RNA–Protein interactions for RNA: ENST00000377047.8

GPC6-201, Transcript of glypican 6, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene GPC6, Length 6,467 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPC6-201ENST00000377047 CREB3L3Q68CJ9 461 aa15.51■□□□□ 0.07
GPC6-201ENST00000377047 IMPG2Q9BZV3 1241 aa15.51■□□□□ 0.07
GPC6-201ENST00000377047 BACH1O14867 736 aa15.5■□□□□ 0.07
GPC6-201ENST00000377047 PDE8AO60658 829 aa15.5■□□□□ 0.07
GPC6-201ENST00000377047 MRPS27Q92552 414 aaKnown RBP15.5■□□□□ 0.07
GPC6-201ENST00000377047 CCDC87Q9NVE4 849 aa15.5■□□□□ 0.07
GPC6-201ENST00000377047 TMOD4Q9NZQ9 345 aa15.5■□□□□ 0.07
GPC6-201ENST00000377047 NEMFO60524 1076 aa15.5■□□□□ 0.07
GPC6-201ENST00000377047 PUM3Q15397 648 aaKnown RBP15.5■□□□□ 0.07
GPC6-201ENST00000377047 PLCD3Q8N3E9 789 aa15.5■□□□□ 0.07
GPC6-201ENST00000377047 JADE2Q9NQC1 790 aa15.5■□□□□ 0.07
GPC6-201ENST00000377047 PKD2L1Q9P0L9 805 aa15.5■□□□□ 0.07
GPC6-201ENST00000377047 AKR1B10O60218 316 aa15.5■□□□□ 0.07
GPC6-201ENST00000377047 DPP8Q6V1X1 898 aaPredicted RBP15.5■□□□□ 0.07
GPC6-201ENST00000377047 IL27Q8NEV9 243 aa15.5■□□□□ 0.07
GPC6-201ENST00000377047 METTL22Q9BUU2 404 aaPredicted RBP15.5■□□□□ 0.07
GPC6-201ENST00000377047 GPCPD1Q9NPB8 672 aa15.5■□□□□ 0.07
GPC6-201ENST00000377047 GNA11P29992 359 aa15.5■□□□□ 0.07
GPC6-201ENST00000377047 ACTN2P35609 894 aa15.5■□□□□ 0.07
GPC6-201ENST00000377047 EIF6P56537 245 aaKnown RBP15.5■□□□□ 0.07
GPC6-201ENST00000377047 AKNAD1Q5T1N1 836 aa15.5■□□□□ 0.07
GPC6-201ENST00000377047 LARGE2Q8N3Y3 721 aa15.49■□□□□ 0.07
GPC6-201ENST00000377047 C16orf45Q96MC5 204 aaPredicted RBP15.49■□□□□ 0.07
GPC6-201ENST00000377047 A0A1B0GUL7 405 aa15.49■□□□□ 0.07
GPC6-201ENST00000377047 A1BGP04217 495 aa15.49■□□□□ 0.07
GPC6-201ENST00000377047 IFI16Q16666 785 aaKnown RBP15.49■□□□□ 0.07
GPC6-201ENST00000377047 PARD3Q8TEW0 1356 aa15.49■□□□□ 0.07
GPC6-201ENST00000377047 SOS1Q07889 1333 aaPredicted RBP15.49■□□□□ 0.07
GPC6-201ENST00000377047 PSMA7O14818 248 aa15.49■□□□□ 0.07
GPC6-201ENST00000377047 UBASH3AP57075 661 aa15.49■□□□□ 0.07
GPC6-201ENST00000377047 UBE4AQ14139 1066 aa15.49■□□□□ 0.07
GPC6-201ENST00000377047 SLC52A2Q9HAB3 445 aa15.49■□□□□ 0.07
GPC6-201ENST00000377047 PABPN1LA6NDY0 278 aaKnown RBP15.49■□□□□ 0.07
GPC6-201ENST00000377047 SLAIN2Q9P270 581 aa15.49■□□□□ 0.07
GPC6-201ENST00000377047 SPECC1Q5M775 1068 aa15.49■□□□□ 0.07
GPC6-201ENST00000377047 TIMM10P62072 90 aa15.49■□□□□ 0.07
GPC6-201ENST00000377047 G2E3Q7L622 706 aa15.49■□□□□ 0.07
GPC6-201ENST00000377047 RBM28Q9NW13 759 aaKnown RBP15.49■□□□□ 0.07
GPC6-201ENST00000377047 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP15.48■□□□□ 0.07
GPC6-201ENST00000377047 ZNF594Q96JF6 807 aaPredicted RBP15.48■□□□□ 0.07
GPC6-201ENST00000377047 CTAGE1Q96RT6 745 aa15.48■□□□□ 0.07
GPC6-201ENST00000377047 LGR6Q9HBX8 967 aa15.48■□□□□ 0.07
GPC6-201ENST00000377047 EYA2O00167 538 aa15.48■□□□□ 0.07
GPC6-201ENST00000377047 PDCL2Q8N4E4 241 aa15.48■□□□□ 0.07
GPC6-201ENST00000377047 ARMT1Q9H993 441 aa15.48■□□□□ 0.07
GPC6-201ENST00000377047 ARHGEF10O15013 1369 aa15.48■□□□□ 0.07
GPC6-201ENST00000377047 EDC4Q6P2E9 1401 aaKnown RBP15.48■□□□□ 0.07
GPC6-201ENST00000377047 ZYXQ15942 572 aaKnown RBP15.48■□□□□ 0.07
GPC6-201ENST00000377047 PLIN2Q99541 437 aa15.48■□□□□ 0.07
GPC6-201ENST00000377047 DCTPP1Q9H773 170 aa15.48■□□□□ 0.07
GPC6-201ENST00000377047 PRKG1Q13976 671 aa15.47■□□□□ 0.07
GPC6-201ENST00000377047 TAF5LO75529 589 aa15.47■□□□□ 0.07
GPC6-201ENST00000377047 ARHGEF10LQ9HCE6 1279 aa15.47■□□□□ 0.07
GPC6-201ENST00000377047 HELLSQ9NRZ9 838 aa15.47■□□□□ 0.07
GPC6-201ENST00000377047 MAST1Q9Y2H9 1570 aa15.47■□□□□ 0.07
GPC6-201ENST00000377047 SPTLC2O15270 562 aa15.47■□□□□ 0.07
GPC6-201ENST00000377047 USP48Q86UV5 1035 aa15.47■□□□□ 0.07
GPC6-201ENST00000377047 TESK2Q96S53 571 aa15.47■□□□□ 0.07
GPC6-201ENST00000377047 ANO6Q4KMQ2 910 aa15.47■□□□□ 0.07
GPC6-201ENST00000377047 DHX32Q7L7V1 743 aaKnown RBP15.47■□□□□ 0.07
GPC6-201ENST00000377047 SHANK2Q9UPX8 1470 aa15.47■□□□□ 0.07
GPC6-201ENST00000377047 ATP7AQ04656 1500 aa15.46■□□□□ 0.07
GPC6-201ENST00000377047 COL17A1Q9UMD9 1497 aaPredicted RBP15.46■□□□□ 0.07
GPC6-201ENST00000377047 AK2P54819 239 aa15.46■□□□□ 0.07
GPC6-201ENST00000377047 DNM1Q05193 864 aaKnown RBP15.46■□□□□ 0.07
GPC6-201ENST00000377047 XAGE2Q96GT9 111 aa15.46■□□□□ 0.07
GPC6-201ENST00000377047 TCOF1Q13428 1488 aaKnown RBP15.46■□□□□ 0.07
GPC6-201ENST00000377047 RTL1A6NKG5 1358 aa15.46■□□□□ 0.07
GPC6-201ENST00000377047 PTPDC1A2A3K4 754 aa15.46■□□□□ 0.07
GPC6-201ENST00000377047 F13A1P00488 732 aa15.46■□□□□ 0.07
GPC6-201ENST00000377047 SNW1Q13573 536 aaKnown RBP15.46■□□□□ 0.07
GPC6-201ENST00000377047 DTHD1Q6ZMT9 781 aa15.46■□□□□ 0.07
GPC6-201ENST00000377047 MAST3O60307 1309 aa15.46■□□□□ 0.07
GPC6-201ENST00000377047 GJC1P36383 396 aa15.46■□□□□ 0.07
GPC6-201ENST00000377047 ARID5AQ03989 594 aa15.46■□□□□ 0.06
GPC6-201ENST00000377047 TNNI3KQ59H18 835 aa15.46■□□□□ 0.06
GPC6-201ENST00000377047 FPGT-TNNI3KV9GXZ4 949 aa15.46■□□□□ 0.06
GPC6-201ENST00000377047 GOLGA6L9A6NEM1 432 aa15.45■□□□□ 0.06
GPC6-201ENST00000377047 ZSCAN23Q3MJ62 389 aa15.45■□□□□ 0.06
GPC6-201ENST00000377047 CCDC129Q6ZRS4 1044 aa15.45■□□□□ 0.06
GPC6-201ENST00000377047 RUFY3Q7L099 469 aa15.45■□□□□ 0.06
GPC6-201ENST00000377047 KLHDC4Q8TBB5 520 aa15.45■□□□□ 0.06
GPC6-201ENST00000377047 TSNARE1Q96NA8 513 aa15.45■□□□□ 0.06
GPC6-201ENST00000377047 HOMER2Q9NSB8 354 aa15.45■□□□□ 0.06
GPC6-201ENST00000377047 SHTN1A0MZ66 631 aa15.45■□□□□ 0.06
GPC6-201ENST00000377047 CAVIN2O95810 425 aa15.45■□□□□ 0.06
GPC6-201ENST00000377047 IL13P35225 146 aa15.45■□□□□ 0.06
GPC6-201ENST00000377047 DNAJC10Q8IXB1 793 aa15.45■□□□□ 0.06
GPC6-201ENST00000377047 RLBP1P12271 317 aa15.45■□□□□ 0.06
GPC6-201ENST00000377047 GOLGA6L10A0A0M3HER8 536 aa15.45■□□□□ 0.06
GPC6-201ENST00000377047 B4E1Z4 1266 aa15.45■□□□□ 0.06
GPC6-201ENST00000377047 STAMBPO95630 424 aa15.45■□□□□ 0.06
GPC6-201ENST00000377047 KIAA0753Q2KHM9 967 aa15.45■□□□□ 0.06
GPC6-201ENST00000377047 AATFQ9NY61 560 aaKnown RBP eCLIP15.45■□□□□ 0.06
GPC6-201ENST00000377047 FSD2A1L4K1 749 aa15.44■□□□□ 0.06
GPC6-201ENST00000377047 CYLC1P35663 651 aaPredicted RBP15.44■□□□□ 0.06
GPC6-201ENST00000377047 BAG6P46379 1132 aa15.44■□□□□ 0.06
GPC6-201ENST00000377047 HS2ST1Q7LGA3 356 aa15.44■□□□□ 0.06
GPC6-201ENST00000377047 FCHSD1Q86WN1 690 aa15.44■□□□□ 0.06
GPC6-201ENST00000377047 SUPT20HQ8NEM7 779 aa15.44■□□□□ 0.06
Retrieved 100 of 20,778 RNA–protein pairs in 42.1 ms