RNA–Protein interactions for RNA: ENST00000368215.7

PTPRK-206, Transcript of protein tyrosine phosphatase, receptor type K, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PTPRK, Length 4,651 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRK-206ENST00000368215 RIMBP3BA6NNM3 1639 aa9.77□□□□□ -0.84
PTPRK-206ENST00000368215 RIMBP3Q9UFD9 1639 aa9.77□□□□□ -0.84
PTPRK-206ENST00000368215 TOP1P11387 765 aaKnown RBP9.77□□□□□ -0.84
PTPRK-206ENST00000368215 PHKBQ93100 1093 aa9.77□□□□□ -0.84
PTPRK-206ENST00000368215 CDK5RAP3Q96JB5 506 aa9.77□□□□□ -0.84
PTPRK-206ENST00000368215 KRT23Q9C075 422 aa9.77□□□□□ -0.84
PTPRK-206ENST00000368215 PDE8AO60658 829 aa9.77□□□□□ -0.85
PTPRK-206ENST00000368215 NECTIN1Q15223 517 aa9.77□□□□□ -0.85
PTPRK-206ENST00000368215 SOGA3Q5TF21 947 aa9.77□□□□□ -0.85
PTPRK-206ENST00000368215 NAA16Q6N069 864 aaPredicted RBP9.77□□□□□ -0.85
PTPRK-206ENST00000368215 PDCL2Q8N4E4 241 aa9.77□□□□□ -0.85
PTPRK-206ENST00000368215 NRKQ7Z2Y5 1582 aa9.77□□□□□ -0.85
PTPRK-206ENST00000368215 A0A0U1RQG5 324 aaPredicted RBP9.77□□□□□ -0.85
PTPRK-206ENST00000368215 PDE4CQ08493 712 aa9.77□□□□□ -0.85
PTPRK-206ENST00000368215 PPP1R9BQ96SB3 815 aa9.77□□□□□ -0.85
PTPRK-206ENST00000368215 DSCC1Q9BVC3 393 aa9.77□□□□□ -0.85
PTPRK-206ENST00000368215 CBX8Q9HC52 389 aa9.77□□□□□ -0.85
PTPRK-206ENST00000368215 ZNF532Q9HCE3 1301 aa9.77□□□□□ -0.85
PTPRK-206ENST00000368215 SKILP12757 684 aa9.77□□□□□ -0.85
PTPRK-206ENST00000368215 CTDSPL2Q05D32 466 aa9.77□□□□□ -0.85
PTPRK-206ENST00000368215 MTX1Q13505 466 aa9.77□□□□□ -0.85
PTPRK-206ENST00000368215 GREM2Q9H772 168 aa9.77□□□□□ -0.85
PTPRK-206ENST00000368215 ARGLU1Q9NWB6 273 aaPredicted RBP9.77□□□□□ -0.85
PTPRK-206ENST00000368215 NR1I2O75469 434 aa9.76□□□□□ -0.85
PTPRK-206ENST00000368215 AFMP43652 599 aa9.76□□□□□ -0.85
PTPRK-206ENST00000368215 ESR2Q92731 530 aa9.76□□□□□ -0.85
PTPRK-206ENST00000368215 C8orf37Q96NL8 207 aa9.76□□□□□ -0.85
PTPRK-206ENST00000368215 PRDM1O75626 825 aa9.76□□□□□ -0.85
PTPRK-206ENST00000368215 CAVIN2O95810 425 aa9.76□□□□□ -0.85
PTPRK-206ENST00000368215 NAP1L1P55209 391 aaKnown RBP9.76□□□□□ -0.85
PTPRK-206ENST00000368215 SCRN1Q12765 414 aa9.76□□□□□ -0.85
PTPRK-206ENST00000368215 PUM3Q15397 648 aaKnown RBP9.76□□□□□ -0.85
PTPRK-206ENST00000368215 IFIT1BQ5T764 474 aaKnown RBP9.76□□□□□ -0.85
PTPRK-206ENST00000368215 ZNF444Q8N0Y2 327 aaPredicted RBP9.76□□□□□ -0.85
PTPRK-206ENST00000368215 CLSTN2Q9H4D0 955 aa9.76□□□□□ -0.85
PTPRK-206ENST00000368215 CNNM2Q9H8M5 875 aa9.76□□□□□ -0.85
PTPRK-206ENST00000368215 MAGEC2Q9UBF1 373 aaPredicted RBP9.76□□□□□ -0.85
PTPRK-206ENST00000368215 CEP170BQ9Y4F5 1589 aaPredicted RBP9.76□□□□□ -0.85
PTPRK-206ENST00000368215 ADGRL3Q9HAR2 1447 aa9.76□□□□□ -0.85
PTPRK-206ENST00000368215 FGAP02671 866 aa9.76□□□□□ -0.85
PTPRK-206ENST00000368215 RBM5P52756 815 aaKnown RBP eCLIP9.76□□□□□ -0.85
PTPRK-206ENST00000368215 LLPHQ9BRT6 129 aaKnown RBP9.76□□□□□ -0.85
PTPRK-206ENST00000368215 VAT1LQ9HCJ6 419 aa9.76□□□□□ -0.85
PTPRK-206ENST00000368215 TECPR2O15040 1411 aa9.76□□□□□ -0.85
PTPRK-206ENST00000368215 MAGEB6P1A0A0J9YX57 407 aa9.76□□□□□ -0.85
PTPRK-206ENST00000368215 CCP110O43303 1012 aa9.76□□□□□ -0.85
PTPRK-206ENST00000368215 SSBP05455 408 aaKnown RBP eCLIP9.76□□□□□ -0.85
PTPRK-206ENST00000368215 FAM160A1Q05DH4 1040 aa9.76□□□□□ -0.85
PTPRK-206ENST00000368215 SMARCE1Q969G3 411 aa9.76□□□□□ -0.85
PTPRK-206ENST00000368215 NLRP3Q96P20 1036 aa9.76□□□□□ -0.85
PTPRK-206ENST00000368215 USP28Q96RU2 1077 aa9.76□□□□□ -0.85
PTPRK-206ENST00000368215 SETDB2Q96T68 719 aa9.76□□□□□ -0.85
PTPRK-206ENST00000368215 STX8Q9UNK0 236 aa9.76□□□□□ -0.85
PTPRK-206ENST00000368215 ANGEL1Q9UNK9 670 aaKnown RBP9.76□□□□□ -0.85
PTPRK-206ENST00000368215 CHGBP05060 677 aa9.75□□□□□ -0.85
PTPRK-206ENST00000368215 CBX1P83916 185 aa9.75□□□□□ -0.85
PTPRK-206ENST00000368215 KIF18AQ8NI77 898 aa9.75□□□□□ -0.85
PTPRK-206ENST00000368215 PRDM10Q9NQV6 1147 aa9.75□□□□□ -0.85
PTPRK-206ENST00000368215 ZBTB1Q9Y2K1 713 aa9.75□□□□□ -0.85
PTPRK-206ENST00000368215 SPECC1Q5M775 1068 aa9.75□□□□□ -0.85
PTPRK-206ENST00000368215 FTOQ9C0B1 505 aaKnown RBP eCLIP9.75□□□□□ -0.85
PTPRK-206ENST00000368215 ZHX3Q9H4I2 956 aa9.75□□□□□ -0.85
PTPRK-206ENST00000368215 WDR17Q8IZU2 1322 aa9.75□□□□□ -0.85
PTPRK-206ENST00000368215 C6orf229H3BNL8 230 aa9.75□□□□□ -0.85
PTPRK-206ENST00000368215 CTSWP56202 376 aa9.75□□□□□ -0.85
PTPRK-206ENST00000368215 ZSCAN29Q8IWY8 852 aaPredicted RBP9.75□□□□□ -0.85
PTPRK-206ENST00000368215 SPATA31D1Q6ZQQ2 1576 aa9.75□□□□□ -0.85
PTPRK-206ENST00000368215 URI1O94763 535 aaPredicted RBP9.74□□□□□ -0.85
PTPRK-206ENST00000368215 ADD1P35611 737 aaKnown RBP9.74□□□□□ -0.85
PTPRK-206ENST00000368215 UBASH3AP57075 661 aa9.74□□□□□ -0.85
PTPRK-206ENST00000368215 SYNE4Q8N205 404 aa9.74□□□□□ -0.85
PTPRK-206ENST00000368215 GOLGA6L1Q8N7Z2 621 aa9.74□□□□□ -0.85
PTPRK-206ENST00000368215 ZBTB38Q8NAP3 1195 aaPredicted RBP9.74□□□□□ -0.85
PTPRK-206ENST00000368215 ADGRB2O60241 1585 aa9.74□□□□□ -0.85
PTPRK-206ENST00000368215 CCDC194A0A1B0GVG4 234 aa9.74□□□□□ -0.85
PTPRK-206ENST00000368215 RFC4P35249 363 aa9.74□□□□□ -0.85
PTPRK-206ENST00000368215 RPGRQ92834 1020 aaKnown RBP9.74□□□□□ -0.85
PTPRK-206ENST00000368215 MAST3O60307 1309 aa9.74□□□□□ -0.85
PTPRK-206ENST00000368215 A0A087WWV3 80 aa9.74□□□□□ -0.85
PTPRK-206ENST00000368215 PCCAP05165 728 aaPredicted RBP9.74□□□□□ -0.85
PTPRK-206ENST00000368215 PHKA1P46020 1223 aa9.74□□□□□ -0.85
PTPRK-206ENST00000368215 BRAPQ7Z569 592 aa9.74□□□□□ -0.85
PTPRK-206ENST00000368215 NOC3LQ8WTT2 800 aaKnown RBP9.74□□□□□ -0.85
PTPRK-206ENST00000368215 LPIN2Q92539 896 aa9.74□□□□□ -0.85
PTPRK-206ENST00000368215 CRNKL1Q9BZJ0 848 aaKnown RBP9.74□□□□□ -0.85
PTPRK-206ENST00000368215 IFNKQ9P0W0 207 aa9.74□□□□□ -0.85
PTPRK-206ENST00000368215 HEG1Q9ULI3 1381 aa9.74□□□□□ -0.85
PTPRK-206ENST00000368215 DIP2BQ9P265 1576 aa9.74□□□□□ -0.85
PTPRK-206ENST00000368215 hCG_1642624A0A1W2PR95 340 aa9.74□□□□□ -0.85
PTPRK-206ENST00000368215 PFKFB2O60825 505 aa9.74□□□□□ -0.85
PTPRK-206ENST00000368215 GSDMDP57764 484 aa9.74□□□□□ -0.85
PTPRK-206ENST00000368215 PDE4BQ07343 736 aa9.74□□□□□ -0.85
PTPRK-206ENST00000368215 STIM1Q13586 685 aa9.74□□□□□ -0.85
PTPRK-206ENST00000368215 ERBB4Q15303 1308 aa9.74□□□□□ -0.85
PTPRK-206ENST00000368215 ZMYM1Q5SVZ6 1142 aa9.74□□□□□ -0.85
PTPRK-206ENST00000368215 OSBP2Q969R2 916 aa9.74□□□□□ -0.85
PTPRK-206ENST00000368215 CARD10Q9BWT7 1032 aa9.74□□□□□ -0.85
PTPRK-206ENST00000368215 GPHNQ9NQX3 736 aaPredicted RBP9.74□□□□□ -0.85
PTPRK-206ENST00000368215 USP32Q8NFA0 1604 aa9.73□□□□□ -0.85
PTPRK-206ENST00000368215 M0R2C6 588 aa9.73□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 66.8 ms