RNA–Protein interactions for RNA: ENST00000378362.3

GFRA3-202, Transcript of GDNF family receptor alpha 3, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene GFRA3, Length 1,837 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GFRA3-202ENST00000378362 BCL11AQ9H165 835 aa27.16■■□□□ 1.94
GFRA3-202ENST00000378362 ASTN2O75129 1339 aaPredicted RBP27.15■■□□□ 1.94
GFRA3-202ENST00000378362 POLR2AP24928 1970 aaKnown RBP27.15■■□□□ 1.94
GFRA3-202ENST00000378362 FRAT2O75474 233 aaPredicted RBP27.14■■□□□ 1.94
GFRA3-202ENST00000378362 USP17L8P0C7I0 530 aa27.14■■□□□ 1.94
GFRA3-202ENST00000378362 DLK2Q6UY11 383 aa27.14■■□□□ 1.94
GFRA3-202ENST00000378362 USP50Q70EL3 339 aaPredicted RBP27.14■■□□□ 1.94
GFRA3-202ENST00000378362 AGBL3Q8NEM8 1001 aa27.14■■□□□ 1.94
GFRA3-202ENST00000378362 EXOC6BQ9Y2D4 811 aa27.14■■□□□ 1.94
GFRA3-202ENST00000378362 NEUROD6Q96NK8 337 aa27.13■■□□□ 1.93
GFRA3-202ENST00000378362 SCAF8Q9UPN6 1271 aaKnown RBP27.13■■□□□ 1.93
GFRA3-202ENST00000378362 FSTL1Q12841 308 aa27.13■■□□□ 1.93
GFRA3-202ENST00000378362 A0A1B0GUL7 405 aa27.12■■□□□ 1.93
GFRA3-202ENST00000378362 APBB1O00213 710 aa27.12■■□□□ 1.93
GFRA3-202ENST00000378362 CNTROBQ8N137 903 aa27.12■■□□□ 1.93
GFRA3-202ENST00000378362 PCDHAC2Q9Y5I4 1007 aa27.12■■□□□ 1.93
GFRA3-202ENST00000378362 ADAMTSL1Q8N6G6 1762 aa27.11■■□□□ 1.93
GFRA3-202ENST00000378362 PHKA1P46020 1223 aa27.11■■□□□ 1.93
GFRA3-202ENST00000378362 GRIK5Q16478 980 aa27.11■■□□□ 1.93
GFRA3-202ENST00000378362 CRBNQ96SW2 442 aa27.11■■□□□ 1.93
GFRA3-202ENST00000378362 KIF4BQ2VIQ3 1234 aa27.11■■□□□ 1.93
GFRA3-202ENST00000378362 HSPA6P17066 643 aa27.1■■□□□ 1.93
GFRA3-202ENST00000378362 MYOZ2Q9NPC6 264 aa27.1■■□□□ 1.93
GFRA3-202ENST00000378362 SUPT16HQ9Y5B9 1047 aaKnown RBP27.1■■□□□ 1.93
GFRA3-202ENST00000378362 TRAF5O00463 557 aa27.09■■□□□ 1.93
GFRA3-202ENST00000378362 ITGBL1O95965 494 aaPredicted RBP27.09■■□□□ 1.93
GFRA3-202ENST00000378362 MFSD14BQ5SR56 506 aa27.09■■□□□ 1.93
GFRA3-202ENST00000378362 XAGE2Q96GT9 111 aa27.09■■□□□ 1.93
GFRA3-202ENST00000378362 ZNF280AP59817 542 aaPredicted RBP27.09■■□□□ 1.93
GFRA3-202ENST00000378362 NBPF9Q3BBW0 867 aa27.08■■□□□ 1.93
GFRA3-202ENST00000378362 GLIS2Q9BZE0 524 aaPredicted RBP27.08■■□□□ 1.93
GFRA3-202ENST00000378362 OGFOD1Q8N543 542 aa27.07■■□□□ 1.92
GFRA3-202ENST00000378362 NOP58Q9Y2X3 529 aaKnown RBP27.07■■□□□ 1.92
GFRA3-202ENST00000378362 FAM205AQ6ZU69 1335 aa27.07■■□□□ 1.92
GFRA3-202ENST00000378362 SCARF1Q14162 830 aa27.06■■□□□ 1.92
GFRA3-202ENST00000378362 CCDC102BQ68D86 513 aa27.06■■□□□ 1.92
GFRA3-202ENST00000378362 RPAP2Q8IXW5 612 aaPredicted RBP27.06■■□□□ 1.92
GFRA3-202ENST00000378362 AKAP2Q9Y2D5 859 aa27.06■■□□□ 1.92
GFRA3-202ENST00000378362 COL1A1P02452 1464 aaPredicted RBP27.05■■□□□ 1.92
GFRA3-202ENST00000378362 MYO3BQ8WXR4 1341 aa27.05■■□□□ 1.92
GFRA3-202ENST00000378362 IL1RAPL2Q9NP60 686 aa27.04■■□□□ 1.92
GFRA3-202ENST00000378362 TNNI3KQ59H18 835 aa27.04■■□□□ 1.92
GFRA3-202ENST00000378362 USP48Q86UV5 1035 aa27.04■■□□□ 1.92
GFRA3-202ENST00000378362 CHMP4BQ9H444 224 aaKnown RBP27.04■■□□□ 1.92
GFRA3-202ENST00000378362 GGA3Q9NZ52 723 aa27.04■■□□□ 1.92
GFRA3-202ENST00000378362 FPGT-TNNI3KV9GXZ4 949 aa27.04■■□□□ 1.92
GFRA3-202ENST00000378362 AOX1Q06278 1338 aa27.03■■□□□ 1.92
GFRA3-202ENST00000378362 ANGEL2Q5VTE6 544 aaKnown RBP27.03■■□□□ 1.92
GFRA3-202ENST00000378362 CCDC8Q9H0W5 538 aaPredicted RBP27.03■■□□□ 1.92
GFRA3-202ENST00000378362 TLR7Q9NYK1 1049 aaKnown RBP27.03■■□□□ 1.92
GFRA3-202ENST00000378362 PCDHB15Q9Y5E8 787 aa27.03■■□□□ 1.92
GFRA3-202ENST00000378362 ZNF609O15014 1411 aa27.03■■□□□ 1.92
GFRA3-202ENST00000378362 MYH13Q9UKX3 1938 aa27.02■■□□□ 1.92
GFRA3-202ENST00000378362 GORABQ5T7V8 394 aa27.02■■□□□ 1.92
GFRA3-202ENST00000378362 PI16Q6UXB8 463 aa27.02■■□□□ 1.92
GFRA3-202ENST00000378362 DBNDD2Q9BQY9 259 aa27.02■■□□□ 1.92
GFRA3-202ENST00000378362 TTF2Q9UNY4 1162 aaKnown RBP27.02■■□□□ 1.92
GFRA3-202ENST00000378362 PASKQ96RG2 1323 aa27.02■■□□□ 1.92
GFRA3-202ENST00000378362 ADM5C9JUS6 153 aa27.02■■□□□ 1.92
GFRA3-202ENST00000378362 WNT10BO00744 389 aa27.02■■□□□ 1.92
GFRA3-202ENST00000378362 IRX6P78412 446 aaPredicted RBP27.02■■□□□ 1.92
GFRA3-202ENST00000378362 PGAP2Q9UHJ9 254 aa27.02■■□□□ 1.92
GFRA3-202ENST00000378362 APLP1P51693 650 aa27.01■■□□□ 1.91
GFRA3-202ENST00000378362 RBM5P52756 815 aaKnown RBP eCLIP27.01■■□□□ 1.91
GFRA3-202ENST00000378362 RASGRF1Q13972 1273 aa27.01■■□□□ 1.91
GFRA3-202ENST00000378362 EAF2Q96CJ1 260 aaPredicted RBP27.01■■□□□ 1.91
GFRA3-202ENST00000378362 HMMRO75330 724 aa27■■□□□ 1.91
GFRA3-202ENST00000378362 HDAC9Q9UKV0 1011 aa27■■□□□ 1.91
GFRA3-202ENST00000378362 KRT26Q7Z3Y9 468 aa27■■□□□ 1.91
GFRA3-202ENST00000378362 ZC3H15Q8WU90 426 aaKnown RBP27■■□□□ 1.91
GFRA3-202ENST00000378362 ZNF408Q9H9D4 720 aa27■■□□□ 1.91
GFRA3-202ENST00000378362 GNL3LQ9NVN8 582 aaKnown RBP27■■□□□ 1.91
GFRA3-202ENST00000378362 ARAP2Q8WZ64 1704 aa26.99■■□□□ 1.91
GFRA3-202ENST00000378362 CFAP100Q494V2 611 aa26.99■■□□□ 1.91
GFRA3-202ENST00000378362 DCPSQ96C86 337 aaKnown RBP26.99■■□□□ 1.91
GFRA3-202ENST00000378362 FKBP1AP62942 108 aaKnown RBP26.98■■□□□ 1.91
GFRA3-202ENST00000378362 PRAMEF18Q5VWM3 479 aa26.98■■□□□ 1.91
GFRA3-202ENST00000378362 PRMT6Q96LA8 375 aaPredicted RBP26.98■■□□□ 1.91
GFRA3-202ENST00000378362 DLGAP5Q15398 846 aa26.97■■□□□ 1.91
GFRA3-202ENST00000378362 RHPN1Q8TCX5 695 aa26.97■■□□□ 1.91
GFRA3-202ENST00000378362 SNRKQ9NRH2 765 aa26.97■■□□□ 1.91
GFRA3-202ENST00000378362 DBNLQ9UJU6 430 aaKnown RBP26.97■■□□□ 1.91
GFRA3-202ENST00000378362 PRDX5P30044 214 aa26.97■■□□□ 1.91
GFRA3-202ENST00000378362 CLRN2A0PK11 232 aa26.96■■□□□ 1.91
GFRA3-202ENST00000378362 CDC37L1Q7L3B6 337 aa26.96■■□□□ 1.91
GFRA3-202ENST00000378362 AACSQ86V21 672 aa26.96■■□□□ 1.91
GFRA3-202ENST00000378362 EXOC6Q8TAG9 804 aa26.96■■□□□ 1.91
GFRA3-202ENST00000378362 SMARCA5O60264 1052 aaPredicted RBP26.95■■□□□ 1.91
GFRA3-202ENST00000378362 CST9Q5W186 159 aa26.95■■□□□ 1.91
GFRA3-202ENST00000378362 TBC1D9Q6ZT07 1266 aa26.95■■□□□ 1.91
GFRA3-202ENST00000378362 TBC1D22AQ8WUA7 517 aa26.95■■□□□ 1.91
GFRA3-202ENST00000378362 DENND2AQ9ULE3 1009 aa26.95■■□□□ 1.91
GFRA3-202ENST00000378362 ZBED3Q96IU2 234 aaPredicted RBP26.95■■□□□ 1.9
GFRA3-202ENST00000378362 GPR108Q9NPR9 543 aa26.95■■□□□ 1.9
GFRA3-202ENST00000378362 HMG20BQ9P0W2 317 aa26.95■■□□□ 1.9
GFRA3-202ENST00000378362 ABCF2Q9UG63 623 aa26.95■■□□□ 1.9
GFRA3-202ENST00000378362 MCAMP43121 646 aa26.94■■□□□ 1.9
GFRA3-202ENST00000378362 WDR66Q8TBY9 1149 aa26.94■■□□□ 1.9
GFRA3-202ENST00000378362 NDUFB9Q9Y6M9 179 aa26.94■■□□□ 1.9
GFRA3-202ENST00000378362 CRKP46108 304 aa26.93■■□□□ 1.9
Retrieved 100 of 20,778 RNA–protein pairs in 22.1 ms