RNA–Protein interactions for RNA: ENST00000380680.4

UBL3-201, Transcript of ubiquitin like 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene UBL3, Length 4,384 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBL3-201ENST00000380680 HSP90AA4PQ58FG1 418 aa20.48■□□□□ 0.87
UBL3-201ENST00000380680 LPIN2Q92539 896 aa20.48■□□□□ 0.87
UBL3-201ENST00000380680 HAUS7Q99871 368 aa20.48■□□□□ 0.87
UBL3-201ENST00000380680 PUS3Q9BZE2 481 aaKnown RBP20.48■□□□□ 0.87
UBL3-201ENST00000380680 EIF5P55010 431 aaKnown RBP20.48■□□□□ 0.87
UBL3-201ENST00000380680 CCDC96Q2M329 555 aa20.48■□□□□ 0.87
UBL3-201ENST00000380680 AOPEPQ8N6M6 819 aa20.48■□□□□ 0.87
UBL3-201ENST00000380680 CPLX3Q8WVH0 158 aa20.48■□□□□ 0.87
UBL3-201ENST00000380680 MAP4K1Q92918 833 aa20.48■□□□□ 0.87
UBL3-201ENST00000380680 CARD10Q9BWT7 1032 aa20.48■□□□□ 0.87
UBL3-201ENST00000380680 NYXQ9GZU5 481 aa20.48■□□□□ 0.87
UBL3-201ENST00000380680 GNPATO15228 680 aa20.47■□□□□ 0.87
UBL3-201ENST00000380680 SASH1O94885 1247 aa20.47■□□□□ 0.87
UBL3-201ENST00000380680 A0A1B0GVL5 298 aa20.47■□□□□ 0.87
UBL3-201ENST00000380680 E7EWF7 191 aa20.47■□□□□ 0.87
UBL3-201ENST00000380680 CYP27B1O15528 508 aa20.47■□□□□ 0.87
UBL3-201ENST00000380680 LLPHQ9BRT6 129 aaKnown RBP20.47■□□□□ 0.87
UBL3-201ENST00000380680 ANGEL1Q9UNK9 670 aaKnown RBP20.47■□□□□ 0.87
UBL3-201ENST00000380680 USP31Q70CQ4 1352 aa20.47■□□□□ 0.87
UBL3-201ENST00000380680 CLTCQ00610 1675 aaKnown RBP20.47■□□□□ 0.87
UBL3-201ENST00000380680 WDR17Q8IZU2 1322 aa20.47■□□□□ 0.87
UBL3-201ENST00000380680 UBA7P41226 1012 aa20.46■□□□□ 0.87
UBL3-201ENST00000380680 KIF18AQ8NI77 898 aa20.46■□□□□ 0.87
UBL3-201ENST00000380680 GAS2L3Q86XJ1 694 aa20.46■□□□□ 0.87
UBL3-201ENST00000380680 DEF6Q9H4E7 631 aa20.46■□□□□ 0.87
UBL3-201ENST00000380680 NEMFO60524 1076 aa20.46■□□□□ 0.87
UBL3-201ENST00000380680 GSDMDP57764 484 aa20.46■□□□□ 0.87
UBL3-201ENST00000380680 BRAPQ7Z569 592 aa20.46■□□□□ 0.87
UBL3-201ENST00000380680 LEO1Q8WVC0 666 aaPredicted RBP20.46■□□□□ 0.87
UBL3-201ENST00000380680 DSCC1Q9BVC3 393 aa20.46■□□□□ 0.87
UBL3-201ENST00000380680 MCM9Q9NXL9 1143 aa20.46■□□□□ 0.87
UBL3-201ENST00000380680 NOLC1Q14978 699 aaKnown RBP eCLIP20.46■□□□□ 0.87
UBL3-201ENST00000380680 TEX35Q5T0J7 233 aa20.46■□□□□ 0.87
UBL3-201ENST00000380680 CCDC24Q8N4L8 307 aa20.46■□□□□ 0.87
UBL3-201ENST00000380680 PI4K2BQ8TCG2 481 aa20.46■□□□□ 0.87
UBL3-201ENST00000380680 CPS1P31327 1500 aa20.45■□□□□ 0.87
UBL3-201ENST00000380680 ZBTB38Q8NAP3 1195 aaPredicted RBP20.45■□□□□ 0.86
UBL3-201ENST00000380680 TMOD2Q9NZR1 351 aa20.45■□□□□ 0.86
UBL3-201ENST00000380680 ARHGAP29Q52LW3 1261 aa20.45■□□□□ 0.86
UBL3-201ENST00000380680 RRAGDQ9NQL2 400 aaPredicted RBP20.45■□□□□ 0.86
UBL3-201ENST00000380680 ZNF532Q9HCE3 1301 aa20.45■□□□□ 0.86
UBL3-201ENST00000380680 MYO3AQ8NEV4 1616 aa20.45■□□□□ 0.86
UBL3-201ENST00000380680 TSPY3P0CV98 308 aa20.45■□□□□ 0.86
UBL3-201ENST00000380680 TSPY8P0CW00 308 aa20.45■□□□□ 0.86
UBL3-201ENST00000380680 FAM98CQ17RN3 349 aaKnown RBP20.45■□□□□ 0.86
UBL3-201ENST00000380680 PCCAP05165 728 aaPredicted RBP20.44■□□□□ 0.86
UBL3-201ENST00000380680 LMOD1P29536 600 aaPredicted RBP20.44■□□□□ 0.86
UBL3-201ENST00000380680 AFMP43652 599 aa20.44■□□□□ 0.86
UBL3-201ENST00000380680 HSPD1P10809 573 aaKnown RBP20.44■□□□□ 0.86
UBL3-201ENST00000380680 HMGB2P26583 209 aaKnown RBP20.44■□□□□ 0.86
UBL3-201ENST00000380680 CTSWP56202 376 aa20.44■□□□□ 0.86
UBL3-201ENST00000380680 PTPN12Q05209 780 aaKnown RBP20.44■□□□□ 0.86
UBL3-201ENST00000380680 SF3B2Q13435 895 aaKnown RBP20.44■□□□□ 0.86
UBL3-201ENST00000380680 MTMR6Q9Y217 621 aa20.44■□□□□ 0.86
UBL3-201ENST00000380680 RGS12O14924 1447 aa20.44■□□□□ 0.86
UBL3-201ENST00000380680 IGKV5-2P06315 115 aa20.44■□□□□ 0.86
UBL3-201ENST00000380680 ZNF76P36508 570 aa20.44■□□□□ 0.86
UBL3-201ENST00000380680 ST5P78524 1137 aa20.44■□□□□ 0.86
UBL3-201ENST00000380680 TRIM75PA6NK02 468 aa20.43■□□□□ 0.86
UBL3-201ENST00000380680 F8W031 263 aaPredicted RBP20.43■□□□□ 0.86
UBL3-201ENST00000380680 KIF2AO00139 706 aaPredicted RBP20.43■□□□□ 0.86
UBL3-201ENST00000380680 HS1BP3Q53T59 392 aa20.43■□□□□ 0.86
UBL3-201ENST00000380680 HSP90B2PQ58FF3 399 aa20.43■□□□□ 0.86
UBL3-201ENST00000380680 KANK3Q6NY19 840 aa20.43■□□□□ 0.86
UBL3-201ENST00000380680 ZNF589Q86UQ0 364 aaPredicted RBP20.43■□□□□ 0.86
UBL3-201ENST00000380680 GTF3C6Q969F1 213 aa20.43■□□□□ 0.86
UBL3-201ENST00000380680 MYL10Q9BUA6 226 aa20.43■□□□□ 0.86
UBL3-201ENST00000380680 PRDM1O75626 825 aa20.43■□□□□ 0.86
UBL3-201ENST00000380680 GSTO1P78417 241 aa20.43■□□□□ 0.86
UBL3-201ENST00000380680 TMEM87BQ96K49 555 aa20.43■□□□□ 0.86
UBL3-201ENST00000380680 TCP11L1Q9NUJ3 509 aa20.42■□□□□ 0.86
UBL3-201ENST00000380680 SPATA5Q8NB90 893 aa20.42■□□□□ 0.86
UBL3-201ENST00000380680 UBASH3AP57075 661 aa20.42■□□□□ 0.86
UBL3-201ENST00000380680 NOM1Q5C9Z4 860 aaKnown RBP20.42■□□□□ 0.86
UBL3-201ENST00000380680 GPT2Q8TD30 523 aa20.42■□□□□ 0.86
UBL3-201ENST00000380680 UBXN4Q92575 508 aa20.42■□□□□ 0.86
UBL3-201ENST00000380680 DLC1Q96QB1 1528 aa20.42■□□□□ 0.86
UBL3-201ENST00000380680 URI1O94763 535 aaPredicted RBP20.41■□□□□ 0.86
UBL3-201ENST00000380680 FAM160A1Q05DH4 1040 aa20.41■□□□□ 0.86
UBL3-201ENST00000380680 CUL4AQ13619 759 aa20.41■□□□□ 0.86
UBL3-201ENST00000380680 ATL3Q6DD88 541 aa20.41■□□□□ 0.86
UBL3-201ENST00000380680 ZBTB1Q9Y2K1 713 aa20.41■□□□□ 0.86
UBL3-201ENST00000380680 ZSCAN12O43309 604 aa20.41■□□□□ 0.86
UBL3-201ENST00000380680 RRP9O43818 475 aaKnown RBP20.41■□□□□ 0.86
UBL3-201ENST00000380680 EPHA10Q5JZY3 1008 aa20.41■□□□□ 0.86
UBL3-201ENST00000380680 ADAMTS13Q76LX8 1427 aa20.41■□□□□ 0.86
UBL3-201ENST00000380680 PDCL2Q8N4E4 241 aa20.41■□□□□ 0.86
UBL3-201ENST00000380680 ZNF622Q969S3 477 aaKnown RBP eCLIP20.41■□□□□ 0.86
UBL3-201ENST00000380680 GREM2Q9H772 168 aa20.41■□□□□ 0.86
UBL3-201ENST00000380680 VWDEQ8N2E2 1590 aa20.41■□□□□ 0.86
UBL3-201ENST00000380680 SKILP12757 684 aa20.41■□□□□ 0.86
UBL3-201ENST00000380680 ADORA1P30542 326 aa20.41■□□□□ 0.86
UBL3-201ENST00000380680 GIGYF2Q6Y7W6 1299 aaKnown RBP20.41■□□□□ 0.86
UBL3-201ENST00000380680 IQSEC2Q5JU85 1478 aa20.41■□□□□ 0.86
UBL3-201ENST00000380680 CCDC12Q8WUD4 166 aaPredicted RBP20.41■□□□□ 0.86
UBL3-201ENST00000380680 ADGRL3Q9HAR2 1447 aa20.4■□□□□ 0.86
UBL3-201ENST00000380680 PHKBQ93100 1093 aa20.4■□□□□ 0.86
UBL3-201ENST00000380680 DENND2AQ9ULE3 1009 aa20.4■□□□□ 0.86
UBL3-201ENST00000380680 RAB34Q9BZG1 259 aa20.4■□□□□ 0.86
UBL3-201ENST00000380680 MAP3K15Q6ZN16 1313 aa20.4■□□□□ 0.86
Retrieved 100 of 20,778 RNA–protein pairs in 56.1 ms