RNA–Protein interactions for RNA: ENST00000368843.7

SNX27-203, Transcript of sorting nexin family member 27, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SNX27, Length 7,197 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX27-203ENST00000368843 MRPL50Q8N5N7 158 aaKnown RBP20.33■□□□□ 0.85
SNX27-203ENST00000368843 IQCGQ9H095 443 aaKnown RBP20.33■□□□□ 0.85
SNX27-203ENST00000368843 RASAL2Q9UJF2 1139 aa20.33■□□□□ 0.84
SNX27-203ENST00000368843 URB2Q14146 1524 aaKnown RBP20.33■□□□□ 0.84
SNX27-203ENST00000368843 RAPGEF6Q8TEU7 1601 aa20.32■□□□□ 0.84
SNX27-203ENST00000368843 CALML3P27482 149 aa20.32■□□□□ 0.84
SNX27-203ENST00000368843 STK32BQ9NY57 414 aa20.32■□□□□ 0.84
SNX27-203ENST00000368843 APOBRQ0VD83 1088 aa20.32■□□□□ 0.84
SNX27-203ENST00000368843 DDX12PQ92771 950 aa20.32■□□□□ 0.84
SNX27-203ENST00000368843 TMOD4Q9NZQ9 345 aa20.32■□□□□ 0.84
SNX27-203ENST00000368843 MAP3K5Q99683 1374 aa20.32■□□□□ 0.84
SNX27-203ENST00000368843 PARP1P09874 1014 aaKnown RBP20.32■□□□□ 0.84
SNX27-203ENST00000368843 UFL1O94874 794 aa20.31■□□□□ 0.84
SNX27-203ENST00000368843 CCDC63Q8NA47 563 aa20.31■□□□□ 0.84
SNX27-203ENST00000368843 CNBD1Q8NA66 436 aa20.31■□□□□ 0.84
SNX27-203ENST00000368843 MRPS27Q92552 414 aaKnown RBP20.31■□□□□ 0.84
SNX27-203ENST00000368843 TRIM75PA6NK02 468 aa20.31■□□□□ 0.84
SNX27-203ENST00000368843 BICC1Q9H694 974 aaKnown RBP20.31■□□□□ 0.84
SNX27-203ENST00000368843 GPCPD1Q9NPB8 672 aa20.31■□□□□ 0.84
SNX27-203ENST00000368843 ZSCAN23Q3MJ62 389 aa20.31■□□□□ 0.84
SNX27-203ENST00000368843 SPECC1LQ69YQ0 1117 aa20.3■□□□□ 0.84
SNX27-203ENST00000368843 RAB3IL1Q8TBN0 382 aa20.3■□□□□ 0.84
SNX27-203ENST00000368843 RTL1A6NKG5 1358 aa20.3■□□□□ 0.84
SNX27-203ENST00000368843 AOPEPQ8N6M6 819 aa20.3■□□□□ 0.84
SNX27-203ENST00000368843 HARSP12081 509 aaKnown RBP20.3■□□□□ 0.84
SNX27-203ENST00000368843 CEP83Q9Y592 693 aa20.3■□□□□ 0.84
SNX27-203ENST00000368843 DUOX2Q9NRD8 1548 aa20.3■□□□□ 0.84
SNX27-203ENST00000368843 HCLS1P14317 486 aaPredicted RBP20.3■□□□□ 0.84
SNX27-203ENST00000368843 NDC80O14777 642 aa20.3■□□□□ 0.84
SNX27-203ENST00000368843 CCNL1Q9UK58 526 aaPredicted RBP20.3■□□□□ 0.84
SNX27-203ENST00000368843 DDX23Q9BUQ8 820 aaKnown RBP20.29■□□□□ 0.84
SNX27-203ENST00000368843 ASXL2Q76L83 1435 aa20.29■□□□□ 0.84
SNX27-203ENST00000368843 PLCB3Q01970 1234 aa20.29■□□□□ 0.84
SNX27-203ENST00000368843 PROCA1Q8NCQ7 364 aaPredicted RBP20.29■□□□□ 0.84
SNX27-203ENST00000368843 SMIM23A6NLE4 172 aa20.29■□□□□ 0.84
SNX27-203ENST00000368843 PRPHP41219 470 aa20.29■□□□□ 0.84
SNX27-203ENST00000368843 USP48Q86UV5 1035 aa20.29■□□□□ 0.84
SNX27-203ENST00000368843 NOD1Q9Y239 953 aa20.29■□□□□ 0.84
SNX27-203ENST00000368843 GNA11P29992 359 aa20.28■□□□□ 0.84
SNX27-203ENST00000368843 EIF6P56537 245 aaKnown RBP20.28■□□□□ 0.84
SNX27-203ENST00000368843 TEX11Q8IYF3 940 aa20.28■□□□□ 0.84
SNX27-203ENST00000368843 A2MP01023 1474 aa20.28■□□□□ 0.84
SNX27-203ENST00000368843 ARHGAP45Q92619 1136 aa20.28■□□□□ 0.84
SNX27-203ENST00000368843 KIF4AO95239 1232 aa20.28■□□□□ 0.84
SNX27-203ENST00000368843 MXRA7P84157 204 aa20.28■□□□□ 0.84
SNX27-203ENST00000368843 DTHD1Q6ZMT9 781 aa20.28■□□□□ 0.84
SNX27-203ENST00000368843 FAM170AA1A519 330 aa20.28■□□□□ 0.84
SNX27-203ENST00000368843 DCAF17Q5H9S7 520 aaPredicted RBP20.28■□□□□ 0.84
SNX27-203ENST00000368843 C6orf163Q5TEZ5 329 aa20.28■□□□□ 0.84
SNX27-203ENST00000368843 DCAF5Q96JK2 942 aa20.28■□□□□ 0.84
SNX27-203ENST00000368843 ZYXQ15942 572 aaKnown RBP20.28■□□□□ 0.84
SNX27-203ENST00000368843 HS2ST1Q7LGA3 356 aa20.28■□□□□ 0.84
SNX27-203ENST00000368843 FLT4P35916 1363 aa20.27■□□□□ 0.84
SNX27-203ENST00000368843 C19orf44Q9H6X5 657 aa20.27■□□□□ 0.84
SNX27-203ENST00000368843 ZNF608Q9ULD9 1512 aaPredicted RBP20.27■□□□□ 0.84
SNX27-203ENST00000368843 CHMP2AO43633 222 aa20.27■□□□□ 0.84
SNX27-203ENST00000368843 UBXN1Q04323 297 aa20.27■□□□□ 0.84
SNX27-203ENST00000368843 CCDC117Q8IWD4 279 aaPredicted RBP20.27■□□□□ 0.84
SNX27-203ENST00000368843 ANKRD44Q8N8A2 993 aa20.27■□□□□ 0.84
SNX27-203ENST00000368843 NEK11Q8NG66 645 aa20.27■□□□□ 0.84
SNX27-203ENST00000368843 EIF4G3O43432 1585 aaKnown RBP20.27■□□□□ 0.84
SNX27-203ENST00000368843 PPARDQ03181 441 aa20.27■□□□□ 0.84
SNX27-203ENST00000368843 DENND2AQ9ULE3 1009 aa20.27■□□□□ 0.84
SNX27-203ENST00000368843 SYCP2Q9BX26 1530 aa20.27■□□□□ 0.84
SNX27-203ENST00000368843 RPRD2Q5VT52 1461 aaKnown RBP20.27■□□□□ 0.84
SNX27-203ENST00000368843 KRT5P13647 590 aa20.27■□□□□ 0.83
SNX27-203ENST00000368843 MSANTD4Q8NCY6 345 aa20.27■□□□□ 0.83
SNX27-203ENST00000368843 SH2D4AQ9H788 454 aa20.27■□□□□ 0.83
SNX27-203ENST00000368843 RBM28Q9NW13 759 aaKnown RBP20.27■□□□□ 0.83
SNX27-203ENST00000368843 RNMTO43148 476 aaKnown RBP20.26■□□□□ 0.83
SNX27-203ENST00000368843 BICDL2A1A5D9 508 aa20.26■□□□□ 0.83
SNX27-203ENST00000368843 HDAC1Q13547 482 aaPredicted RBP20.26■□□□□ 0.83
SNX27-203ENST00000368843 TRAF3IP1Q8TDR0 691 aaPredicted RBP20.26■□□□□ 0.83
SNX27-203ENST00000368843 DNM1Q05193 864 aaKnown RBP20.26■□□□□ 0.83
SNX27-203ENST00000368843 MAK16Q9BXY0 300 aaKnown RBP20.26■□□□□ 0.83
SNX27-203ENST00000368843 STX17P56962 302 aa20.26■□□□□ 0.83
SNX27-203ENST00000368843 PRKG1Q13976 671 aa20.26■□□□□ 0.83
SNX27-203ENST00000368843 SPTLC2O15270 562 aa20.26■□□□□ 0.83
SNX27-203ENST00000368843 MBD4O95243 580 aa20.26■□□□□ 0.83
SNX27-203ENST00000368843 NOL12Q9UGY1 213 aaKnown RBP eCLIP20.26■□□□□ 0.83
SNX27-203ENST00000368843 V9GYY5 206 aaPredicted RBP20.26■□□□□ 0.83
SNX27-203ENST00000368843 NPATQ14207 1427 aa20.25■□□□□ 0.83
SNX27-203ENST00000368843 CAPZA3Q96KX2 299 aa20.25■□□□□ 0.83
SNX27-203ENST00000368843 TTC6Q86TZ1 520 aa20.25■□□□□ 0.83
SNX27-203ENST00000368843 GCP02774 474 aa20.25■□□□□ 0.83
SNX27-203ENST00000368843 LINS1Q8NG48 757 aa20.25■□□□□ 0.83
SNX27-203ENST00000368843 TACC1O75410 805 aa20.24■□□□□ 0.83
SNX27-203ENST00000368843 SPAG1Q07617 926 aa20.24■□□□□ 0.83
SNX27-203ENST00000368843 CREB3L3Q68CJ9 461 aa20.24■□□□□ 0.83
SNX27-203ENST00000368843 LMBR1Q8WVP7 490 aa20.24■□□□□ 0.83
SNX27-203ENST00000368843 TBC1D32Q96NH3 1257 aa20.24■□□□□ 0.83
SNX27-203ENST00000368843 ARHGEF10LQ9HCE6 1279 aa20.24■□□□□ 0.83
SNX27-203ENST00000368843 UVSSAQ2YD98 709 aa20.24■□□□□ 0.83
SNX27-203ENST00000368843 DNAJC25Q9H1X3 360 aa20.24■□□□□ 0.83
SNX27-203ENST00000368843 GPHNQ9NQX3 736 aaPredicted RBP20.24■□□□□ 0.83
SNX27-203ENST00000368843 CAVIN2O95810 425 aa20.24■□□□□ 0.83
SNX27-203ENST00000368843 FCHSD1Q86WN1 690 aa20.24■□□□□ 0.83
SNX27-203ENST00000368843 ZMYND15Q9H091 742 aa20.23■□□□□ 0.83
SNX27-203ENST00000368843 TTC41PQ6P2S7 1318 aa20.23■□□□□ 0.83
SNX27-203ENST00000368843 RAPGEF1Q13905 1077 aa20.23■□□□□ 0.83
Retrieved 100 of 20,778 RNA–protein pairs in 89.8 ms