RNA–Protein interactions for RNA: ENST00000368069.7

COPA-202, Transcript of coatomer protein complex subunit alpha, humanhuman

TSL 1 (best) BASIC

Gene COPA, Length 4,664 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPA-202ENST00000368069 GOLGA6L10A6NI86 522 aa13.39□□□□□ -0.27
COPA-202ENST00000368069 A1BGP04217 495 aa13.39□□□□□ -0.27
COPA-202ENST00000368069 PIP4K2BP78356 416 aa13.39□□□□□ -0.27
COPA-202ENST00000368069 SYCP1Q15431 976 aa13.39□□□□□ -0.27
COPA-202ENST00000368069 ZFYVE27Q5T4F4 411 aa13.39□□□□□ -0.27
COPA-202ENST00000368069 RRAGBQ5VZM2 374 aa13.39□□□□□ -0.27
COPA-202ENST00000368069 CCDC191Q8NCU4 936 aa13.39□□□□□ -0.27
COPA-202ENST00000368069 DHX58Q96C10 678 aa13.39□□□□□ -0.27
COPA-202ENST00000368069 PYM1Q9BRP8 204 aaKnown RBP13.39□□□□□ -0.27
COPA-202ENST00000368069 CRNKL1Q9BZJ0 848 aaKnown RBP13.39□□□□□ -0.27
COPA-202ENST00000368069 KRT222Q8N1A0 295 aa13.39□□□□□ -0.27
COPA-202ENST00000368069 XAGE2Q96GT9 111 aa13.39□□□□□ -0.27
COPA-202ENST00000368069 CCDC94Q9BW85 323 aaPredicted RBP13.39□□□□□ -0.27
COPA-202ENST00000368069 KAT6BQ8WYB5 2073 aa13.38□□□□□ -0.27
COPA-202ENST00000368069 TRIM75PA6NK02 468 aa13.38□□□□□ -0.27
COPA-202ENST00000368069 BMP15O95972 392 aa13.38□□□□□ -0.27
COPA-202ENST00000368069 CACNA2D4Q7Z3S7 1137 aa13.38□□□□□ -0.27
COPA-202ENST00000368069 TCP11L1Q9NUJ3 509 aa13.38□□□□□ -0.27
COPA-202ENST00000368069 ANKRD18AQ8IVF6 992 aa13.38□□□□□ -0.27
COPA-202ENST00000368069 TSPYL1Q9H0U9 437 aa13.38□□□□□ -0.27
COPA-202ENST00000368069 CENPHQ9H3R5 247 aa13.38□□□□□ -0.27
COPA-202ENST00000368069 ODF2Q5BJF6 829 aa13.38□□□□□ -0.27
COPA-202ENST00000368069 GTF3C6Q969F1 213 aa13.38□□□□□ -0.27
COPA-202ENST00000368069 QRICH2Q9H0J4 1663 aa13.38□□□□□ -0.27
COPA-202ENST00000368069 B4E1Z4 1266 aa13.37□□□□□ -0.27
COPA-202ENST00000368069 LIG1P18858 919 aa13.37□□□□□ -0.27
COPA-202ENST00000368069 TMEM266Q2M3C6 531 aa13.37□□□□□ -0.27
COPA-202ENST00000368069 PROSER3Q2NL68 480 aa13.37□□□□□ -0.27
COPA-202ENST00000368069 ADCK5Q3MIX3 580 aa13.37□□□□□ -0.27
COPA-202ENST00000368069 APPBP2Q92624 585 aa13.37□□□□□ -0.27
COPA-202ENST00000368069 TAF4BQ92750 862 aa13.37□□□□□ -0.27
COPA-202ENST00000368069 TSG101Q99816 390 aa13.37□□□□□ -0.27
COPA-202ENST00000368069 CPSF1Q10570 1443 aaKnown RBP13.37□□□□□ -0.27
COPA-202ENST00000368069 CUL4AQ13619 759 aa13.37□□□□□ -0.27
COPA-202ENST00000368069 NAA16Q6N069 864 aaPredicted RBP13.37□□□□□ -0.27
COPA-202ENST00000368069 RAB34Q9BZG1 259 aa13.37□□□□□ -0.27
COPA-202ENST00000368069 VAT1LQ9HCJ6 419 aa13.37□□□□□ -0.27
COPA-202ENST00000368069 MBD4O95243 580 aa13.37□□□□□ -0.27
COPA-202ENST00000368069 ZNF76P36508 570 aa13.37□□□□□ -0.27
COPA-202ENST00000368069 ANO1Q5XXA6 986 aa13.37□□□□□ -0.27
COPA-202ENST00000368069 NIP7Q9Y221 180 aaKnown RBP eCLIP13.37□□□□□ -0.27
COPA-202ENST00000368069 ELP1O95163 1332 aa13.37□□□□□ -0.27
COPA-202ENST00000368069 GPAA1O43292 621 aa13.37□□□□□ -0.27
COPA-202ENST00000368069 MAP9Q49MG5 647 aa13.37□□□□□ -0.27
COPA-202ENST00000368069 SYT10Q6XYQ8 523 aa13.37□□□□□ -0.27
COPA-202ENST00000368069 ACSBG1Q96GR2 724 aa13.37□□□□□ -0.27
COPA-202ENST00000368069 TRIM47Q96LD4 638 aa13.37□□□□□ -0.27
COPA-202ENST00000368069 ZKSCAN3Q9BRR0 538 aa13.37□□□□□ -0.27
COPA-202ENST00000368069 UTP14AQ9BVJ6 771 aaKnown RBP13.37□□□□□ -0.27
COPA-202ENST00000368069 RIOK3O14730 519 aaKnown RBP13.36□□□□□ -0.27
COPA-202ENST00000368069 GNAT2P19087 354 aa13.36□□□□□ -0.27
COPA-202ENST00000368069 ATP6V1AP38606 617 aa13.36□□□□□ -0.27
COPA-202ENST00000368069 MYRIPQ8NFW9 859 aa13.36□□□□□ -0.27
COPA-202ENST00000368069 SEC62Q99442 399 aaKnown RBP13.36□□□□□ -0.27
COPA-202ENST00000368069 MAGEB6P1A0A0J9YX57 407 aa13.36□□□□□ -0.27
COPA-202ENST00000368069 ZNF500O60304 480 aaPredicted RBP13.36□□□□□ -0.27
COPA-202ENST00000368069 IDEP14735 1019 aa13.36□□□□□ -0.27
COPA-202ENST00000368069 CCDC96Q2M329 555 aa13.36□□□□□ -0.27
COPA-202ENST00000368069 KRI1Q8N9T8 703 aaKnown RBP13.36□□□□□ -0.27
COPA-202ENST00000368069 SEPT11Q9NVA2 429 aaKnown RBP13.36□□□□□ -0.27
COPA-202ENST00000368069 STX8Q9UNK0 236 aa13.36□□□□□ -0.27
COPA-202ENST00000368069 POTEB2H3BUK9 544 aa13.36□□□□□ -0.27
COPA-202ENST00000368069 USO1O60763 962 aaKnown RBP13.36□□□□□ -0.27
COPA-202ENST00000368069 ITGA6P23229 1130 aa13.36□□□□□ -0.27
COPA-202ENST00000368069 TERF1P54274 439 aa13.36□□□□□ -0.27
COPA-202ENST00000368069 MYL5Q02045 173 aa13.36□□□□□ -0.27
COPA-202ENST00000368069 CTAGE1Q96RT6 745 aa13.36□□□□□ -0.27
COPA-202ENST00000368069 PLEKHG1Q9ULL1 1385 aa13.36□□□□□ -0.27
COPA-202ENST00000368069 ADGRB3O60242 1522 aa13.36□□□□□ -0.27
COPA-202ENST00000368069 STX17P56962 302 aa13.36□□□□□ -0.27
COPA-202ENST00000368069 ENOX2Q16206 610 aaKnown RBP13.36□□□□□ -0.27
COPA-202ENST00000368069 TAF3Q5VWG9 929 aa13.36□□□□□ -0.27
COPA-202ENST00000368069 RMND1Q9NWS8 449 aa13.36□□□□□ -0.27
COPA-202ENST00000368069 E7EWF7 191 aa13.35□□□□□ -0.27
COPA-202ENST00000368069 ERLIN2O94905 339 aa13.35□□□□□ -0.27
COPA-202ENST00000368069 FGFR1OPO95684 399 aaKnown RBP13.35□□□□□ -0.27
COPA-202ENST00000368069 DNA2P51530 1060 aa13.35□□□□□ -0.27
COPA-202ENST00000368069 TDRD12Q587J7 1177 aaKnown RBP13.35□□□□□ -0.27
COPA-202ENST00000368069 CALML4Q96GE6 196 aa13.35□□□□□ -0.27
COPA-202ENST00000368069 ARHGAP31Q2M1Z3 1444 aa13.35□□□□□ -0.27
COPA-202ENST00000368069 BAG3O95817 575 aa13.35□□□□□ -0.27
COPA-202ENST00000368069 GTF2F1P35269 517 aaKnown RBP eCLIP13.35□□□□□ -0.27
COPA-202ENST00000368069 STAT6P42226 847 aa13.35□□□□□ -0.27
COPA-202ENST00000368069 TTC6Q86TZ1 520 aa13.35□□□□□ -0.27
COPA-202ENST00000368069 ANGEL1Q9UNK9 670 aaKnown RBP13.35□□□□□ -0.27
COPA-202ENST00000368069 LDHCP07864 332 aa13.35□□□□□ -0.27
COPA-202ENST00000368069 SPTY2D1Q68D10 685 aaPredicted RBP13.35□□□□□ -0.27
COPA-202ENST00000368069 RTL9Q8NET4 1388 aa13.35□□□□□ -0.27
COPA-202ENST00000368069 TUBB4AP04350 444 aa13.34□□□□□ -0.27
COPA-202ENST00000368069 AMPD3Q01432 767 aa13.34□□□□□ -0.27
COPA-202ENST00000368069 DSCC1Q9BVC3 393 aa13.34□□□□□ -0.27
COPA-202ENST00000368069 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP13.34□□□□□ -0.273e-7■□□□□ 10.4
COPA-202ENST00000368069 CRACR2BQ8N4Y2 399 aaPredicted RBP13.34□□□□□ -0.27
COPA-202ENST00000368069 TLR7Q9NYK1 1049 aaKnown RBP13.34□□□□□ -0.27
COPA-202ENST00000368069 MCM3P25205 808 aa13.34□□□□□ -0.27
COPA-202ENST00000368069 SPAG1Q07617 926 aa13.34□□□□□ -0.27
COPA-202ENST00000368069 RPGRQ92834 1020 aaKnown RBP13.34□□□□□ -0.27
COPA-202ENST00000368069 LRRC7Q96NW7 1537 aa13.34□□□□□ -0.27
COPA-202ENST00000368069 KIAA0754O94854 1291 aa13.34□□□□□ -0.27
COPA-202ENST00000368069 NBPF5PQ86XG9 351 aaPredicted RBP13.34□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 57.7 ms