RNA–Protein interactions for RNA: ENST00000371122.8

SMARCA1-202, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SMARCA1, Length 4,099 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCA1-202ENST00000371122 TMEM132AQ24JP5 1023 aa10.51□□□□□ -0.73
SMARCA1-202ENST00000371122 ADCK5Q3MIX3 580 aa10.51□□□□□ -0.73
SMARCA1-202ENST00000371122 DHX58Q96C10 678 aa10.51□□□□□ -0.73
SMARCA1-202ENST00000371122 DRC1Q96MC2 740 aa10.51□□□□□ -0.73
SMARCA1-202ENST00000371122 C19orf44Q9H6X5 657 aa10.51□□□□□ -0.73
SMARCA1-202ENST00000371122 NRKQ7Z2Y5 1582 aa10.51□□□□□ -0.73
SMARCA1-202ENST00000371122 ROBO2Q9HCK4 1378 aa10.51□□□□□ -0.73
SMARCA1-202ENST00000371122 A0A0D9SFI3 127 aa10.5□□□□□ -0.73
SMARCA1-202ENST00000371122 SLC27A2O14975 620 aa10.5□□□□□ -0.73
SMARCA1-202ENST00000371122 CATIPQ7Z7H3 387 aa10.5□□□□□ -0.73
SMARCA1-202ENST00000371122 NUP88Q99567 741 aaPredicted RBP10.5□□□□□ -0.73
SMARCA1-202ENST00000371122 FAM182BQ5T319 152 aa10.5□□□□□ -0.73
SMARCA1-202ENST00000371122 ZNF652Q9Y2D9 606 aa10.5□□□□□ -0.73
SMARCA1-202ENST00000371122 BLMP54132 1417 aaPredicted RBP10.5□□□□□ -0.73
SMARCA1-202ENST00000371122 IL2RBP14784 551 aa10.5□□□□□ -0.73
SMARCA1-202ENST00000371122 ANAPC15P60006 121 aa10.5□□□□□ -0.73
SMARCA1-202ENST00000371122 GNG11P61952 73 aa10.5□□□□□ -0.73
SMARCA1-202ENST00000371122 PTPN21Q16825 1174 aa10.5□□□□□ -0.73
SMARCA1-202ENST00000371122 TRMT2AQ8IZ69 625 aaKnown RBP10.5□□□□□ -0.73
SMARCA1-202ENST00000371122 FAM200AQ8TCP9 573 aa10.5□□□□□ -0.73
SMARCA1-202ENST00000371122 MAP7D2Q96T17 732 aa10.5□□□□□ -0.73
SMARCA1-202ENST00000371122 PDCL3Q9H2J4 239 aa10.5□□□□□ -0.73
SMARCA1-202ENST00000371122 LMBRD1Q9NUN5 540 aa10.5□□□□□ -0.73
SMARCA1-202ENST00000371122 DNAI1Q9UI46 699 aa10.5□□□□□ -0.73
SMARCA1-202ENST00000371122 ZKSCAN5Q9Y2L8 839 aa10.5□□□□□ -0.73
SMARCA1-202ENST00000371122 ADGRL3Q9HAR2 1447 aa10.5□□□□□ -0.73
SMARCA1-202ENST00000371122 TNNI3KQ59H18 835 aa10.49□□□□□ -0.73
SMARCA1-202ENST00000371122 CCDC181Q5TID7 509 aa10.49□□□□□ -0.73
SMARCA1-202ENST00000371122 CCDC102BQ68D86 513 aa10.49□□□□□ -0.73
SMARCA1-202ENST00000371122 FPGT-TNNI3KV9GXZ4 949 aa10.49□□□□□ -0.73
SMARCA1-202ENST00000371122 KIF1AQ12756 1690 aa10.49□□□□□ -0.73
SMARCA1-202ENST00000371122 RRP9O43818 475 aaKnown RBP10.49□□□□□ -0.73
SMARCA1-202ENST00000371122 UBASH3AP57075 661 aa10.49□□□□□ -0.73
SMARCA1-202ENST00000371122 STX1AQ16623 288 aa10.49□□□□□ -0.73
SMARCA1-202ENST00000371122 ODF2Q5BJF6 829 aa10.49□□□□□ -0.73
SMARCA1-202ENST00000371122 MMRN2Q9H8L6 949 aa10.49□□□□□ -0.73
SMARCA1-202ENST00000371122 NPHP3Q7Z494 1330 aa10.49□□□□□ -0.73
SMARCA1-202ENST00000371122 RTL1A6NKG5 1358 aa10.49□□□□□ -0.73
SMARCA1-202ENST00000371122 MBD4O95243 580 aa10.49□□□□□ -0.73
SMARCA1-202ENST00000371122 UBA7P41226 1012 aa10.49□□□□□ -0.73
SMARCA1-202ENST00000371122 ME3Q16798 604 aa10.49□□□□□ -0.73
SMARCA1-202ENST00000371122 DHX32Q7L7V1 743 aaKnown RBP10.49□□□□□ -0.73
SMARCA1-202ENST00000371122 PRR36Q9H6K5 1346 aa10.49□□□□□ -0.73
SMARCA1-202ENST00000371122 CCDC196A0A1B0GTZ2 297 aa10.48□□□□□ -0.73
SMARCA1-202ENST00000371122 RIMBP2O15034 1052 aa10.48□□□□□ -0.73
SMARCA1-202ENST00000371122 CBFA2T2O43439 604 aa10.48□□□□□ -0.73
SMARCA1-202ENST00000371122 GCKRQ14397 625 aa10.48□□□□□ -0.73
SMARCA1-202ENST00000371122 WASF1Q92558 559 aa10.48□□□□□ -0.73
SMARCA1-202ENST00000371122 RPGRQ92834 1020 aaKnown RBP10.48□□□□□ -0.73
SMARCA1-202ENST00000371122 ARMT1Q9H993 441 aa10.48□□□□□ -0.73
SMARCA1-202ENST00000371122 HMG20BQ9P0W2 317 aa10.48□□□□□ -0.73
SMARCA1-202ENST00000371122 SPTLC2O15270 562 aa10.48□□□□□ -0.73
SMARCA1-202ENST00000371122 RNF113AO15541 343 aaKnown RBP10.48□□□□□ -0.73
SMARCA1-202ENST00000371122 EIF6P56537 245 aaKnown RBP10.48□□□□□ -0.73
SMARCA1-202ENST00000371122 DDB1Q16531 1140 aa10.48□□□□□ -0.73
SMARCA1-202ENST00000371122 MRPS27Q92552 414 aaKnown RBP10.48□□□□□ -0.73
SMARCA1-202ENST00000371122 EEF2KMTQ96G04 330 aa10.48□□□□□ -0.73
SMARCA1-202ENST00000371122 IFNKQ9P0W0 207 aa10.48□□□□□ -0.73
SMARCA1-202ENST00000371122 CRYBG1Q9Y4K1 1723 aa10.48□□□□□ -0.73
SMARCA1-202ENST00000371122 ZAP70P43403 619 aa10.48□□□□□ -0.73
SMARCA1-202ENST00000371122 KARSQ15046 597 aaKnown RBP10.48□□□□□ -0.73
SMARCA1-202ENST00000371122 RTN1Q16799 776 aa10.48□□□□□ -0.73
SMARCA1-202ENST00000371122 LRRC24Q50LG9 513 aa10.48□□□□□ -0.73
SMARCA1-202ENST00000371122 TDRD12Q587J7 1177 aaKnown RBP10.48□□□□□ -0.73
SMARCA1-202ENST00000371122 TCERG1LQ5VWI1 586 aa10.48□□□□□ -0.73
SMARCA1-202ENST00000371122 PKNOX2Q96KN3 472 aa10.48□□□□□ -0.73
SMARCA1-202ENST00000371122 TRPM3Q9HCF6 1732 aaPredicted RBP10.48□□□□□ -0.73
SMARCA1-202ENST00000371122 TFCP2L1Q9NZI6 479 aa10.48□□□□□ -0.73
SMARCA1-202ENST00000371122 SEC63Q9UGP8 760 aaKnown RBP10.48□□□□□ -0.73
SMARCA1-202ENST00000371122 DACH1Q9UI36 760 aa10.48□□□□□ -0.73
SMARCA1-202ENST00000371122 MON2Q7Z3U7 1717 aa10.48□□□□□ -0.73
SMARCA1-202ENST00000371122 MYO1BO43795 1136 aa10.48□□□□□ -0.73
SMARCA1-202ENST00000371122 ITGA6P23229 1130 aa10.48□□□□□ -0.73
SMARCA1-202ENST00000371122 FKBP15Q5T1M5 1219 aa10.48□□□□□ -0.73
SMARCA1-202ENST00000371122 DCAF5Q96JK2 942 aa10.48□□□□□ -0.73
SMARCA1-202ENST00000371122 RGPD8O14715 1765 aaPredicted RBP10.47□□□□□ -0.73
SMARCA1-202ENST00000371122 MST1RQ04912 1400 aa10.47□□□□□ -0.73
SMARCA1-202ENST00000371122 N4BP3O15049 544 aa10.47□□□□□ -0.73
SMARCA1-202ENST00000371122 GIGYF1O75420 1035 aaPredicted RBP10.47□□□□□ -0.73
SMARCA1-202ENST00000371122 RFC4P35249 363 aa10.47□□□□□ -0.73
SMARCA1-202ENST00000371122 NAA16Q6N069 864 aaPredicted RBP10.47□□□□□ -0.73
SMARCA1-202ENST00000371122 PI16Q6UXB8 463 aa10.47□□□□□ -0.73
SMARCA1-202ENST00000371122 ANKRD18AQ8IVF6 992 aa10.47□□□□□ -0.73
SMARCA1-202ENST00000371122 PUS3Q9BZE2 481 aaKnown RBP10.47□□□□□ -0.73
SMARCA1-202ENST00000371122 MARF1Q9Y4F3 1742 aaKnown RBP10.47□□□□□ -0.73
SMARCA1-202ENST00000371122 SNAP23O00161 211 aa10.47□□□□□ -0.73
SMARCA1-202ENST00000371122 CTDSPL2Q05D32 466 aa10.47□□□□□ -0.73
SMARCA1-202ENST00000371122 SNW1Q13573 536 aaKnown RBP10.47□□□□□ -0.73
SMARCA1-202ENST00000371122 HEATR3Q7Z4Q2 680 aa10.47□□□□□ -0.73
SMARCA1-202ENST00000371122 XAGE2Q96GT9 111 aa10.47□□□□□ -0.73
SMARCA1-202ENST00000371122 CDC5LQ99459 802 aaKnown RBP10.47□□□□□ -0.73
SMARCA1-202ENST00000371122 TSPYL1Q9H0U9 437 aa10.47□□□□□ -0.73
SMARCA1-202ENST00000371122 MCM9Q9NXL9 1143 aa10.47□□□□□ -0.73
SMARCA1-202ENST00000371122 H0YHG0 523 aa10.47□□□□□ -0.73
SMARCA1-202ENST00000371122 ARID5AQ03989 594 aa10.47□□□□□ -0.73
SMARCA1-202ENST00000371122 IFIT1BQ5T764 474 aaKnown RBP10.47□□□□□ -0.73
SMARCA1-202ENST00000371122 METTL22Q9BUU2 404 aaPredicted RBP10.47□□□□□ -0.73
SMARCA1-202ENST00000371122 BMP2KQ9NSY1 1161 aaPredicted RBP10.47□□□□□ -0.73
SMARCA1-202ENST00000371122 EYA2O00167 538 aa10.46□□□□□ -0.73
SMARCA1-202ENST00000371122 MTIF2P46199 727 aaKnown RBP10.46□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 70.9 ms