RNA–Protein interactions for RNA: ENST00000368690.7

CHTOP-203, Transcript of chromatin target of PRMT1, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene CHTOP, Length 2,165 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHTOP-203ENST00000368690 ATP5JP18859 108 aa20.23■□□□□ 0.83
CHTOP-203ENST00000368690 TMCO3Q6UWJ1 677 aa20.23■□□□□ 0.83
CHTOP-203ENST00000368690 KAZALD1Q96I82 304 aa20.23■□□□□ 0.83
CHTOP-203ENST00000368690 UBXN6Q9BZV1 441 aa20.23■□□□□ 0.83
CHTOP-203ENST00000368690 TLR7Q9NYK1 1049 aaKnown RBP20.23■□□□□ 0.83
CHTOP-203ENST00000368690 KIAA1468Q9P260 1216 aa20.23■□□□□ 0.83
CHTOP-203ENST00000368690 COL15A1P39059 1388 aa20.23■□□□□ 0.83
CHTOP-203ENST00000368690 CEBPZQ03701 1054 aaKnown RBP20.22■□□□□ 0.83
CHTOP-203ENST00000368690 NFATC2IPQ8NCF5 419 aa20.22■□□□□ 0.83
CHTOP-203ENST00000368690 UBXN4Q92575 508 aa20.22■□□□□ 0.83
CHTOP-203ENST00000368690 SUCLG2Q96I99 432 aa20.22■□□□□ 0.83
CHTOP-203ENST00000368690 XPO4Q9C0E2 1151 aaKnown RBP20.22■□□□□ 0.83
CHTOP-203ENST00000368690 RTEL1Q9NZ71 1219 aa20.22■□□□□ 0.83
CHTOP-203ENST00000368690 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP20.22■□□□□ 0.83
CHTOP-203ENST00000368690 LAMA4Q16363 1823 aa20.22■□□□□ 0.83
CHTOP-203ENST00000368690 ME1P48163 572 aa20.22■□□□□ 0.83
CHTOP-203ENST00000368690 TICAM2Q86XR7 235 aa20.22■□□□□ 0.83
CHTOP-203ENST00000368690 CCDC9Q9Y3X0 531 aaKnown RBP20.22■□□□□ 0.83
CHTOP-203ENST00000368690 PLCH1Q4KWH8 1693 aa20.22■□□□□ 0.83
CHTOP-203ENST00000368690 HEG1Q9ULI3 1381 aa20.22■□□□□ 0.83
CHTOP-203ENST00000368690 EFCAB8A8MWE9 144 aa20.21■□□□□ 0.83
CHTOP-203ENST00000368690 MUM1L1Q5H9M0 696 aa20.21■□□□□ 0.83
CHTOP-203ENST00000368690 DHX32Q7L7V1 743 aaKnown RBP20.21■□□□□ 0.83
CHTOP-203ENST00000368690 TMC6Q7Z403 805 aa20.21■□□□□ 0.83
CHTOP-203ENST00000368690 FCHSD1Q86WN1 690 aa20.21■□□□□ 0.83
CHTOP-203ENST00000368690 TXLNBQ8N3L3 684 aa20.21■□□□□ 0.83
CHTOP-203ENST00000368690 BICC1Q9H694 974 aaKnown RBP20.21■□□□□ 0.83
CHTOP-203ENST00000368690 SLC52A2Q9HAB3 445 aa20.21■□□□□ 0.83
CHTOP-203ENST00000368690 PLEKHG2Q9H7P9 1386 aa20.21■□□□□ 0.83
CHTOP-203ENST00000368690 PTPDC1A2A3K4 754 aa20.21■□□□□ 0.83
CHTOP-203ENST00000368690 CTDNEP1O95476 244 aa20.21■□□□□ 0.83
CHTOP-203ENST00000368690 CYP21A2P08686 494 aa20.21■□□□□ 0.83
CHTOP-203ENST00000368690 ZRSR1Q15695 479 aaKnown RBP20.21■□□□□ 0.83
CHTOP-203ENST00000368690 C8orf37Q96NL8 207 aa20.21■□□□□ 0.83
CHTOP-203ENST00000368690 SDF4Q9BRK5 362 aa20.21■□□□□ 0.83
CHTOP-203ENST00000368690 IFNKQ9P0W0 207 aa20.21■□□□□ 0.83
CHTOP-203ENST00000368690 ZBTB22O15209 634 aa20.2■□□□□ 0.82
CHTOP-203ENST00000368690 CCDC158Q5M9N0 1113 aa20.2■□□□□ 0.82
CHTOP-203ENST00000368690 BCL11BQ9C0K0 894 aaPredicted RBP20.2■□□□□ 0.82
CHTOP-203ENST00000368690 DNAI1Q9UI46 699 aa20.2■□□□□ 0.82
CHTOP-203ENST00000368690 PCDHA7Q9UN72 937 aa20.2■□□□□ 0.82
CHTOP-203ENST00000368690 SCN11AQ9UI33 1791 aa20.19■□□□□ 0.82
CHTOP-203ENST00000368690 IKBKBO14920 756 aa20.19■□□□□ 0.82
CHTOP-203ENST00000368690 SMC2O95347 1197 aa20.19■□□□□ 0.82
CHTOP-203ENST00000368690 ANXA1P04083 346 aa20.19■□□□□ 0.82
CHTOP-203ENST00000368690 HNRNPH2P55795 449 aaKnown RBP20.19■□□□□ 0.82
CHTOP-203ENST00000368690 CABP4P57796 275 aa20.19■□□□□ 0.82
CHTOP-203ENST00000368690 SLC39A6Q13433 755 aa20.19■□□□□ 0.82
CHTOP-203ENST00000368690 MCMDC2Q4G0Z9 681 aa20.19■□□□□ 0.82
CHTOP-203ENST00000368690 FTOQ9C0B1 505 aaKnown RBP eCLIP20.19■□□□□ 0.82
CHTOP-203ENST00000368690 TADA3O75528 432 aa20.19■□□□□ 0.82
CHTOP-203ENST00000368690 NLRP12P59046 1061 aa20.19■□□□□ 0.82
CHTOP-203ENST00000368690 LRRN4CLQ8ND94 238 aa20.19■□□□□ 0.82
CHTOP-203ENST00000368690 ZNF609O15014 1411 aa20.19■□□□□ 0.82
CHTOP-203ENST00000368690 NPHP1O15259 732 aa20.18■□□□□ 0.82
CHTOP-203ENST00000368690 DDX58O95786 925 aaKnown RBP20.18■□□□□ 0.82
CHTOP-203ENST00000368690 CWF19L2Q2TBE0 894 aaKnown RBP20.18■□□□□ 0.82
CHTOP-203ENST00000368690 LRRFIP1Q32MZ4 808 aaKnown RBP20.18■□□□□ 0.82
CHTOP-203ENST00000368690 MYO1BO43795 1136 aa20.18■□□□□ 0.82
CHTOP-203ENST00000368690 YEATS4O95619 227 aa20.18■□□□□ 0.82
CHTOP-203ENST00000368690 CAPN2P17655 700 aa20.18■□□□□ 0.82
CHTOP-203ENST00000368690 DPCR1Q3MIW9 517 aa20.18■□□□□ 0.82
CHTOP-203ENST00000368690 TRIM65Q6PJ69 517 aa20.18■□□□□ 0.82
CHTOP-203ENST00000368690 ILDR1Q86SU0 546 aaPredicted RBP20.18■□□□□ 0.82
CHTOP-203ENST00000368690 HOMER1Q86YM7 354 aa20.18■□□□□ 0.82
CHTOP-203ENST00000368690 MNS1Q8NEH6 495 aa20.18■□□□□ 0.82
CHTOP-203ENST00000368690 KCNG4Q8TDN1 519 aa20.18■□□□□ 0.82
CHTOP-203ENST00000368690 ZNF274Q96GC6 653 aaPredicted RBP20.18■□□□□ 0.82
CHTOP-203ENST00000368690 NGLY1Q96IV0 654 aa20.18■□□□□ 0.82
CHTOP-203ENST00000368690 TMX1Q9H3N1 280 aa20.18■□□□□ 0.82
CHTOP-203ENST00000368690 NEDD4P46934 1319 aa20.17■□□□□ 0.82
CHTOP-203ENST00000368690 SH3TC1Q8TE82 1336 aa20.17■□□□□ 0.82
CHTOP-203ENST00000368690 EXOSC10Q01780 885 aaKnown RBP20.17■□□□□ 0.82
CHTOP-203ENST00000368690 NCAPHQ15003 741 aa20.17■□□□□ 0.82
CHTOP-203ENST00000368690 LINC00301Q8NCQ3 95 aa20.17■□□□□ 0.82
CHTOP-203ENST00000368690 ADAMTS7Q9UKP4 1686 aa20.16■□□□□ 0.82
CHTOP-203ENST00000368690 A0A087WWV3 80 aa20.16■□□□□ 0.82
CHTOP-203ENST00000368690 HSPA1LP34931 641 aa20.16■□□□□ 0.82
CHTOP-203ENST00000368690 FBXL16Q8N461 479 aa20.16■□□□□ 0.82
CHTOP-203ENST00000368690 RGS22Q8NE09 1264 aa20.16■□□□□ 0.82
CHTOP-203ENST00000368690 POLR3EQ9NVU0 708 aa20.16■□□□□ 0.82
CHTOP-203ENST00000368690 CBFA2T2O43439 604 aa20.15■□□□□ 0.82
CHTOP-203ENST00000368690 NDUFA8P51970 172 aa20.15■□□□□ 0.82
CHTOP-203ENST00000368690 GPS2Q13227 327 aa20.15■□□□□ 0.82
CHTOP-203ENST00000368690 ZNF790Q6PG37 636 aa20.15■□□□□ 0.82
CHTOP-203ENST00000368690 TTC5Q8N0Z6 440 aa20.15■□□□□ 0.82
CHTOP-203ENST00000368690 IPO4Q8TEX9 1081 aaKnown RBP20.15■□□□□ 0.82
CHTOP-203ENST00000368690 COPRSQ9NQ92 184 aa20.15■□□□□ 0.82
CHTOP-203ENST00000368690 SIPA1L3O60292 1781 aaPredicted RBP20.15■□□□□ 0.82
CHTOP-203ENST00000368690 SLC3A2P08195 630 aaKnown RBP20.15■□□□□ 0.82
CHTOP-203ENST00000368690 STOX1Q6ZVD7 989 aa20.15■□□□□ 0.82
CHTOP-203ENST00000368690 MPHOSPH8Q99549 860 aa20.15■□□□□ 0.82
CHTOP-203ENST00000368690 DSCC1Q9BVC3 393 aa20.15■□□□□ 0.82
CHTOP-203ENST00000368690 CARMIL3Q8ND23 1372 aa20.14■□□□□ 0.82
CHTOP-203ENST00000368690 FANCCQ00597 558 aa20.14■□□□□ 0.81
CHTOP-203ENST00000368690 PROSER3Q2NL68 480 aa20.14■□□□□ 0.81
CHTOP-203ENST00000368690 HAUS7Q99871 368 aa20.14■□□□□ 0.81
CHTOP-203ENST00000368690 GOLGA6L9A6NEM1 432 aa20.14■□□□□ 0.81
CHTOP-203ENST00000368690 ZSCAN12O43309 604 aa20.14■□□□□ 0.81
CHTOP-203ENST00000368690 GPR161Q8N6U8 529 aaKnown RBP20.14■□□□□ 0.81
Retrieved 100 of 20,778 RNA–protein pairs in 22.7 ms