RNA–Protein interactions for RNA: ENST00000378043.8

BEST1-201, Transcript of bestrophin 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene BEST1, Length 2,740 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BEST1-201ENST00000378043 CAVIN2O95810 425 aa12.81□□□□□ -0.36
BEST1-201ENST00000378043 HSPA2P54652 639 aa12.81□□□□□ -0.36
BEST1-201ENST00000378043 GLIPR1L2Q4G1C9 344 aa12.81□□□□□ -0.36
BEST1-201ENST00000378043 GORABQ5T7V8 394 aa12.81□□□□□ -0.36
BEST1-201ENST00000378043 ARHGAP30Q7Z6I6 1101 aaPredicted RBP12.81□□□□□ -0.36
BEST1-201ENST00000378043 ZNF710Q8N1W2 664 aa12.81□□□□□ -0.36
BEST1-201ENST00000378043 STRN4Q9NRL3 753 aa12.81□□□□□ -0.36
BEST1-201ENST00000378043 ZFYP08048 801 aaPredicted RBP12.8□□□□□ -0.36
BEST1-201ENST00000378043 FAM160A1Q05DH4 1040 aa12.8□□□□□ -0.36
BEST1-201ENST00000378043 CCDC144BQ3MJ40 725 aa12.8□□□□□ -0.36
BEST1-201ENST00000378043 ZSCAN25Q6NSZ9 544 aa12.8□□□□□ -0.36
BEST1-201ENST00000378043 CCDC144CPQ8IYA2 1237 aa12.8□□□□□ -0.36
BEST1-201ENST00000378043 ZBTB38Q8NAP3 1195 aaPredicted RBP12.8□□□□□ -0.36
BEST1-201ENST00000378043 NKX2-3Q8TAU0 364 aa12.8□□□□□ -0.36
BEST1-201ENST00000378043 APPBP2Q92624 585 aa12.8□□□□□ -0.36
BEST1-201ENST00000378043 ZNF396Q96N95 335 aaPredicted RBP12.8□□□□□ -0.36
BEST1-201ENST00000378043 CTNNA3Q9UI47 895 aa12.8□□□□□ -0.36
BEST1-201ENST00000378043 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP12.8□□□□□ -0.36
BEST1-201ENST00000378043 CTAGE5O15320 804 aa12.8□□□□□ -0.36
BEST1-201ENST00000378043 IMMTQ16891 758 aaKnown RBP12.8□□□□□ -0.36
BEST1-201ENST00000378043 GJB4Q9NTQ9 266 aa12.8□□□□□ -0.36
BEST1-201ENST00000378043 TMOD3Q9NYL9 352 aa12.8□□□□□ -0.36
BEST1-201ENST00000378043 PCDHA7Q9UN72 937 aa12.8□□□□□ -0.36
BEST1-201ENST00000378043 RIPOR2Q9Y4F9 1068 aa12.8□□□□□ -0.36
BEST1-201ENST00000378043 TNKS1BP1Q9C0C2 1729 aaKnown RBP12.79□□□□□ -0.36
BEST1-201ENST00000378043 FAM177BA6PVY3 158 aa12.79□□□□□ -0.36
BEST1-201ENST00000378043 PRC1O43663 620 aa12.79□□□□□ -0.36
BEST1-201ENST00000378043 MCAMP43121 646 aa12.79□□□□□ -0.36
BEST1-201ENST00000378043 ME1P48163 572 aa12.79□□□□□ -0.36
BEST1-201ENST00000378043 IFIT5Q13325 482 aaKnown RBP12.79□□□□□ -0.36
BEST1-201ENST00000378043 HLFQ16534 295 aa12.79□□□□□ -0.36
BEST1-201ENST00000378043 CACTINQ8WUQ7 758 aaKnown RBP12.79□□□□□ -0.36
BEST1-201ENST00000378043 PIGBQ92521 554 aa12.79□□□□□ -0.36
BEST1-201ENST00000378043 ERCC4Q92889 916 aaPredicted RBP12.79□□□□□ -0.36
BEST1-201ENST00000378043 NBPF3Q9H094 633 aa12.79□□□□□ -0.36
BEST1-201ENST00000378043 DENND2AQ9ULE3 1009 aa12.79□□□□□ -0.36
BEST1-201ENST00000378043 ITGB4P16144 1822 aa12.79□□□□□ -0.36
BEST1-201ENST00000378043 STX1AQ16623 288 aa12.79□□□□□ -0.36
BEST1-201ENST00000378043 SARM1Q6SZW1 724 aa12.79□□□□□ -0.36
BEST1-201ENST00000378043 CCDC73Q6ZRK6 1079 aa12.79□□□□□ -0.36
BEST1-201ENST00000378043 DRC7Q8IY82 874 aa12.79□□□□□ -0.36
BEST1-201ENST00000378043 FMR1NBQ8N0W7 255 aaPredicted RBP12.79□□□□□ -0.36
BEST1-201ENST00000378043 FSIP1Q8NA03 581 aa12.79□□□□□ -0.36
BEST1-201ENST00000378043 RTEL1Q9NZ71 1219 aa12.79□□□□□ -0.36
BEST1-201ENST00000378043 MYH3P11055 1940 aa12.79□□□□□ -0.36
BEST1-201ENST00000378043 KLF18A0A0U1RQI7 1052 aa12.78□□□□□ -0.36
BEST1-201ENST00000378043 GPAA1O43292 621 aa12.78□□□□□ -0.36
BEST1-201ENST00000378043 LRRFIP1Q32MZ4 808 aaKnown RBP12.78□□□□□ -0.36
BEST1-201ENST00000378043 RAB11FIP4Q86YS3 637 aa12.78□□□□□ -0.36
BEST1-201ENST00000378043 DHX40Q8IX18 779 aaKnown RBP12.78□□□□□ -0.36
BEST1-201ENST00000378043 TTLL11Q8NHH1 800 aa12.78□□□□□ -0.36
BEST1-201ENST00000378043 CLIP2Q9UDT6 1046 aa12.78□□□□□ -0.36
BEST1-201ENST00000378043 C4AP0C0L4 1744 aa12.78□□□□□ -0.36
BEST1-201ENST00000378043 C4BP0C0L5 1744 aa12.78□□□□□ -0.36
BEST1-201ENST00000378043 KINO60870 393 aaKnown RBP12.78□□□□□ -0.36
BEST1-201ENST00000378043 ATP2B3Q16720 1220 aa12.78□□□□□ -0.36
BEST1-201ENST00000378043 TAF7LQ5H9L4 462 aa12.78□□□□□ -0.36
BEST1-201ENST00000378043 GIGYF2Q6Y7W6 1299 aaKnown RBP12.78□□□□□ -0.36
BEST1-201ENST00000378043 LINC00301Q8NCQ3 95 aa12.78□□□□□ -0.36
BEST1-201ENST00000378043 FBXO18Q8NFZ0 1043 aa12.78□□□□□ -0.36
BEST1-201ENST00000378043 GREM2Q9H772 168 aa12.78□□□□□ -0.36
BEST1-201ENST00000378043 CLIC4Q9Y696 253 aa12.78□□□□□ -0.36
BEST1-201ENST00000378043 NEDD4P46934 1319 aa12.78□□□□□ -0.36
BEST1-201ENST00000378043 ABCC12Q96J65 1359 aa12.78□□□□□ -0.36
BEST1-201ENST00000378043 KAT6BQ8WYB5 2073 aa12.78□□□□□ -0.36
BEST1-201ENST00000378043 GPTP24298 496 aa12.77□□□□□ -0.36
BEST1-201ENST00000378043 CDC25BP30305 580 aa12.77□□□□□ -0.36
BEST1-201ENST00000378043 ADALQ6DHV7 355 aa12.77□□□□□ -0.36
BEST1-201ENST00000378043 KIF6Q6ZMV9 814 aa12.77□□□□□ -0.36
BEST1-201ENST00000378043 MTERF4Q7Z6M4 381 aaKnown RBP12.77□□□□□ -0.36
BEST1-201ENST00000378043 MAP3K15Q6ZN16 1313 aa12.77□□□□□ -0.36
BEST1-201ENST00000378043 A0A1B0GVL5 298 aa12.77□□□□□ -0.37
BEST1-201ENST00000378043 GOLGA8BA8MQT2 603 aa12.77□□□□□ -0.37
BEST1-201ENST00000378043 RIOK3O14730 519 aaKnown RBP12.77□□□□□ -0.37
BEST1-201ENST00000378043 POLR3DP05423 398 aaPredicted RBP12.77□□□□□ -0.37
BEST1-201ENST00000378043 ITGA6P23229 1130 aa12.77□□□□□ -0.37
BEST1-201ENST00000378043 NLRP10Q86W26 655 aa12.77□□□□□ -0.37
BEST1-201ENST00000378043 VSIG10Q8N0Z9 540 aa12.77□□□□□ -0.37
BEST1-201ENST00000378043 VGLL2Q8N8G2 317 aa12.77□□□□□ -0.37
BEST1-201ENST00000378043 NCOA7Q8NI08 942 aa12.77□□□□□ -0.37
BEST1-201ENST00000378043 C8orf76Q96K31 380 aa12.77□□□□□ -0.37
BEST1-201ENST00000378043 SLAIN2Q9P270 581 aa12.77□□□□□ -0.37
BEST1-201ENST00000378043 CDHR2Q9BYE9 1310 aa12.76□□□□□ -0.37
BEST1-201ENST00000378043 ZNF213O14771 459 aa12.76□□□□□ -0.37
BEST1-201ENST00000378043 NDUFA8P51970 172 aa12.76□□□□□ -0.37
BEST1-201ENST00000378043 METTL24Q5JXM2 366 aa12.76□□□□□ -0.37
BEST1-201ENST00000378043 LDHAL6AQ6ZMR3 332 aa12.76□□□□□ -0.37
BEST1-201ENST00000378043 CHMP4CQ96CF2 233 aa12.76□□□□□ -0.37
BEST1-201ENST00000378043 ORC3Q9UBD5 711 aaPredicted RBP12.76□□□□□ -0.37
BEST1-201ENST00000378043 KIF28PB7ZC32 967 aa12.76□□□□□ -0.37
BEST1-201ENST00000378043 GOLGA6L19H0YKK7 550 aa12.76□□□□□ -0.37
BEST1-201ENST00000378043 ADD2P35612 726 aa12.76□□□□□ -0.37
BEST1-201ENST00000378043 EVA1CP58658 441 aa12.76□□□□□ -0.37
BEST1-201ENST00000378043 ARID5BQ14865 1188 aa12.76□□□□□ -0.37
BEST1-201ENST00000378043 MRPS27Q92552 414 aaKnown RBP12.76□□□□□ -0.37
BEST1-201ENST00000378043 MRFAP1L1Q96HT8 127 aa12.76□□□□□ -0.37
BEST1-201ENST00000378043 SLC4A9Q96Q91 983 aa12.76□□□□□ -0.37
BEST1-201ENST00000378043 NUP98P52948 1817 aa12.75□□□□□ -0.37
BEST1-201ENST00000378043 A0A1W2PQ27 194 aa12.75□□□□□ -0.37
BEST1-201ENST00000378043 A0A1W2PQ64 194 aa12.75□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 120.9 ms