RNA–Protein interactions for RNA: ENST00000370818.7

GPC3-201, Transcript of glypican 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene GPC3, Length 2,568 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPC3-201ENST00000370818 LRRC2Q9BYS8 371 aa15.14■□□□□ 0.01
GPC3-201ENST00000370818 PIH1D3Q9NQM4 214 aaKnown RBP15.14■□□□□ 0.01
GPC3-201ENST00000370818 RBM27Q9P2N5 1060 aaKnown RBP15.14■□□□□ 0.01
GPC3-201ENST00000370818 CNTNAP4Q9C0A0 1308 aa15.14■□□□□ 0.01
GPC3-201ENST00000370818 HMGB1P09429 215 aaKnown RBP15.14■□□□□ 0.01
GPC3-201ENST00000370818 STK3Q13188 491 aa15.14■□□□□ 0.01
GPC3-201ENST00000370818 SMIM5Q71RC9 77 aa15.14■□□□□ 0.01
GPC3-201ENST00000370818 DHX32Q7L7V1 743 aaKnown RBP15.14■□□□□ 0.01
GPC3-201ENST00000370818 MPHOSPH8Q99549 860 aa15.14■□□□□ 0.01
GPC3-201ENST00000370818 TMEM63CQ9P1W3 806 aa15.14■□□□□ 0.01
GPC3-201ENST00000370818 SPATA31A6Q5VVP1 1343 aa15.13■□□□□ 0.01
GPC3-201ENST00000370818 ADD2P35612 726 aa15.13■□□□□ 0.01
GPC3-201ENST00000370818 EXOSC10Q01780 885 aaKnown RBP15.13■□□□□ 0.01
GPC3-201ENST00000370818 USP48Q86UV5 1035 aa15.13■□□□□ 0.01
GPC3-201ENST00000370818 MYRIPQ8NFW9 859 aa15.13■□□□□ 0.01
GPC3-201ENST00000370818 BCORQ6W2J9 1755 aa15.13■□□□□ 0.01
GPC3-201ENST00000370818 TMEM87AQ8NBN3 555 aa15.13■□□□□ 0.01
GPC3-201ENST00000370818 BRF1Q92994 677 aa15.13■□□□□ 0.01
GPC3-201ENST00000370818 GTF3C6Q969F1 213 aa15.13■□□□□ 0.01
GPC3-201ENST00000370818 AGXT2Q9BYV1 514 aa15.13■□□□□ 0.01
GPC3-201ENST00000370818 GADD45BO75293 160 aaPredicted RBP15.12■□□□□ 0.01
GPC3-201ENST00000370818 MBD3O95983 291 aa15.12■□□□□ 0.01
GPC3-201ENST00000370818 FGAP02671 866 aa15.12■□□□□ 0.01
GPC3-201ENST00000370818 HSP90B1P14625 803 aaKnown RBP15.12■□□□□ 0.01
GPC3-201ENST00000370818 CBX1P83916 185 aa15.12■□□□□ 0.01
GPC3-201ENST00000370818 FAM182BQ5T319 152 aa15.12■□□□□ 0.01
GPC3-201ENST00000370818 ZNF710Q8N1W2 664 aa15.12■□□□□ 0.01
GPC3-201ENST00000370818 DDX24Q9GZR7 859 aaKnown RBP eCLIP15.12■□□□□ 0.01
GPC3-201ENST00000370818 CCDC39Q9UFE4 941 aa15.12■□□□□ 0.01
GPC3-201ENST00000370818 CNPY2Q9Y2B0 182 aa15.12■□□□□ 0.01
GPC3-201ENST00000370818 COL4A1P02462 1669 aa15.12■□□□□ 0.01
GPC3-201ENST00000370818 GPAA1O43292 621 aa15.12■□□□□ 0.01
GPC3-201ENST00000370818 UQCRFS1P1P0C7P4 283 aa15.12■□□□□ 0.01
GPC3-201ENST00000370818 TTF1Q15361 905 aaPredicted RBP15.12■□□□□ 0.01
GPC3-201ENST00000370818 SLC9C2Q5TAH2 1124 aa15.12■□□□□ 0.01
GPC3-201ENST00000370818 LARP1BQ659C4 914 aaKnown RBP15.12■□□□□ 0.01
GPC3-201ENST00000370818 C3orf67Q6ZVT6 689 aa15.12■□□□□ 0.01
GPC3-201ENST00000370818 BCL2L12Q9HB09 334 aa15.12■□□□□ 0.01
GPC3-201ENST00000370818 THSD7AQ9UPZ6 1657 aa15.11■□□□□ 0.01
GPC3-201ENST00000370818 SLC5A1P13866 664 aa15.11■□□□□ 0.01
GPC3-201ENST00000370818 ERFEQ4G0M1 354 aa15.11■□□□□ 0.01
GPC3-201ENST00000370818 ATRNO75882 1429 aa15.11■□□□□ 0.01
GPC3-201ENST00000370818 IDH1O75874 414 aaKnown RBP15.11■□□□□ 0.01
GPC3-201ENST00000370818 LETM1O95202 739 aaPredicted RBP15.11■□□□□ 0.01
GPC3-201ENST00000370818 IGHMBP2P38935 993 aaKnown RBP15.11■□□□□ 0.01
GPC3-201ENST00000370818 LAMB2P55268 1798 aa15.11■□□□□ 0.01
GPC3-201ENST00000370818 ARAP2Q8WZ64 1704 aa15.1■□□□□ 0.01
GPC3-201ENST00000370818 VPS37CA5D8V6 355 aaPredicted RBP15.1■□□□□ 0.01
GPC3-201ENST00000370818 RASGRF1Q13972 1273 aa15.1■□□□□ 0.01
GPC3-201ENST00000370818 UBE3CQ15386 1083 aa15.1■□□□□ 0.01
GPC3-201ENST00000370818 ZSCAN25Q6NSZ9 544 aa15.1■□□□□ 0.01
GPC3-201ENST00000370818 CTNNA3Q9UI47 895 aa15.1■□□□□ 0.01
GPC3-201ENST00000370818 WWC3Q9ULE0 1092 aa15.1■□□□□ 0.01
GPC3-201ENST00000370818 ATP6V1DQ9Y5K8 247 aa15.1■□□□□ 0.01
GPC3-201ENST00000370818 LAMA4Q16363 1823 aa15.1■□□□□ 0.01
GPC3-201ENST00000370818 JAK2O60674 1132 aa15.1■□□□□ 0.01
GPC3-201ENST00000370818 SCRN1Q12765 414 aa15.1■□□□□ 0.01
GPC3-201ENST00000370818 RC3H1Q5TC82 1133 aaKnown RBP15.1■□□□□ 0.01
GPC3-201ENST00000370818 CDC37L1Q7L3B6 337 aa15.1■□□□□ 0.01
GPC3-201ENST00000370818 SPATA5Q8NB90 893 aa15.1■□□□□ 0.01
GPC3-201ENST00000370818 BCL11BQ9C0K0 894 aaPredicted RBP15.1■□□□□ 0.01
GPC3-201ENST00000370818 TCRBV5S4A2TA0A5A2 114 aa15.09■□□□□ 0.01
GPC3-201ENST00000370818 PDCP20941 246 aa15.09■□□□□ 0.01
GPC3-201ENST00000370818 HAND2P61296 217 aa15.09■□□□□ 0.01
GPC3-201ENST00000370818 CHRNDQ07001 517 aa15.09■□□□□ 0.01
GPC3-201ENST00000370818 TBC1D9BQ66K14 1250 aa15.09■□□□□ 0.01
GPC3-201ENST00000370818 CHST3Q7LGC8 479 aa15.09■□□□□ 0.01
GPC3-201ENST00000370818 TSC1Q92574 1164 aa15.09■□□□□ 0.01
GPC3-201ENST00000370818 ZNF532Q9HCE3 1301 aa15.09■□□□□ 0.01
GPC3-201ENST00000370818 RGL2O15211 777 aa15.09■□□□□ 0.01
GPC3-201ENST00000370818 PFKFB2O60825 505 aa15.09■□□□□ 0.01
GPC3-201ENST00000370818 PDIA4P13667 645 aaKnown RBP15.09■□□□□ 0.01
GPC3-201ENST00000370818 PDE6AP16499 860 aa15.09■□□□□ 0.01
GPC3-201ENST00000370818 DNM1Q05193 864 aaKnown RBP15.09■□□□□ 0.01
GPC3-201ENST00000370818 IMMTQ16891 758 aaKnown RBP15.09■□□□□ 0.01
GPC3-201ENST00000370818 MYH7P12883 1935 aa15.08■□□□□ 0.01
GPC3-201ENST00000370818 BTAF1O14981 1849 aa15.08■□□□□ 0
GPC3-201ENST00000370818 RPS6KA4O75676 772 aa15.08■□□□□ 0
GPC3-201ENST00000370818 APOBRQ0VD83 1088 aa15.08■□□□□ 0
GPC3-201ENST00000370818 SF3B3Q15393 1217 aaKnown RBP15.08■□□□□ 0
GPC3-201ENST00000370818 BICDL1Q6ZP65 573 aa15.08■□□□□ 0
GPC3-201ENST00000370818 TMEM51Q9NW97 253 aa15.08■□□□□ 0
GPC3-201ENST00000370818 SRP68Q9UHB9 627 aaKnown RBP15.08■□□□□ 0
GPC3-201ENST00000370818 TCHHQ07283 1943 aa15.08■□□□□ 0
GPC3-201ENST00000370818 BCAMP50895 628 aa15.08■□□□□ 0
GPC3-201ENST00000370818 AMIGO3Q86WK7 504 aa15.08■□□□□ 0
GPC3-201ENST00000370818 FBXL16Q8N461 479 aa15.08■□□□□ 0
GPC3-201ENST00000370818 NARFQ9UHQ1 456 aa15.08■□□□□ 0
GPC3-201ENST00000370818 GJD4Q96KN9 370 aaPredicted RBP15.07■□□□□ 0
GPC3-201ENST00000370818 CDC5LQ99459 802 aaKnown RBP15.07■□□□□ 0
GPC3-201ENST00000370818 SCN7AQ01118 1682 aa15.07■□□□□ 0
GPC3-201ENST00000370818 NHSQ6T4R5 1651 aa15.07■□□□□ 0
GPC3-201ENST00000370818 GNPATO15228 680 aa15.07■□□□□ 0
GPC3-201ENST00000370818 FIBPO43427 364 aa15.07■□□□□ 0
GPC3-201ENST00000370818 GTF2F1P35269 517 aaKnown RBP eCLIP15.07■□□□□ 07e-8■■■■□ 26.3
GPC3-201ENST00000370818 FERMT3Q86UX7 667 aa15.07■□□□□ 0
GPC3-201ENST00000370818 SMARCC2Q8TAQ2 1214 aa15.07■□□□□ 0
GPC3-201ENST00000370818 NBPF3Q9H094 633 aa15.07■□□□□ 0
GPC3-201ENST00000370818 CCNL1Q9UK58 526 aaPredicted RBP15.07■□□□□ 0
GPC3-201ENST00000370818 MYO5AQ9Y4I1 1855 aaKnown RBP15.07■□□□□ 0
Retrieved 100 of 20,778 RNA–protein pairs in 27.8 ms