RNA–Protein interactions for RNA: ENST00000374487.6

HMGCL-202, Transcript of 3-hydroxy-3-methylglutaryl-CoA lyase, humanhuman

TSL 2

Gene HMGCL, Length 2,151 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCL-202ENST00000374487 SLC51AQ86UW1 340 aa14.37□□□□□ -0.11
HMGCL-202ENST00000374487 SYAP1Q96A49 352 aaPredicted RBP14.37□□□□□ -0.11
HMGCL-202ENST00000374487 FBXO3Q9UK99 471 aa14.37□□□□□ -0.11
HMGCL-202ENST00000374487 BCS1LQ9Y276 419 aa14.37□□□□□ -0.11
HMGCL-202ENST00000374487 ABCC12Q96J65 1359 aa14.37□□□□□ -0.11
HMGCL-202ENST00000374487 F13A1P00488 732 aa14.36□□□□□ -0.11
HMGCL-202ENST00000374487 TGFB2P61812 414 aa14.36□□□□□ -0.11
HMGCL-202ENST00000374487 TRIM44Q96DX7 344 aaPredicted RBP14.36□□□□□ -0.11
HMGCL-202ENST00000374487 NEK1Q96PY6 1258 aa14.36□□□□□ -0.11
HMGCL-202ENST00000374487 ALDH8A1Q9H2A2 487 aaPredicted RBP14.36□□□□□ -0.11
HMGCL-202ENST00000374487 HELLSQ9NRZ9 838 aa14.36□□□□□ -0.11
HMGCL-202ENST00000374487 KIF13BQ9NQT8 1826 aa14.36□□□□□ -0.11
HMGCL-202ENST00000374487 TICAM2Q86XR7 235 aa14.36□□□□□ -0.11
HMGCL-202ENST00000374487 C2CD5Q86YS7 1000 aa14.36□□□□□ -0.11
HMGCL-202ENST00000374487 PLA2G12BQ9BX93 195 aa14.36□□□□□ -0.11
HMGCL-202ENST00000374487 SH3TC1Q8TE82 1336 aa14.36□□□□□ -0.11
HMGCL-202ENST00000374487 SYCE3A1L190 88 aa14.35□□□□□ -0.11
HMGCL-202ENST00000374487 PDIA4P13667 645 aaKnown RBP14.35□□□□□ -0.11
HMGCL-202ENST00000374487 FKBP4Q02790 459 aaKnown RBP eCLIP14.35□□□□□ -0.11
HMGCL-202ENST00000374487 COL9A3Q14050 684 aaPredicted RBP14.35□□□□□ -0.11
HMGCL-202ENST00000374487 TTC39AQ5SRH9 613 aa14.35□□□□□ -0.11
HMGCL-202ENST00000374487 NLRP10Q86W26 655 aa14.35□□□□□ -0.11
HMGCL-202ENST00000374487 ANKRD31Q8N7Z5 1873 aa14.35□□□□□ -0.11
HMGCL-202ENST00000374487 ZNF219Q9P2Y4 722 aaPredicted RBP14.35□□□□□ -0.11
HMGCL-202ENST00000374487 VPS37CA5D8V6 355 aaPredicted RBP14.34□□□□□ -0.11
HMGCL-202ENST00000374487 DTNBO60941 627 aa14.34□□□□□ -0.11
HMGCL-202ENST00000374487 NTSR2O95665 410 aa14.34□□□□□ -0.11
HMGCL-202ENST00000374487 CSF1RP07333 972 aa14.34□□□□□ -0.11
HMGCL-202ENST00000374487 LRRFIP1Q32MZ4 808 aaKnown RBP14.34□□□□□ -0.11
HMGCL-202ENST00000374487 LARP1BQ659C4 914 aaKnown RBP14.34□□□□□ -0.11
HMGCL-202ENST00000374487 CNPY2Q9Y2B0 182 aa14.34□□□□□ -0.11
HMGCL-202ENST00000374487 GADD45BO75293 160 aaPredicted RBP14.34□□□□□ -0.11
HMGCL-202ENST00000374487 CYP21A2P08686 494 aa14.34□□□□□ -0.11
HMGCL-202ENST00000374487 PDCP20941 246 aa14.34□□□□□ -0.11
HMGCL-202ENST00000374487 GTF2E1P29083 439 aaPredicted RBP14.34□□□□□ -0.11
HMGCL-202ENST00000374487 FGD1P98174 961 aa14.34□□□□□ -0.11
HMGCL-202ENST00000374487 TOB2Q14106 344 aaPredicted RBP14.34□□□□□ -0.11
HMGCL-202ENST00000374487 LRSAM1Q6UWE0 723 aa14.34□□□□□ -0.11
HMGCL-202ENST00000374487 TPTE2Q6XPS3 522 aa14.34□□□□□ -0.11
HMGCL-202ENST00000374487 BRIP1Q9BX63 1249 aa14.34□□□□□ -0.11
HMGCL-202ENST00000374487 RNF113AO15541 343 aaKnown RBP14.33□□□□□ -0.11
HMGCL-202ENST00000374487 ST3GAL1Q11201 340 aa14.33□□□□□ -0.11
HMGCL-202ENST00000374487 STK3Q13188 491 aa14.33□□□□□ -0.11
HMGCL-202ENST00000374487 ZMYM1Q5SVZ6 1142 aa14.33□□□□□ -0.11
HMGCL-202ENST00000374487 PPIL4Q8WUA2 492 aaKnown RBP eCLIP14.33□□□□□ -0.11
HMGCL-202ENST00000374487 ZNF622Q969S3 477 aaKnown RBP eCLIP14.33□□□□□ -0.11
HMGCL-202ENST00000374487 XAGE2Q96GT9 111 aa14.33□□□□□ -0.11
HMGCL-202ENST00000374487 TRMT112Q9UI30 125 aaKnown RBP14.33□□□□□ -0.11
HMGCL-202ENST00000374487 MTMR6Q9Y217 621 aa14.33□□□□□ -0.11
HMGCL-202ENST00000374487 HCLS1P14317 486 aaPredicted RBP14.33□□□□□ -0.12
HMGCL-202ENST00000374487 ST5P78524 1137 aa14.33□□□□□ -0.12
HMGCL-202ENST00000374487 CCDC173Q0VFZ6 552 aa14.33□□□□□ -0.12
HMGCL-202ENST00000374487 CSPP1Q1MSJ5 1256 aa14.33□□□□□ -0.12
HMGCL-202ENST00000374487 SLFNL1Q499Z3 407 aa14.33□□□□□ -0.12
HMGCL-202ENST00000374487 LDHAL6AQ6ZMR3 332 aa14.33□□□□□ -0.12
HMGCL-202ENST00000374487 TMEM87AQ8NBN3 555 aa14.33□□□□□ -0.12
HMGCL-202ENST00000374487 DSCC1Q9BVC3 393 aa14.33□□□□□ -0.12
HMGCL-202ENST00000374487 CDHR2Q9BYE9 1310 aa14.32□□□□□ -0.12
HMGCL-202ENST00000374487 HMGB1P09429 215 aaKnown RBP14.32□□□□□ -0.12
HMGCL-202ENST00000374487 HSP90B1P14625 803 aaKnown RBP14.32□□□□□ -0.12
HMGCL-202ENST00000374487 ITGA6P23229 1130 aa14.32□□□□□ -0.12
HMGCL-202ENST00000374487 METTL24Q5JXM2 366 aa14.32□□□□□ -0.12
HMGCL-202ENST00000374487 OLFM4Q6UX06 510 aa14.32□□□□□ -0.12
HMGCL-202ENST00000374487 RBSNQ9H1K0 784 aa14.32□□□□□ -0.12
HMGCL-202ENST00000374487 PIM2Q9P1W9 311 aa14.32□□□□□ -0.12
HMGCL-202ENST00000374487 TNRC6CQ9HCJ0 1690 aaKnown RBP14.32□□□□□ -0.12
HMGCL-202ENST00000374487 COL11A2P13942 1736 aaPredicted RBP14.32□□□□□ -0.12
HMGCL-202ENST00000374487 ANKRD18BA2A2Z9 1011 aa14.32□□□□□ -0.12
HMGCL-202ENST00000374487 H0YIN7 160 aa14.32□□□□□ -0.12
HMGCL-202ENST00000374487 FIBPO43427 364 aa14.32□□□□□ -0.12
HMGCL-202ENST00000374487 ADORA1P30542 326 aa14.32□□□□□ -0.12
HMGCL-202ENST00000374487 TPRNQ4KMQ1 711 aa14.32□□□□□ -0.12
HMGCL-202ENST00000374487 TTLL11Q8NHH1 800 aa14.32□□□□□ -0.12
HMGCL-202ENST00000374487 IRS4O14654 1257 aaPredicted RBP14.31□□□□□ -0.12
HMGCL-202ENST00000374487 CTSWP56202 376 aa14.31□□□□□ -0.12
HMGCL-202ENST00000374487 UBE2HP62256 183 aa14.31□□□□□ -0.12
HMGCL-202ENST00000374487 Q6ZUG5 572 aa14.31□□□□□ -0.12
HMGCL-202ENST00000374487 UTP14AQ9BVJ6 771 aaKnown RBP14.31□□□□□ -0.12
HMGCL-202ENST00000374487 GREM2Q9H772 168 aa14.31□□□□□ -0.12
HMGCL-202ENST00000374487 CNNM1Q9NRU3 951 aa14.31□□□□□ -0.12
HMGCL-202ENST00000374487 RGL2O15211 777 aa14.3□□□□□ -0.12
HMGCL-202ENST00000374487 SRGNP10124 158 aa14.3□□□□□ -0.12
HMGCL-202ENST00000374487 HSPD1P10809 573 aaKnown RBP14.3□□□□□ -0.12
HMGCL-202ENST00000374487 PDE6BP35913 854 aa14.3□□□□□ -0.12
HMGCL-202ENST00000374487 DNM1Q05193 864 aaKnown RBP14.3□□□□□ -0.12
HMGCL-202ENST00000374487 ATP2B3Q16720 1220 aa14.3□□□□□ -0.12
HMGCL-202ENST00000374487 WASHC4Q2M389 1173 aa14.3□□□□□ -0.12
HMGCL-202ENST00000374487 DCAF8L1A6NGE4 600 aa14.3□□□□□ -0.12
HMGCL-202ENST00000374487 DALRD3Q5D0E6 543 aaKnown RBP14.3□□□□□ -0.12
HMGCL-202ENST00000374487 RRAGDQ9NQL2 400 aaPredicted RBP14.3□□□□□ -0.12
HMGCL-202ENST00000374487 MAST3O60307 1309 aa14.29□□□□□ -0.12
HMGCL-202ENST00000374487 ZFYP08048 801 aaPredicted RBP14.29□□□□□ -0.12
HMGCL-202ENST00000374487 DHX32Q7L7V1 743 aaKnown RBP14.29□□□□□ -0.12
HMGCL-202ENST00000374487 RIPOR2Q9Y4F9 1068 aa14.29□□□□□ -0.12
HMGCL-202ENST00000374487 PDE8AO60658 829 aa14.29□□□□□ -0.12
HMGCL-202ENST00000374487 PARP10Q53GL7 1025 aa14.29□□□□□ -0.12
HMGCL-202ENST00000374487 ARHGAP27Q6ZUM4 889 aa14.29□□□□□ -0.12
HMGCL-202ENST00000374487 BRF1Q92994 677 aa14.29□□□□□ -0.12
HMGCL-202ENST00000374487 NYXQ9GZU5 481 aa14.29□□□□□ -0.12
HMGCL-202ENST00000374487 BRCA1P38398 1863 aaKnown RBP14.28□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 33 ms