RNA–Protein interactions for RNA: ENST00000382723.4

MSX1-201, Transcript of msh homeobox 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene MSX1, Length 1,939 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSX1-201ENST00000382723 ZNF804AQ7Z570 1209 aa32.28■■■□□ 2.76
MSX1-201ENST00000382723 CCDC171Q6TFL3 1326 aa32.28■■■□□ 2.76
MSX1-201ENST00000382723 SEMA3EO15041 775 aa32.27■■■□□ 2.76
MSX1-201ENST00000382723 WWC3Q9ULE0 1092 aa32.27■■■□□ 2.76
MSX1-201ENST00000382723 EPB41L2O43491 1005 aaKnown RBP32.26■■■□□ 2.76
MSX1-201ENST00000382723 DPP8Q6V1X1 898 aaPredicted RBP32.26■■■□□ 2.76
MSX1-201ENST00000382723 OSBP2Q969R2 916 aa32.26■■■□□ 2.76
MSX1-201ENST00000382723 ADD2P35612 726 aa32.26■■■□□ 2.75
MSX1-201ENST00000382723 LRP2BPQ9P2M1 347 aa32.26■■■□□ 2.75
MSX1-201ENST00000382723 ABCF2Q9UG63 623 aa32.26■■■□□ 2.75
MSX1-201ENST00000382723 MAST3O60307 1309 aa32.25■■■□□ 2.75
MSX1-201ENST00000382723 A0A0G2JLW4 131 aa32.25■■■□□ 2.75
MSX1-201ENST00000382723 M0R2C6 588 aa32.25■■■□□ 2.75
MSX1-201ENST00000382723 MAP3K12Q12852 859 aa32.25■■■□□ 2.75
MSX1-201ENST00000382723 CHAF1AQ13111 956 aaPredicted RBP32.25■■■□□ 2.75
MSX1-201ENST00000382723 PDE6AP16499 860 aa32.24■■■□□ 2.75
MSX1-201ENST00000382723 APPBP2Q92624 585 aa32.24■■■□□ 2.75
MSX1-201ENST00000382723 ZNF532Q9HCE3 1301 aa32.23■■■□□ 2.75
MSX1-201ENST00000382723 CACNA1SQ13698 1873 aa32.23■■■□□ 2.75
MSX1-201ENST00000382723 DPEP1P16444 411 aa32.23■■■□□ 2.75
MSX1-201ENST00000382723 PALD1Q9ULE6 856 aa32.23■■■□□ 2.75
MSX1-201ENST00000382723 JAG2Q9Y219 1238 aa32.23■■■□□ 2.75
MSX1-201ENST00000382723 RIMBP2O15034 1052 aa32.22■■■□□ 2.75
MSX1-201ENST00000382723 HSPA4P34932 840 aa32.22■■■□□ 2.75
MSX1-201ENST00000382723 MAGEB6Q8N7X4 407 aa32.22■■■□□ 2.75
MSX1-201ENST00000382723 LTBP1Q14766 1721 aa32.22■■■□□ 2.75
MSX1-201ENST00000382723 PUS7LQ9H0K6 701 aaKnown RBP32.22■■■□□ 2.75
MSX1-201ENST00000382723 TDRD7Q8NHU6 1098 aaKnown RBP32.21■■■□□ 2.75
MSX1-201ENST00000382723 MAP4K1Q92918 833 aa32.21■■■□□ 2.75
MSX1-201ENST00000382723 UBE3CQ15386 1083 aa32.2■■■□□ 2.75
MSX1-201ENST00000382723 RAI14Q9P0K7 980 aa32.2■■■□□ 2.75
MSX1-201ENST00000382723 PPP1R1BQ9UD71 204 aaPredicted RBP32.2■■■□□ 2.75
MSX1-201ENST00000382723 RBM8AQ9Y5S9 174 aaKnown RBP32.2■■■□□ 2.75
MSX1-201ENST00000382723 SLX4Q8IY92 1834 aa32.2■■■□□ 2.75
MSX1-201ENST00000382723 CD209Q9NNX6 404 aa32.2■■■□□ 2.74
MSX1-201ENST00000382723 PDS5AQ29RF7 1337 aaKnown RBP32.19■■■□□ 2.74
MSX1-201ENST00000382723 TCRBV5S4A2TA0A5A2 114 aa32.19■■■□□ 2.74
MSX1-201ENST00000382723 TTLL6Q8N841 843 aa32.19■■■□□ 2.74
MSX1-201ENST00000382723 KCNA3P22001 575 aa32.18■■■□□ 2.74
MSX1-201ENST00000382723 C7orf43Q8WVR3 580 aa32.18■■■□□ 2.74
MSX1-201ENST00000382723 DUOX1Q9NRD9 1551 aa32.18■■■□□ 2.74
MSX1-201ENST00000382723 MYO5AQ9Y4I1 1855 aaKnown RBP32.18■■■□□ 2.74
MSX1-201ENST00000382723 VPS53Q5VIR6 699 aa32.18■■■□□ 2.74
MSX1-201ENST00000382723 ILDR2Q71H61 639 aa32.18■■■□□ 2.74
MSX1-201ENST00000382723 ZC3H12CQ9C0D7 883 aaKnown RBP32.18■■■□□ 2.74
MSX1-201ENST00000382723 C21orf2O43822 256 aa32.16■■■□□ 2.74
MSX1-201ENST00000382723 KLHL34Q8N239 644 aa32.16■■■□□ 2.74
MSX1-201ENST00000382723 ANAPC15P60006 121 aa32.16■■■□□ 2.74
MSX1-201ENST00000382723 SGIP1Q9BQI5 828 aa32.16■■■□□ 2.74
MSX1-201ENST00000382723 DOCK2Q92608 1830 aa32.15■■■□□ 2.74
MSX1-201ENST00000382723 GPAA1O43292 621 aa32.15■■■□□ 2.74
MSX1-201ENST00000382723 IL1R1P14778 569 aa32.15■■■□□ 2.74
MSX1-201ENST00000382723 SLC4A3P48751 1232 aa32.15■■■□□ 2.74
MSX1-201ENST00000382723 NECTIN1Q15223 517 aa32.15■■■□□ 2.74
MSX1-201ENST00000382723 MYH7P12883 1935 aa32.15■■■□□ 2.74
MSX1-201ENST00000382723 ZBTB22O15209 634 aa32.14■■■□□ 2.74
MSX1-201ENST00000382723 TGFB2P61812 414 aa32.14■■■□□ 2.74
MSX1-201ENST00000382723 RABEP1Q15276 862 aa32.14■■■□□ 2.74
MSX1-201ENST00000382723 ERICH6Q7L0X2 663 aa32.14■■■□□ 2.74
MSX1-201ENST00000382723 RASEFQ8IZ41 740 aa32.14■■■□□ 2.74
MSX1-201ENST00000382723 EYA3Q99504 573 aa32.14■■■□□ 2.74
MSX1-201ENST00000382723 SNX14Q9Y5W7 946 aa32.14■■■□□ 2.74
MSX1-201ENST00000382723 HSPD1P10809 573 aaKnown RBP32.13■■■□□ 2.73
MSX1-201ENST00000382723 CREB3L3Q68CJ9 461 aa32.13■■■□□ 2.73
MSX1-201ENST00000382723 WDR66Q8TBY9 1149 aa32.13■■■□□ 2.73
MSX1-201ENST00000382723 CYP7A1P22680 504 aa32.12■■■□□ 2.73
MSX1-201ENST00000382723 PTGER2P43116 358 aa32.12■■■□□ 2.73
MSX1-201ENST00000382723 DAXXQ9UER7 740 aaPredicted RBP32.12■■■□□ 2.73
MSX1-201ENST00000382723 KIF13BQ9NQT8 1826 aa32.12■■■□□ 2.73
MSX1-201ENST00000382723 PRDX5P30044 214 aa32.12■■■□□ 2.73
MSX1-201ENST00000382723 BECN1Q14457 450 aa32.12■■■□□ 2.73
MSX1-201ENST00000382723 DOK7Q18PE1 504 aa32.12■■■□□ 2.73
MSX1-201ENST00000382723 AIDAQ96BJ3 306 aa32.12■■■□□ 2.73
MSX1-201ENST00000382723 DSCC1Q9BVC3 393 aa32.12■■■□□ 2.73
MSX1-201ENST00000382723 COA1Q9GZY4 146 aa32.12■■■□□ 2.73
MSX1-201ENST00000382723 U3KPZ7 1027 aaPredicted RBP32.12■■■□□ 2.73
MSX1-201ENST00000382723 DLEC1Q9Y238 1755 aa32.11■■■□□ 2.73
MSX1-201ENST00000382723 MYH13Q9UKX3 1938 aa32.11■■■□□ 2.73
MSX1-201ENST00000382723 CC2D2BQ6DHV5 1058 aa32.11■■■□□ 2.73
MSX1-201ENST00000382723 G3V3G9 751 aa32.1■■■□□ 2.73
MSX1-201ENST00000382723 SLC27A2O14975 620 aa32.1■■■□□ 2.73
MSX1-201ENST00000382723 DCAF8Q5TAQ9 597 aa32.1■■■□□ 2.73
MSX1-201ENST00000382723 TBC1D2Q9BYX2 928 aa32.1■■■□□ 2.73
MSX1-201ENST00000382723 NAA16Q6N069 864 aaPredicted RBP32.1■■■□□ 2.73
MSX1-201ENST00000382723 ZGPATQ8N5A5 531 aaKnown RBP32.1■■■□□ 2.73
MSX1-201ENST00000382723 MECOMQ03112 1051 aa32.09■■■□□ 2.73
MSX1-201ENST00000382723 SPTY2D1Q68D10 685 aaPredicted RBP32.09■■■□□ 2.73
MSX1-201ENST00000382723 ADGRA1Q86SQ6 560 aa32.09■■■□□ 2.73
MSX1-201ENST00000382723 MIGA1Q8NAN2 632 aa32.09■■■□□ 2.73
MSX1-201ENST00000382723 PIM2Q9P1W9 311 aa32.09■■■□□ 2.73
MSX1-201ENST00000382723 SALL1Q9NSC2 1324 aa32.08■■■□□ 2.73
MSX1-201ENST00000382723 MBD4O95243 580 aa32.08■■■□□ 2.73
MSX1-201ENST00000382723 ZKSCAN1P17029 563 aaPredicted RBP32.08■■■□□ 2.73
MSX1-201ENST00000382723 RNF20Q5VTR2 975 aa32.08■■■□□ 2.73
MSX1-201ENST00000382723 ZNF384Q8TF68 577 aa32.08■■■□□ 2.73
MSX1-201ENST00000382723 RTFDC1Q9BY42 306 aaPredicted RBP32.08■■■□□ 2.73
MSX1-201ENST00000382723 NSUN4Q96CB9 384 aaKnown RBP32.08■■■□□ 2.73
MSX1-201ENST00000382723 ARMT1Q9H993 441 aa32.08■■■□□ 2.73
MSX1-201ENST00000382723 KCNB2Q92953 911 aa32.07■■■□□ 2.72
MSX1-201ENST00000382723 IL17RAQ96F46 866 aa32.07■■■□□ 2.72
Retrieved 100 of 20,778 RNA–protein pairs in 128.8 ms