RNA–Protein interactions for RNA: ENST00000375274.6

PTCH1-203, Transcript of patched 1, humanhuman

TSL 5 BASIC

Gene PTCH1, Length 4,720 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCH1-203ENST00000375274 FBXO3Q9UK99 471 aa13.14□□□□□ -0.31
PTCH1-203ENST00000375274 SAMD9Q5K651 1589 aa13.14□□□□□ -0.31
PTCH1-203ENST00000375274 KIAA0232Q92628 1395 aa13.14□□□□□ -0.31
PTCH1-203ENST00000375274 EVCP57679 992 aa13.14□□□□□ -0.31
PTCH1-203ENST00000375274 PUF60Q9UHX1 559 aaKnown RBP13.14□□□□□ -0.31
PTCH1-203ENST00000375274 ZRSR2Q15696 482 aaKnown RBP13.14□□□□□ -0.31
PTCH1-203ENST00000375274 ZNF569Q5MCW4 686 aa13.14□□□□□ -0.31
PTCH1-203ENST00000375274 ZCRB1Q8TBF4 217 aaKnown RBP13.14□□□□□ -0.31
PTCH1-203ENST00000375274 GTF3C6Q969F1 213 aa13.14□□□□□ -0.31
PTCH1-203ENST00000375274 DRC1Q96MC2 740 aa13.14□□□□□ -0.31
PTCH1-203ENST00000375274 CRNKL1Q9BZJ0 848 aaKnown RBP13.14□□□□□ -0.31
PTCH1-203ENST00000375274 GSTTP1A0A1W2PQM5 241 aa13.13□□□□□ -0.31
PTCH1-203ENST00000375274 GPT2Q8TD30 523 aa13.13□□□□□ -0.31
PTCH1-203ENST00000375274 PHACTR2O75167 634 aa13.13□□□□□ -0.31
PTCH1-203ENST00000375274 BAG3O95817 575 aa13.13□□□□□ -0.31
PTCH1-203ENST00000375274 TUBBP07437 444 aa13.13□□□□□ -0.31
PTCH1-203ENST00000375274 KRT83P78385 493 aa13.13□□□□□ -0.31
PTCH1-203ENST00000375274 KIF5AQ12840 1032 aa13.13□□□□□ -0.31
PTCH1-203ENST00000375274 PRPF4BQ13523 1007 aaKnown RBP13.13□□□□□ -0.31
PTCH1-203ENST00000375274 HSF2BPO75031 334 aa13.13□□□□□ -0.31
PTCH1-203ENST00000375274 TACC1O75410 805 aa13.13□□□□□ -0.31
PTCH1-203ENST00000375274 TNNI3KQ59H18 835 aa13.13□□□□□ -0.31
PTCH1-203ENST00000375274 IP6K1Q92551 441 aa13.13□□□□□ -0.31
PTCH1-203ENST00000375274 SPAG5Q96R06 1193 aa13.13□□□□□ -0.31
PTCH1-203ENST00000375274 FPGT-TNNI3KV9GXZ4 949 aa13.13□□□□□ -0.31
PTCH1-203ENST00000375274 GCP02774 474 aa13.13□□□□□ -0.31
PTCH1-203ENST00000375274 ANO1Q5XXA6 986 aa13.13□□□□□ -0.31
PTCH1-203ENST00000375274 GUCA1BQ9UMX6 200 aa13.13□□□□□ -0.31
PTCH1-203ENST00000375274 ABCC2Q92887 1545 aa13.12□□□□□ -0.31
PTCH1-203ENST00000375274 SLC4A8Q2Y0W8 1093 aa13.12□□□□□ -0.31
PTCH1-203ENST00000375274 CCDC152Q4G0S7 254 aa13.12□□□□□ -0.31
PTCH1-203ENST00000375274 CHAMP1Q96JM3 812 aa13.12□□□□□ -0.31
PTCH1-203ENST00000375274 USP44Q9H0E7 712 aa13.12□□□□□ -0.31
PTCH1-203ENST00000375274 CD2BP2O95400 341 aaKnown RBP13.12□□□□□ -0.31
PTCH1-203ENST00000375274 GBP2P32456 591 aaPredicted RBP13.12□□□□□ -0.31
PTCH1-203ENST00000375274 SPTY2D1Q68D10 685 aaPredicted RBP13.12□□□□□ -0.31
PTCH1-203ENST00000375274 LRRC27Q9C0I9 530 aa13.12□□□□□ -0.31
PTCH1-203ENST00000375274 GNAQP50148 359 aa13.12□□□□□ -0.31
PTCH1-203ENST00000375274 CNGA4Q8IV77 575 aa13.12□□□□□ -0.31
PTCH1-203ENST00000375274 SSH3Q8TE77 659 aa13.12□□□□□ -0.31
PTCH1-203ENST00000375274 TSC1Q92574 1164 aa13.12□□□□□ -0.31
PTCH1-203ENST00000375274 CCDC42Q96M95 316 aa13.12□□□□□ -0.31
PTCH1-203ENST00000375274 JAK2O60674 1132 aa13.11□□□□□ -0.31
PTCH1-203ENST00000375274 RHOXF2BP0C7M4 288 aa13.11□□□□□ -0.31
PTCH1-203ENST00000375274 POTEJP0CG39 1038 aa13.11□□□□□ -0.31
PTCH1-203ENST00000375274 ASIC1P78348 528 aa13.11□□□□□ -0.31
PTCH1-203ENST00000375274 ME3Q16798 604 aa13.11□□□□□ -0.31
PTCH1-203ENST00000375274 RHOXF2Q9BQY4 288 aa13.11□□□□□ -0.31
PTCH1-203ENST00000375274 SBNO1A3KN83 1393 aa13.11□□□□□ -0.31
PTCH1-203ENST00000375274 KDM5CP41229 1560 aa13.11□□□□□ -0.31
PTCH1-203ENST00000375274 GCOM1H8Y6P7 765 aaPredicted RBP13.11□□□□□ -0.31
PTCH1-203ENST00000375274 MYZAPP0CAP1 466 aa13.11□□□□□ -0.31
PTCH1-203ENST00000375274 FANCCQ00597 558 aa13.11□□□□□ -0.31
PTCH1-203ENST00000375274 IQUBQ8NA54 791 aa13.11□□□□□ -0.31
PTCH1-203ENST00000375274 KBTBD3Q8NAB2 608 aa13.11□□□□□ -0.31
PTCH1-203ENST00000375274 SSH2Q76I76 1423 aa13.11□□□□□ -0.31
PTCH1-203ENST00000375274 A0A1B0GUL7 405 aa13.11□□□□□ -0.31
PTCH1-203ENST00000375274 MNAT1P51948 309 aa13.11□□□□□ -0.31
PTCH1-203ENST00000375274 PPP2R3AQ06190 1150 aa13.11□□□□□ -0.31
PTCH1-203ENST00000375274 CETN1Q12798 172 aa13.11□□□□□ -0.31
PTCH1-203ENST00000375274 OTUD7BQ6GQQ9 843 aa13.11□□□□□ -0.31
PTCH1-203ENST00000375274 SLF2Q8IX21 1173 aa13.11□□□□□ -0.31
PTCH1-203ENST00000375274 TAOK3Q9H2K8 898 aa13.11□□□□□ -0.31
PTCH1-203ENST00000375274 BCL2L12Q9HB09 334 aa13.11□□□□□ -0.31
PTCH1-203ENST00000375274 VPS18Q9P253 973 aa13.11□□□□□ -0.31
PTCH1-203ENST00000375274 LUC7L2Q9Y383 392 aaKnown RBP13.11□□□□□ -0.31
PTCH1-203ENST00000375274 AKR1B15C9JRZ8 316 aaPredicted RBP13.11□□□□□ -0.31
PTCH1-203ENST00000375274 SMC1AQ14683 1233 aaKnown RBP13.11□□□□□ -0.31
PTCH1-203ENST00000375274 ELF2Q15723 593 aa13.11□□□□□ -0.31
PTCH1-203ENST00000375274 MMRN2Q9H8L6 949 aa13.11□□□□□ -0.31
PTCH1-203ENST00000375274 EYA2O00167 538 aa13.1□□□□□ -0.31
PTCH1-203ENST00000375274 CALML3P27482 149 aa13.1□□□□□ -0.31
PTCH1-203ENST00000375274 RILPL1Q5EBL4 403 aa13.1□□□□□ -0.31
PTCH1-203ENST00000375274 NAA16Q6N069 864 aaPredicted RBP13.1□□□□□ -0.31
PTCH1-203ENST00000375274 ZBTB9Q96C00 473 aa13.1□□□□□ -0.31
PTCH1-203ENST00000375274 PLEKHF1Q96S99 279 aa13.1□□□□□ -0.31
PTCH1-203ENST00000375274 KAT6BQ8WYB5 2073 aa13.1□□□□□ -0.31
PTCH1-203ENST00000375274 GNAT2P19087 354 aa13.1□□□□□ -0.31
PTCH1-203ENST00000375274 CADPS2Q86UW7 1296 aa13.1□□□□□ -0.31
PTCH1-203ENST00000375274 DCAF5Q96JK2 942 aa13.1□□□□□ -0.31
PTCH1-203ENST00000375274 LGR6Q9HBX8 967 aa13.1□□□□□ -0.31
PTCH1-203ENST00000375274 TMOD2Q9NZR1 351 aa13.1□□□□□ -0.31
PTCH1-203ENST00000375274 IMPACTQ9P2X3 320 aa13.1□□□□□ -0.31
PTCH1-203ENST00000375274 UBXN1Q04323 297 aa13.1□□□□□ -0.31
PTCH1-203ENST00000375274 IFI16Q16666 785 aaKnown RBP13.1□□□□□ -0.31
PTCH1-203ENST00000375274 HELBQ8NG08 1087 aaPredicted RBP13.1□□□□□ -0.31
PTCH1-203ENST00000375274 SUCLG2Q96I99 432 aa13.1□□□□□ -0.31
PTCH1-203ENST00000375274 METTL22Q9BUU2 404 aaPredicted RBP13.1□□□□□ -0.31
PTCH1-203ENST00000375274 KCNH3Q9ULD8 1083 aa13.1□□□□□ -0.31
PTCH1-203ENST00000375274 KDM6BO15054 1643 aa13.1□□□□□ -0.31
PTCH1-203ENST00000375274 MACROD2A1Z1Q3 448 aa13.1□□□□□ -0.31
PTCH1-203ENST00000375274 ZNF202O95125 648 aa13.1□□□□□ -0.31
PTCH1-203ENST00000375274 TNIP1Q15025 636 aa13.1□□□□□ -0.31
PTCH1-203ENST00000375274 ZNF790Q6PG37 636 aa13.1□□□□□ -0.31
PTCH1-203ENST00000375274 CARD6Q9BX69 1037 aa13.1□□□□□ -0.31
PTCH1-203ENST00000375274 MTMR6Q9Y217 621 aa13.1□□□□□ -0.31
PTCH1-203ENST00000375274 EZRP15311 586 aaKnown RBP13.09□□□□□ -0.31
PTCH1-203ENST00000375274 CALM1P0DP23 149 aa13.09□□□□□ -0.31
PTCH1-203ENST00000375274 CALM2P0DP24 149 aa13.09□□□□□ -0.31
PTCH1-203ENST00000375274 CALM3P0DP25 149 aa13.09□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 80.5 ms