RNA–Protein interactions for RNA: ENST00000378198.8

TDP2-202, Transcript of tyrosyl-DNA phosphodiesterase 2, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene TDP2, Length 2,071 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TDP2-202ENST00000378198 ME1P48163 572 aa21.26■□□□□ 0.99
TDP2-202ENST00000378198 GUCY1B3Q02153 619 aa21.26■□□□□ 0.99
TDP2-202ENST00000378198 IFIT5Q13325 482 aaKnown RBP21.26■□□□□ 0.99
TDP2-202ENST00000378198 ZBTB38Q8NAP3 1195 aaPredicted RBP21.26■□□□□ 0.99
TDP2-202ENST00000378198 NCOA7Q8NI08 942 aa21.26■□□□□ 0.99
TDP2-202ENST00000378198 TMOD3Q9NYL9 352 aa21.26■□□□□ 0.99
TDP2-202ENST00000378198 CLIP2Q9UDT6 1046 aa21.26■□□□□ 0.99
TDP2-202ENST00000378198 WDR19Q8NEZ3 1342 aa21.26■□□□□ 0.99
TDP2-202ENST00000378198 FGAP02671 866 aa21.25■□□□□ 0.99
TDP2-202ENST00000378198 ZSCAN25Q6NSZ9 544 aa21.25■□□□□ 0.99
TDP2-202ENST00000378198 MB21D2Q8IYB1 491 aaPredicted RBP21.25■□□□□ 0.99
TDP2-202ENST00000378198 VSIG10Q8N0Z9 540 aa21.25■□□□□ 0.99
TDP2-202ENST00000378198 FSIP1Q8NA03 581 aa21.25■□□□□ 0.99
TDP2-202ENST00000378198 ANO10Q9NW15 660 aa21.25■□□□□ 0.99
TDP2-202ENST00000378198 PRC1O43663 620 aa21.25■□□□□ 0.99
TDP2-202ENST00000378198 ZAP70P43403 619 aa21.25■□□□□ 0.99
TDP2-202ENST00000378198 ADALQ6DHV7 355 aa21.25■□□□□ 0.99
TDP2-202ENST00000378198 C11orf57Q6ZUT1 292 aaPredicted RBP21.25■□□□□ 0.99
TDP2-202ENST00000378198 NRBP1Q9UHY1 535 aa21.25■□□□□ 0.99
TDP2-202ENST00000378198 C4AP0C0L4 1744 aa21.25■□□□□ 0.99
TDP2-202ENST00000378198 C4BP0C0L5 1744 aa21.25■□□□□ 0.99
TDP2-202ENST00000378198 SOS2Q07890 1332 aaPredicted RBP21.24■□□□□ 0.99
TDP2-202ENST00000378198 FAM89AQ96GI7 184 aa21.24■□□□□ 0.99
TDP2-202ENST00000378198 MRFAP1L1Q96HT8 127 aa21.24■□□□□ 0.99
TDP2-202ENST00000378198 ANKRD36CQ5JPF3 1778 aa21.24■□□□□ 0.99
TDP2-202ENST00000378198 CDHR2Q9BYE9 1310 aa21.24■□□□□ 0.99
TDP2-202ENST00000378198 A0A1W2PQ27 194 aa21.24■□□□□ 0.99
TDP2-202ENST00000378198 A0A1W2PQ64 194 aa21.24■□□□□ 0.99
TDP2-202ENST00000378198 A0A1W2PQD8 194 aa21.24■□□□□ 0.99
TDP2-202ENST00000378198 HAND2P61296 217 aa21.24■□□□□ 0.99
TDP2-202ENST00000378198 SCARF1Q14162 830 aa21.24■□□□□ 0.99
TDP2-202ENST00000378198 MRPS27Q92552 414 aaKnown RBP21.24■□□□□ 0.99
TDP2-202ENST00000378198 C8orf76Q96K31 380 aa21.24■□□□□ 0.99
TDP2-202ENST00000378198 PCDHA7Q9UN72 937 aa21.24■□□□□ 0.99
TDP2-202ENST00000378198 ZNF330Q9Y3S2 320 aaPredicted RBP21.24■□□□□ 0.99
TDP2-202ENST00000378198 KLF18A0A0U1RQI7 1052 aa21.23■□□□□ 0.99
TDP2-202ENST00000378198 ZNF213O14771 459 aa21.23■□□□□ 0.99
TDP2-202ENST00000378198 RALYLQ86SE5 291 aaKnown RBP21.23■□□□□ 0.99
TDP2-202ENST00000378198 RGS22Q8NE09 1264 aa21.23■□□□□ 0.99
TDP2-202ENST00000378198 DDX24Q9GZR7 859 aaKnown RBP eCLIP21.23■□□□□ 0.99
TDP2-202ENST00000378198 PUS7LQ9H0K6 701 aaKnown RBP21.23■□□□□ 0.99
TDP2-202ENST00000378198 ITGB4P16144 1822 aa21.22■□□□□ 0.99
TDP2-202ENST00000378198 BECN2A8MW95 431 aa21.22■□□□□ 0.99
TDP2-202ENST00000378198 ATP2B3Q16720 1220 aa21.22■□□□□ 0.99
TDP2-202ENST00000378198 GPHNQ9NQX3 736 aaPredicted RBP21.22■□□□□ 0.99
TDP2-202ENST00000378198 PPFIA3O75145 1194 aa21.22■□□□□ 0.99
TDP2-202ENST00000378198 YEATS4O95619 227 aa21.22■□□□□ 0.99
TDP2-202ENST00000378198 LRMPQ12912 555 aa21.22■□□□□ 0.99
TDP2-202ENST00000378198 BRAPQ7Z569 592 aa21.22■□□□□ 0.99
TDP2-202ENST00000378198 FMR1NBQ8N0W7 255 aaPredicted RBP21.22■□□□□ 0.99
TDP2-202ENST00000378198 RIC1Q4ADV7 1423 aa21.22■□□□□ 0.99
TDP2-202ENST00000378198 GPAA1O43292 621 aa21.21■□□□□ 0.99
TDP2-202ENST00000378198 EVA1CP58658 441 aa21.21■□□□□ 0.99
TDP2-202ENST00000378198 GIGYF2Q6Y7W6 1299 aaKnown RBP21.21■□□□□ 0.99
TDP2-202ENST00000378198 DNAJC10Q8IXB1 793 aa21.21■□□□□ 0.99
TDP2-202ENST00000378198 LINC00301Q8NCQ3 95 aa21.21■□□□□ 0.99
TDP2-202ENST00000378198 FBXO18Q8NFZ0 1043 aa21.21■□□□□ 0.99
TDP2-202ENST00000378198 KCNG4Q8TDN1 519 aa21.21■□□□□ 0.99
TDP2-202ENST00000378198 CCDC85AQ96PX6 553 aaPredicted RBP21.21■□□□□ 0.99
TDP2-202ENST00000378198 POLR3EQ9NVU0 708 aa21.21■□□□□ 0.99
TDP2-202ENST00000378198 ORC3Q9UBD5 711 aaPredicted RBP21.21■□□□□ 0.99
TDP2-202ENST00000378198 HPS5Q9UPZ3 1129 aa21.21■□□□□ 0.99
TDP2-202ENST00000378198 RIPOR2Q9Y4F9 1068 aa21.21■□□□□ 0.99
TDP2-202ENST00000378198 MAP3K15Q6ZN16 1313 aa21.21■□□□□ 0.99
TDP2-202ENST00000378198 GOLGA8BA8MQT2 603 aa21.2■□□□□ 0.99
TDP2-202ENST00000378198 NEMFO60524 1076 aa21.2■□□□□ 0.99
TDP2-202ENST00000378198 STARD3NLO95772 234 aa21.2■□□□□ 0.99
TDP2-202ENST00000378198 METTL24Q5JXM2 366 aa21.2■□□□□ 0.99
TDP2-202ENST00000378198 CEP57L1Q8IYX8 460 aa21.2■□□□□ 0.99
TDP2-202ENST00000378198 ZNF512BQ96KM6 892 aaPredicted RBP21.2■□□□□ 0.99
TDP2-202ENST00000378198 NAT10Q9H0A0 1025 aaKnown RBP21.2■□□□□ 0.99
TDP2-202ENST00000378198 STRN4Q9NRL3 753 aa21.2■□□□□ 0.99
TDP2-202ENST00000378198 RIOK3O14730 519 aaKnown RBP21.2■□□□□ 0.98
TDP2-202ENST00000378198 CPLX1O14810 134 aa21.2■□□□□ 0.98
TDP2-202ENST00000378198 ANTXR2P58335 489 aa21.2■□□□□ 0.98
TDP2-202ENST00000378198 STK38Q15208 465 aa21.2■□□□□ 0.98
TDP2-202ENST00000378198 CACTINQ8WUQ7 758 aaKnown RBP21.2■□□□□ 0.98
TDP2-202ENST00000378198 MYO5AQ9Y4I1 1855 aaKnown RBP21.2■□□□□ 0.98
TDP2-202ENST00000378198 TTF1Q15361 905 aaPredicted RBP21.19■□□□□ 0.98
TDP2-202ENST00000378198 SF3A1Q15459 793 aaKnown RBP21.19■□□□□ 0.98
TDP2-202ENST00000378198 HSP90AB3PQ58FF7 597 aa21.19■□□□□ 0.98
TDP2-202ENST00000378198 DHX40Q8IX18 779 aaKnown RBP21.19■□□□□ 0.98
TDP2-202ENST00000378198 TNKS1BP1Q9C0C2 1729 aaKnown RBP21.19■□□□□ 0.98
TDP2-202ENST00000378198 CCDC144BQ3MJ40 725 aa21.19■□□□□ 0.98
TDP2-202ENST00000378198 LDHAL6AQ6ZMR3 332 aa21.19■□□□□ 0.98
TDP2-202ENST00000378198 CCDC144CPQ8IYA2 1237 aa21.19■□□□□ 0.98
TDP2-202ENST00000378198 ZNF710Q8N1W2 664 aa21.19■□□□□ 0.98
TDP2-202ENST00000378198 ATRNO75882 1429 aa21.18■□□□□ 0.98
TDP2-202ENST00000378198 ADD2P35612 726 aa21.18■□□□□ 0.98
TDP2-202ENST00000378198 MCAMP43121 646 aa21.18■□□□□ 0.98
TDP2-202ENST00000378198 TRDNQ13061 729 aa21.18■□□□□ 0.98
TDP2-202ENST00000378198 MYSM1Q5VVJ2 828 aa21.18■□□□□ 0.98
TDP2-202ENST00000378198 TTLL11Q8NHH1 800 aa21.18■□□□□ 0.98
TDP2-202ENST00000378198 SDF4Q9BRK5 362 aa21.18■□□□□ 0.98
TDP2-202ENST00000378198 CLIC4Q9Y696 253 aa21.18■□□□□ 0.98
TDP2-202ENST00000378198 ANKRD18BA2A2Z9 1011 aa21.17■□□□□ 0.98
TDP2-202ENST00000378198 ITGA6P23229 1130 aa21.17■□□□□ 0.98
TDP2-202ENST00000378198 OTUD7BQ6GQQ9 843 aa21.17■□□□□ 0.98
TDP2-202ENST00000378198 PI16Q6UXB8 463 aa21.17■□□□□ 0.98
TDP2-202ENST00000378198 LRRC8AQ8IWT6 810 aa21.17■□□□□ 0.98
Retrieved 100 of 20,778 RNA–protein pairs in 19.1 ms