RNA–Protein interactions for RNA: ENST00000370952.3

LRRC40-201, Transcript of leucine rich repeat containing 40, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LRRC40, Length 2,884 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC40-201ENST00000370952 PPP2R2CQ9Y2T4 447 aa11.18□□□□□ -0.62
LRRC40-201ENST00000370952 AGLP35573 1532 aa11.18□□□□□ -0.62
LRRC40-201ENST00000370952 NWD1Q149M9 1564 aa11.17□□□□□ -0.62
LRRC40-201ENST00000370952 CCP110O43303 1012 aa11.17□□□□□ -0.62
LRRC40-201ENST00000370952 CASQ1P31415 396 aa11.17□□□□□ -0.62
LRRC40-201ENST00000370952 GPHNQ9NQX3 736 aaPredicted RBP11.17□□□□□ -0.62
LRRC40-201ENST00000370952 CARMIL3Q8ND23 1372 aa11.17□□□□□ -0.62
LRRC40-201ENST00000370952 FDPSP14324 419 aaKnown RBP11.17□□□□□ -0.62
LRRC40-201ENST00000370952 PDILTQ8N807 584 aa11.17□□□□□ -0.62
LRRC40-201ENST00000370952 RTEL1Q9NZ71 1219 aa11.17□□□□□ -0.62
LRRC40-201ENST00000370952 ABCC6O95255 1503 aa11.16□□□□□ -0.62
LRRC40-201ENST00000370952 SPTLC2O15270 562 aa11.16□□□□□ -0.62
LRRC40-201ENST00000370952 ATP8B1O43520 1251 aa11.16□□□□□ -0.62
LRRC40-201ENST00000370952 TPM1P09493 284 aa11.16□□□□□ -0.62
LRRC40-201ENST00000370952 TOP1P11387 765 aaKnown RBP11.16□□□□□ -0.62
LRRC40-201ENST00000370952 MARCKSP29966 332 aaPredicted RBP11.16□□□□□ -0.62
LRRC40-201ENST00000370952 PSME1Q06323 249 aa11.16□□□□□ -0.62
LRRC40-201ENST00000370952 EPHA10Q5JZY3 1008 aa11.16□□□□□ -0.62
LRRC40-201ENST00000370952 GPR161Q8N6U8 529 aaKnown RBP11.16□□□□□ -0.62
LRRC40-201ENST00000370952 RGPD8O14715 1765 aaPredicted RBP11.16□□□□□ -0.62
LRRC40-201ENST00000370952 A0A1W2PQ27 194 aa11.16□□□□□ -0.62
LRRC40-201ENST00000370952 A0A1W2PQ64 194 aa11.16□□□□□ -0.62
LRRC40-201ENST00000370952 A0A1W2PQD8 194 aa11.16□□□□□ -0.62
LRRC40-201ENST00000370952 PFKFB1P16118 471 aa11.16□□□□□ -0.62
LRRC40-201ENST00000370952 PDIA3P30101 505 aaKnown RBP11.16□□□□□ -0.62
LRRC40-201ENST00000370952 KARSQ15046 597 aaKnown RBP11.16□□□□□ -0.62
LRRC40-201ENST00000370952 LONRF2Q1L5Z9 754 aa11.16□□□□□ -0.62
LRRC40-201ENST00000370952 MCMDC2Q4G0Z9 681 aa11.16□□□□□ -0.62
LRRC40-201ENST00000370952 ATL3Q6DD88 541 aa11.16□□□□□ -0.62
LRRC40-201ENST00000370952 FBXO18Q8NFZ0 1043 aa11.16□□□□□ -0.62
LRRC40-201ENST00000370952 DHX58Q96C10 678 aa11.16□□□□□ -0.62
LRRC40-201ENST00000370952 AK7Q96M32 723 aa11.16□□□□□ -0.62
LRRC40-201ENST00000370952 DESI2Q9BSY9 194 aa11.16□□□□□ -0.62
LRRC40-201ENST00000370952 RRP15Q9Y3B9 282 aaKnown RBP11.16□□□□□ -0.62
LRRC40-201ENST00000370952 SALL1Q9NSC2 1324 aa11.16□□□□□ -0.62
LRRC40-201ENST00000370952 ZSCAN12O43309 604 aa11.15□□□□□ -0.62
LRRC40-201ENST00000370952 MAP3K9P80192 1104 aa11.15□□□□□ -0.62
LRRC40-201ENST00000370952 MCM6Q14566 821 aa11.15□□□□□ -0.62
LRRC40-201ENST00000370952 TOGARAM2Q6ZUX3 1019 aa11.15□□□□□ -0.62
LRRC40-201ENST00000370952 SRLQ86TD4 932 aa11.15□□□□□ -0.62
LRRC40-201ENST00000370952 C14orf37Q86TY3 774 aa11.15□□□□□ -0.62
LRRC40-201ENST00000370952 DBNDD2Q9BQY9 259 aa11.15□□□□□ -0.62
LRRC40-201ENST00000370952 IRX2Q9BZI1 471 aaPredicted RBP11.15□□□□□ -0.62
LRRC40-201ENST00000370952 CEMIPQ8WUJ3 1361 aa11.15□□□□□ -0.62
LRRC40-201ENST00000370952 MROH7-TTC4A0A0A0MT08 1334 aa11.15□□□□□ -0.62
LRRC40-201ENST00000370952 TFCP2Q12800 502 aa11.15□□□□□ -0.62
LRRC40-201ENST00000370952 FOXR1Q6PIV2 292 aa11.15□□□□□ -0.62
LRRC40-201ENST00000370952 RSRC2Q7L4I2 434 aaKnown RBP11.15□□□□□ -0.62
LRRC40-201ENST00000370952 TMEM139Q8IV31 216 aa11.15□□□□□ -0.62
LRRC40-201ENST00000370952 CWC15Q9P013 229 aaKnown RBP11.15□□□□□ -0.62
LRRC40-201ENST00000370952 VPS18Q9P253 973 aa11.15□□□□□ -0.62
LRRC40-201ENST00000370952 MRFAP1Q9Y605 127 aa11.15□□□□□ -0.62
LRRC40-201ENST00000370952 HOXB7P09629 217 aa11.14□□□□□ -0.63
LRRC40-201ENST00000370952 IRX3P78415 501 aaPredicted RBP11.14□□□□□ -0.63
LRRC40-201ENST00000370952 VSTM4Q8IW00 320 aa11.14□□□□□ -0.63
LRRC40-201ENST00000370952 LINS1Q8NG48 757 aa11.14□□□□□ -0.63
LRRC40-201ENST00000370952 GOLGA5Q8TBA6 731 aa11.14□□□□□ -0.63
LRRC40-201ENST00000370952 MPHOSPH8Q99549 860 aa11.14□□□□□ -0.63
LRRC40-201ENST00000370952 PDE11AQ9HCR9 933 aa11.14□□□□□ -0.63
LRRC40-201ENST00000370952 ATG3Q9NT62 314 aa11.14□□□□□ -0.63
LRRC40-201ENST00000370952 FANCLQ9NW38 375 aa11.14□□□□□ -0.63
LRRC40-201ENST00000370952 DHX16O60231 1041 aaKnown RBP11.14□□□□□ -0.63
LRRC40-201ENST00000370952 ATP5JP18859 108 aa11.14□□□□□ -0.63
LRRC40-201ENST00000370952 ADKP55263 362 aaKnown RBP11.14□□□□□ -0.63
LRRC40-201ENST00000370952 PNOCQ13519 176 aa11.14□□□□□ -0.63
LRRC40-201ENST00000370952 KCNG4Q8TDN1 519 aa11.14□□□□□ -0.63
LRRC40-201ENST00000370952 EXOC4Q96A65 974 aa11.14□□□□□ -0.63
LRRC40-201ENST00000370952 SLC26A8Q96RN1 970 aa11.14□□□□□ -0.63
LRRC40-201ENST00000370952 PIK3C2AO00443 1686 aa11.14□□□□□ -0.63
LRRC40-201ENST00000370952 KDM3BQ7LBC6 1761 aa11.14□□□□□ -0.63
LRRC40-201ENST00000370952 KIF28PB7ZC32 967 aa11.14□□□□□ -0.63
LRRC40-201ENST00000370952 ANKRD65E5RJM6 399 aa11.14□□□□□ -0.63
LRRC40-201ENST00000370952 E7EWF7 191 aa11.14□□□□□ -0.63
LRRC40-201ENST00000370952 IKBKBO14920 756 aa11.14□□□□□ -0.63
LRRC40-201ENST00000370952 N4BP1O75113 896 aaKnown RBP11.14□□□□□ -0.63
LRRC40-201ENST00000370952 WDHD1O75717 1129 aaPredicted RBP11.14□□□□□ -0.63
LRRC40-201ENST00000370952 NOP2P46087 812 aaKnown RBP11.14□□□□□ -0.63
LRRC40-201ENST00000370952 EXOSC10Q01780 885 aaKnown RBP11.14□□□□□ -0.63
LRRC40-201ENST00000370952 MYL5Q02045 173 aa11.14□□□□□ -0.63
LRRC40-201ENST00000370952 MYSM1Q5VVJ2 828 aa11.14□□□□□ -0.63
LRRC40-201ENST00000370952 CCDC12Q8WUD4 166 aaPredicted RBP11.14□□□□□ -0.63
LRRC40-201ENST00000370952 C8orf76Q96K31 380 aa11.14□□□□□ -0.63
LRRC40-201ENST00000370952 SUGCTQ9HAC7 445 aa11.14□□□□□ -0.63
LRRC40-201ENST00000370952 INTS13Q9NVM9 706 aa11.14□□□□□ -0.63
LRRC40-201ENST00000370952 PUF60Q9UHX1 559 aaKnown RBP11.14□□□□□ -0.63
LRRC40-201ENST00000370952 ARHGAP6O43182 974 aa11.13□□□□□ -0.63
LRRC40-201ENST00000370952 IGKV5-2P06315 115 aa11.13□□□□□ -0.63
LRRC40-201ENST00000370952 ACTN2P35609 894 aa11.13□□□□□ -0.63
LRRC40-201ENST00000370952 TNNI3KQ59H18 835 aa11.13□□□□□ -0.63
LRRC40-201ENST00000370952 AXDND1Q5T1B0 1012 aaPredicted RBP11.13□□□□□ -0.63
LRRC40-201ENST00000370952 WWC2Q6AWC2 1192 aa11.13□□□□□ -0.63
LRRC40-201ENST00000370952 TTLL5Q6EMB2 1281 aa11.13□□□□□ -0.63
LRRC40-201ENST00000370952 GOLGA1Q92805 767 aa11.13□□□□□ -0.63
LRRC40-201ENST00000370952 BAG1Q99933 345 aaPredicted RBP11.13□□□□□ -0.63
LRRC40-201ENST00000370952 HDAC5Q9UQL6 1122 aa11.13□□□□□ -0.63
LRRC40-201ENST00000370952 FPGT-TNNI3KV9GXZ4 949 aa11.13□□□□□ -0.63
LRRC40-201ENST00000370952 NCAPD2Q15021 1401 aa11.13□□□□□ -0.63
LRRC40-201ENST00000370952 CBFA2T2O43439 604 aa11.13□□□□□ -0.63
LRRC40-201ENST00000370952 HMGB1P09429 215 aaKnown RBP11.13□□□□□ -0.63
LRRC40-201ENST00000370952 DHX8Q14562 1220 aaKnown RBP11.13□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 26.7 ms