RNA–Protein interactions for RNA: ENST00000374673.3

HSPG2-201, Transcript of heparan sulfate proteoglycan 2, humanhuman

TSL 3

Gene HSPG2, Length 538 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HSPG2-201ENST00000374673 MYO3BQ8WXR4 1341 aa18.43■□□□□ 0.54
HSPG2-201ENST00000374673 FRAT2O75474 233 aaPredicted RBP18.42■□□□□ 0.54
HSPG2-201ENST00000374673 IFIT2P09913 472 aaKnown RBP18.42■□□□□ 0.54
HSPG2-201ENST00000374673 RPS12P25398 132 aaKnown RBP18.42■□□□□ 0.54
HSPG2-201ENST00000374673 FKBP1AP62942 108 aaKnown RBP18.42■□□□□ 0.54
HSPG2-201ENST00000374673 RSBN1LQ6PCB5 846 aaPredicted RBP18.42■□□□□ 0.54
HSPG2-201ENST00000374673 ZNF512BQ96KM6 892 aaPredicted RBP18.42■□□□□ 0.54
HSPG2-201ENST00000374673 DENND2AQ9ULE3 1009 aa18.42■□□□□ 0.54
HSPG2-201ENST00000374673 PDS5AQ29RF7 1337 aaKnown RBP18.42■□□□□ 0.54
HSPG2-201ENST00000374673 UQCRFS1P1P0C7P4 283 aa18.41■□□□□ 0.54
HSPG2-201ENST00000374673 TTC39AQ5SRH9 613 aa18.41■□□□□ 0.54
HSPG2-201ENST00000374673 ANKRD45Q5TZF3 282 aa18.41■□□□□ 0.54
HSPG2-201ENST00000374673 AGBL3Q8NEM8 1001 aa18.41■□□□□ 0.54
HSPG2-201ENST00000374673 FBXW7Q969H0 707 aa18.41■□□□□ 0.54
HSPG2-201ENST00000374673 SCNN1DP51172 638 aa18.4■□□□□ 0.54
HSPG2-201ENST00000374673 RASGRF1Q13972 1273 aa18.4■□□□□ 0.54
HSPG2-201ENST00000374673 DPF2Q92785 391 aa18.4■□□□□ 0.54
HSPG2-201ENST00000374673 ZBTB47Q9UFB7 747 aaPredicted RBP18.4■□□□□ 0.54
HSPG2-201ENST00000374673 ZBTB12Q9Y330 459 aaPredicted RBP18.4■□□□□ 0.54
HSPG2-201ENST00000374673 GMPSP49915 693 aaPredicted RBP18.39■□□□□ 0.53
HSPG2-201ENST00000374673 CHAF1AQ13111 956 aaPredicted RBP18.39■□□□□ 0.53
HSPG2-201ENST00000374673 TBC1D22AQ8WUA7 517 aa18.39■□□□□ 0.53
HSPG2-201ENST00000374673 GMLQ99445 158 aa18.39■□□□□ 0.53
HSPG2-201ENST00000374673 JAG2Q9Y219 1238 aa18.39■□□□□ 0.53
HSPG2-201ENST00000374673 POTECB2RU33 542 aa18.38■□□□□ 0.53
HSPG2-201ENST00000374673 MCAMP43121 646 aa18.38■□□□□ 0.53
HSPG2-201ENST00000374673 NUCB1Q02818 461 aa18.38■□□□□ 0.53
HSPG2-201ENST00000374673 MFSD14BQ5SR56 506 aa18.38■□□□□ 0.53
HSPG2-201ENST00000374673 CERS5Q8N5B7 392 aa18.38■□□□□ 0.53
HSPG2-201ENST00000374673 WDR66Q8TBY9 1149 aa18.38■□□□□ 0.53
HSPG2-201ENST00000374673 ZNF526Q8TF50 670 aaPredicted RBP18.38■□□□□ 0.53
HSPG2-201ENST00000374673 PPIL4Q8WUA2 492 aaKnown RBP eCLIP18.38■□□□□ 0.53
HSPG2-201ENST00000374673 MXD3Q9BW11 206 aa18.38■□□□□ 0.53
HSPG2-201ENST00000374673 BCL11AQ9H165 835 aa18.38■□□□□ 0.53
HSPG2-201ENST00000374673 GPRC5DQ9NZD1 345 aa18.38■□□□□ 0.53
HSPG2-201ENST00000374673 HMG20BQ9P0W2 317 aa18.38■□□□□ 0.53
HSPG2-201ENST00000374673 SALL1Q9NSC2 1324 aa18.38■□□□□ 0.53
HSPG2-201ENST00000374673 IQCA1LA6NCM1 817 aa18.37■□□□□ 0.53
HSPG2-201ENST00000374673 LMOD1P29536 600 aaPredicted RBP18.37■□□□□ 0.53
HSPG2-201ENST00000374673 SCARF1Q14162 830 aa18.37■□□□□ 0.53
HSPG2-201ENST00000374673 B4GALNT3Q6L9W6 998 aa18.37■□□□□ 0.53
HSPG2-201ENST00000374673 CHD1LQ86WJ1 897 aa18.37■□□□□ 0.53
HSPG2-201ENST00000374673 SPATA5Q8NB90 893 aa18.37■□□□□ 0.53
HSPG2-201ENST00000374673 GPBP1L1Q9HC44 474 aaPredicted RBP18.37■□□□□ 0.53
HSPG2-201ENST00000374673 MMP14P50281 582 aa18.36■□□□□ 0.53
HSPG2-201ENST00000374673 ZNF784Q8NCA9 323 aaPredicted RBP18.36■□□□□ 0.53
HSPG2-201ENST00000374673 DOCK2Q92608 1830 aa18.36■□□□□ 0.53
HSPG2-201ENST00000374673 SALL3Q9BXA9 1300 aa18.36■□□□□ 0.53
HSPG2-201ENST00000374673 RRAGCQ9HB90 399 aa18.36■□□□□ 0.53
HSPG2-201ENST00000374673 NMRK2Q9NPI5 230 aa18.36■□□□□ 0.53
HSPG2-201ENST00000374673 CNOT7Q9UIV1 285 aaKnown RBP18.36■□□□□ 0.53
HSPG2-201ENST00000374673 HACL1Q9UJ83 578 aa18.36■□□□□ 0.53
HSPG2-201ENST00000374673 VEGFAP15692 232 aaPredicted RBP18.35■□□□□ 0.53
HSPG2-201ENST00000374673 ATP5JP18859 108 aa18.35■□□□□ 0.53
HSPG2-201ENST00000374673 PI16Q6UXB8 463 aa18.35■□□□□ 0.53
HSPG2-201ENST00000374673 MICALL2Q8IY33 904 aa18.35■□□□□ 0.53
HSPG2-201ENST00000374673 C16orf71Q8IYS4 520 aaPredicted RBP18.35■□□□□ 0.53
HSPG2-201ENST00000374673 ZGPATQ8N5A5 531 aaKnown RBP18.35■□□□□ 0.53
HSPG2-201ENST00000374673 LNPKQ9C0E8 428 aa18.35■□□□□ 0.53
HSPG2-201ENST00000374673 ECHDC1Q9NTX5 307 aa18.35■□□□□ 0.53
HSPG2-201ENST00000374673 SUGT1Q9Y2Z0 365 aa18.35■□□□□ 0.53
HSPG2-201ENST00000374673 MYO5AQ9Y4I1 1855 aaKnown RBP18.35■□□□□ 0.53
HSPG2-201ENST00000374673 TTC41PQ6P2S7 1318 aa18.34■□□□□ 0.53
HSPG2-201ENST00000374673 USP17L8P0C7I0 530 aa18.34■□□□□ 0.53
HSPG2-201ENST00000374673 EPS15P42566 896 aa18.34■□□□□ 0.53
HSPG2-201ENST00000374673 ZNF280AP59817 542 aaPredicted RBP18.34■□□□□ 0.53
HSPG2-201ENST00000374673 CENPQQ7L2Z9 268 aaPredicted RBP18.34■□□□□ 0.53
HSPG2-201ENST00000374673 KIAA0825Q8IV33 1275 aa18.34■□□□□ 0.53
HSPG2-201ENST00000374673 GPATCH3Q96I76 525 aa18.34■□□□□ 0.53
HSPG2-201ENST00000374673 CCDC136Q96JN2 1154 aa18.34■□□□□ 0.53
HSPG2-201ENST00000374673 MAST2Q6P0Q8 1798 aa18.34■□□□□ 0.53
HSPG2-201ENST00000374673 ADAMTSL1Q8N6G6 1762 aa18.33■□□□□ 0.53
HSPG2-201ENST00000374673 SHTN1A0MZ66 631 aa18.33■□□□□ 0.52
HSPG2-201ENST00000374673 H7C1D1 291 aa18.33■□□□□ 0.52
HSPG2-201ENST00000374673 MX1P20591 662 aa18.33■□□□□ 0.52
HSPG2-201ENST00000374673 EPHX2P34913 555 aa18.33■□□□□ 0.52
HSPG2-201ENST00000374673 OTUD7AQ8TE49 926 aaPredicted RBP18.33■□□□□ 0.52
HSPG2-201ENST00000374673 TAF1DQ9H5J8 278 aaPredicted RBP18.33■□□□□ 0.52
HSPG2-201ENST00000374673 ADARB2Q9NS39 739 aaKnown RBP18.33■□□□□ 0.52
HSPG2-201ENST00000374673 PPP4R2Q9NY27 417 aa18.33■□□□□ 0.52
HSPG2-201ENST00000374673 HDAC9Q9UKV0 1011 aa18.33■□□□□ 0.52
HSPG2-201ENST00000374673 ECM29Q5VYK3 1845 aa18.33■□□□□ 0.52
HSPG2-201ENST00000374673 MAST3O60307 1309 aa18.32■□□□□ 0.52
HSPG2-201ENST00000374673 ZAP70P43403 619 aa18.32■□□□□ 0.52
HSPG2-201ENST00000374673 GRIK5Q16478 980 aa18.32■□□□□ 0.52
HSPG2-201ENST00000374673 OGFOD1Q8N543 542 aa18.32■□□□□ 0.52
HSPG2-201ENST00000374673 SNRKQ9NRH2 765 aa18.32■□□□□ 0.52
HSPG2-201ENST00000374673 F8W031 263 aaPredicted RBP18.31■□□□□ 0.52
HSPG2-201ENST00000374673 IGSF3O75054 1194 aa18.31■□□□□ 0.52
HSPG2-201ENST00000374673 CYP2E1P05181 493 aaPredicted RBP18.31■□□□□ 0.52
HSPG2-201ENST00000374673 PRDX5P30044 214 aa18.31■□□□□ 0.52
HSPG2-201ENST00000374673 SPTY2D1Q68D10 685 aaPredicted RBP18.31■□□□□ 0.52
HSPG2-201ENST00000374673 ABCF2Q9UG63 623 aa18.31■□□□□ 0.52
HSPG2-201ENST00000374673 STAP2Q9UGK3 403 aa18.31■□□□□ 0.52
HSPG2-201ENST00000374673 TTF2Q9UNY4 1162 aaKnown RBP18.31■□□□□ 0.52
HSPG2-201ENST00000374673 MYH2Q9UKX2 1941 aa18.31■□□□□ 0.52
HSPG2-201ENST00000374673 KIF3CO14782 793 aa18.3■□□□□ 0.52
HSPG2-201ENST00000374673 ERC2O15083 957 aa18.3■□□□□ 0.52
HSPG2-201ENST00000374673 LDHBP07195 334 aaKnown RBP18.3■□□□□ 0.52
HSPG2-201ENST00000374673 HDLBPQ00341 1268 aaKnown RBP18.3■□□□□ 0.52
Retrieved 100 of 20,778 RNA–protein pairs in 37.5 ms