000390488 SLC4A10Q6U841 1118 aa2.28□□□□□ -2.04
TRAJ49-201ENST00000390488 CWC27Q6UX04 472 aaKnown RBP2.28□□□□□ -2.04
TRAJ49-201ENST00000390488 B4GALNT4Q76KP1 1039 aa2.28□□□□□ -2.04
TRAJ49-201ENST00000390488 UBE3BQ7Z3V4 1068 aa2.28□□□□□ -2.04
TRAJ49-201ENST00000390488 CTAGE6Q86UF2 777 aa2.28□□□□□ -2.04
TRAJ49-201ENST00000390488 AACSQ86V21 672 aa2.28□□□□□ -2.04
TRAJ49-201ENST00000390488 SGMS1Q86VZ5 419 aa2.28□□□□□ -2.04
TRAJ49-201ENST00000390488 SKAP1Q86WV1 359 aa2.28□□□□□ -2.04
TRAJ49-201ENST00000390488 NME9Q86XW9 330 aa2.28□□□□□ -2.04
TRAJ49-201ENST00000390488 HOMER1Q86YM7 354 aa2.28□□□□□ -2.04
TRAJ49-201ENST00000390488 TMTC1Q8IUR5 882 aa2.28□□□□□ -2.04
Retrieved 100 of 20,778 RNA–protein pairs in 509.6 ms