RNA–Protein interactions for RNA: ENST00000378536.4

SKI-201, Transcript of SKI proto-oncogene, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SKI, Length 5,613 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKI-201ENST00000378536 TSG101Q99816 390 aa24.43■■□□□ 1.5
SKI-201ENST00000378536 PPP1R12BO60237 982 aaPredicted RBP24.43■■□□□ 1.5
SKI-201ENST00000378536 BMP15O95972 392 aa24.43■■□□□ 1.5
SKI-201ENST00000378536 USPL1Q5W0Q7 1092 aa24.43■■□□□ 1.5
SKI-201ENST00000378536 PRM3Q9NNZ6 103 aa24.43■■□□□ 1.5
SKI-201ENST00000378536 PDE6BP35913 854 aa24.43■■□□□ 1.5
SKI-201ENST00000378536 UBA7P41226 1012 aa24.43■■□□□ 1.5
SKI-201ENST00000378536 ZAP70P43403 619 aa24.43■■□□□ 1.5
SKI-201ENST00000378536 SUPT20HQ8NEM7 779 aa24.43■■□□□ 1.5
SKI-201ENST00000378536 PIK3C2BO00750 1634 aa24.42■■□□□ 1.5
SKI-201ENST00000378536 SLC27A2O14975 620 aa24.42■■□□□ 1.5
SKI-201ENST00000378536 CERS3Q8IU89 383 aa24.42■■□□□ 1.5
SKI-201ENST00000378536 HEG1Q9ULI3 1381 aa24.42■■□□□ 1.5
SKI-201ENST00000378536 GIGYF2Q6Y7W6 1299 aaKnown RBP24.42■■□□□ 1.5
SKI-201ENST00000378536 EIF5P55010 431 aaKnown RBP24.42■■□□□ 1.5
SKI-201ENST00000378536 AMPD3Q01432 767 aa24.42■■□□□ 1.5
SKI-201ENST00000378536 PPP4R3AQ6IN85 833 aa24.42■■□□□ 1.5
SKI-201ENST00000378536 DLC1Q96QB1 1528 aa24.42■■□□□ 1.5
SKI-201ENST00000378536 NAPAP54920 295 aa24.41■■□□□ 1.5
SKI-201ENST00000378536 MPNDQ8N594 471 aa24.41■■□□□ 1.5
SKI-201ENST00000378536 AXIN2Q9Y2T1 843 aa24.41■■□□□ 1.5
SKI-201ENST00000378536 NCAPD2Q15021 1401 aa24.41■■□□□ 1.5
SKI-201ENST00000378536 TNNI2P48788 182 aa24.41■■□□□ 1.5
SKI-201ENST00000378536 TXLNBQ8N3L3 684 aa24.41■■□□□ 1.5
SKI-201ENST00000378536 NDUFB9Q9Y6M9 179 aa24.41■■□□□ 1.5
SKI-201ENST00000378536 FILIP1Q7Z7B0 1213 aa24.41■■□□□ 1.5
SKI-201ENST00000378536 SAP30BPQ9UHR5 308 aaKnown RBP24.41■■□□□ 1.5
SKI-201ENST00000378536 USP31Q70CQ4 1352 aa24.41■■□□□ 1.5
SKI-201ENST00000378536 RXRBP28702 533 aa24.41■■□□□ 1.5
SKI-201ENST00000378536 KIF20AO95235 890 aa24.4■■□□□ 1.5
SKI-201ENST00000378536 F13A1P00488 732 aa24.4■■□□□ 1.5
SKI-201ENST00000378536 PIGBQ92521 554 aa24.4■■□□□ 1.5
SKI-201ENST00000378536 RPS6KB1P23443 525 aa24.4■■□□□ 1.5
SKI-201ENST00000378536 KANK3Q6NY19 840 aa24.4■■□□□ 1.5
SKI-201ENST00000378536 RRP36Q96EU6 259 aaKnown RBP24.4■■□□□ 1.5
SKI-201ENST00000378536 KRT27Q7Z3Y8 459 aa24.4■■□□□ 1.5
SKI-201ENST00000378536 KCNG4Q8TDN1 519 aa24.4■■□□□ 1.5
SKI-201ENST00000378536 TRIM37O94972 964 aa24.39■■□□□ 1.5
SKI-201ENST00000378536 NF2P35240 595 aa24.39■■□□□ 1.5
SKI-201ENST00000378536 ARGLU1Q9NWB6 273 aaPredicted RBP24.39■■□□□ 1.5
SKI-201ENST00000378536 MED14O60244 1454 aa24.39■■□□□ 1.49
SKI-201ENST00000378536 NOM1Q5C9Z4 860 aaKnown RBP24.39■■□□□ 1.49
SKI-201ENST00000378536 INTS4Q96HW7 963 aaKnown RBP24.39■■□□□ 1.49
SKI-201ENST00000378536 PANK2Q9BZ23 570 aa24.39■■□□□ 1.49
SKI-201ENST00000378536 CLEC11AQ9Y240 323 aa24.39■■□□□ 1.49
SKI-201ENST00000378536 IBTKQ9P2D0 1353 aaPredicted RBP24.39■■□□□ 1.49
SKI-201ENST00000378536 PTPDC1A2A3K4 754 aa24.38■■□□□ 1.49
SKI-201ENST00000378536 CCDC102BQ68D86 513 aa24.38■■□□□ 1.49
SKI-201ENST00000378536 UBA5Q9GZZ9 404 aa24.38■■□□□ 1.49
SKI-201ENST00000378536 LARGE2Q8N3Y3 721 aa24.38■■□□□ 1.49
SKI-201ENST00000378536 ZKSCAN3Q9BRR0 538 aa24.38■■□□□ 1.49
SKI-201ENST00000378536 C6orf50Q9HD87 102 aa24.38■■□□□ 1.49
SKI-201ENST00000378536 RBM28Q9NW13 759 aaKnown RBP24.38■■□□□ 1.49
SKI-201ENST00000378536 MSL1Q68DK7 614 aa24.38■■□□□ 1.49
SKI-201ENST00000378536 AATFQ9NY61 560 aaKnown RBP eCLIP24.38■■□□□ 1.492e-6■■■■□ 20.6
SKI-201ENST00000378536 B4E1Z4 1266 aa24.38■■□□□ 1.49
SKI-201ENST00000378536 FBXO3Q9UK99 471 aa24.38■■□□□ 1.49
SKI-201ENST00000378536 ZNF532Q9HCE3 1301 aa24.37■■□□□ 1.49
SKI-201ENST00000378536 PTPRMP28827 1452 aa24.37■■□□□ 1.49
SKI-201ENST00000378536 CALML3P27482 149 aa24.37■■□□□ 1.49
SKI-201ENST00000378536 CNPY2Q9Y2B0 182 aa24.37■■□□□ 1.49
SKI-201ENST00000378536 LMOD1P29536 600 aaPredicted RBP24.37■■□□□ 1.49
SKI-201ENST00000378536 TMEM87BQ96K49 555 aa24.37■■□□□ 1.49
SKI-201ENST00000378536 FAM182BQ5T319 152 aa24.37■■□□□ 1.49
SKI-201ENST00000378536 SNX14Q9Y5W7 946 aa24.37■■□□□ 1.49
SKI-201ENST00000378536 CYP27B1O15528 508 aa24.37■■□□□ 1.49
SKI-201ENST00000378536 FGFR1OPO95684 399 aaKnown RBP24.37■■□□□ 1.49
SKI-201ENST00000378536 GJA3Q9Y6H8 435 aa24.37■■□□□ 1.49
SKI-201ENST00000378536 CPA1P15085 419 aa24.36■■□□□ 1.49
SKI-201ENST00000378536 EAF2Q96CJ1 260 aaPredicted RBP24.36■■□□□ 1.49
SKI-201ENST00000378536 MPHOSPH6Q99547 160 aaKnown RBP24.36■■□□□ 1.49
SKI-201ENST00000378536 C1orf167Q5SNV9 1468 aa24.36■■□□□ 1.49
SKI-201ENST00000378536 TBC1D22AQ8WUA7 517 aa24.36■■□□□ 1.49
SKI-201ENST00000378536 STX1AQ16623 288 aa24.36■■□□□ 1.49
SKI-201ENST00000378536 NLGN1Q8N2Q7 840 aa24.36■■□□□ 1.49
SKI-201ENST00000378536 KLHL40Q2TBA0 621 aa24.36■■□□□ 1.49
SKI-201ENST00000378536 RXRAP19793 462 aa24.36■■□□□ 1.49
SKI-201ENST00000378536 SCLT1Q96NL6 688 aa24.35■■□□□ 1.49
SKI-201ENST00000378536 LRRC24Q50LG9 513 aa24.35■■□□□ 1.49
SKI-201ENST00000378536 COPRSQ9NQ92 184 aa24.35■■□□□ 1.49
SKI-201ENST00000378536 GREM2Q9H772 168 aa24.35■■□□□ 1.49
SKI-201ENST00000378536 BRPF3Q9ULD4 1205 aa24.35■■□□□ 1.49
SKI-201ENST00000378536 CPSF1Q10570 1443 aaKnown RBP24.35■■□□□ 1.49
SKI-201ENST00000378536 FKBP15Q5T1M5 1219 aa24.35■■□□□ 1.49
SKI-201ENST00000378536 VSIG10Q8N0Z9 540 aa24.35■■□□□ 1.49
SKI-201ENST00000378536 SEPT12Q8IYM1 358 aa24.34■■□□□ 1.49
SKI-201ENST00000378536 LRRC27Q9C0I9 530 aa24.34■■□□□ 1.49
SKI-201ENST00000378536 SAMM50Q9Y512 469 aa24.34■■□□□ 1.49
SKI-201ENST00000378536 SYKP43405 635 aa24.34■■□□□ 1.49
SKI-201ENST00000378536 CHMP4BP1P59074 171 aa24.34■■□□□ 1.49
SKI-201ENST00000378536 ZNF397Q8NF99 534 aaPredicted RBP24.34■■□□□ 1.49
SKI-201ENST00000378536 SMARCC2Q8TAQ2 1214 aa24.34■■□□□ 1.49
SKI-201ENST00000378536 BIN1O00499 593 aa24.34■■□□□ 1.49
SKI-201ENST00000378536 IDEP14735 1019 aa24.33■■□□□ 1.49
SKI-201ENST00000378536 KRT2P35908 639 aa24.33■■□□□ 1.49
SKI-201ENST00000378536 ERMNQ8TAM6 284 aa24.33■■□□□ 1.49
SKI-201ENST00000378536 PARP1P09874 1014 aaKnown RBP24.33■■□□□ 1.49
SKI-201ENST00000378536 USP48Q86UV5 1035 aa24.32■■□□□ 1.48
SKI-201ENST00000378536 DNM1Q05193 864 aaKnown RBP24.32■■□□□ 1.48
SKI-201ENST00000378536 SEPT11Q9NVA2 429 aaKnown RBP24.32■■□□□ 1.48
Retrieved 100 of 20,778 RNA–protein pairs in 59.1 ms