RNA–Protein interactions for RNA: ENST00000360565.7

SCAF1-201, Transcript of SR-related CTD associated factor 1, humanhuman

APPRIS P2 TSL 2 BASIC

Gene SCAF1, Length 4,306 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF1-201ENST00000360565 C6orf229H3BNL8 230 aa18.74■□□□□ 0.59
SCAF1-201ENST00000360565 MBD4O95243 580 aa18.74■□□□□ 0.59
SCAF1-201ENST00000360565 HECW2Q9P2P5 1572 aa18.74■□□□□ 0.59
SCAF1-201ENST00000360565 KDRP35968 1356 aa18.74■□□□□ 0.59
SCAF1-201ENST00000360565 LDHCP07864 332 aa18.73■□□□□ 0.59
SCAF1-201ENST00000360565 JAKMIP3Q5VZ66 844 aa18.73■□□□□ 0.59
SCAF1-201ENST00000360565 TXLNBQ8N3L3 684 aa18.73■□□□□ 0.59
SCAF1-201ENST00000360565 DHX58Q96C10 678 aa18.73■□□□□ 0.59
SCAF1-201ENST00000360565 ZNF76P36508 570 aa18.73■□□□□ 0.59
SCAF1-201ENST00000360565 CCDC12Q8WUD4 166 aaPredicted RBP18.73■□□□□ 0.59
SCAF1-201ENST00000360565 PPP1R9BQ96SB3 815 aa18.73■□□□□ 0.59
SCAF1-201ENST00000360565 POLR3GO15318 223 aaPredicted RBP18.73■□□□□ 0.59
SCAF1-201ENST00000360565 BAG3O95817 575 aa18.73■□□□□ 0.59
SCAF1-201ENST00000360565 UBE2Q2Q8WVN8 375 aa18.73■□□□□ 0.59
SCAF1-201ENST00000360565 GOLGA6L9A6NEM1 432 aa18.73■□□□□ 0.59
SCAF1-201ENST00000360565 MTIF2P46199 727 aaKnown RBP18.73■□□□□ 0.59
SCAF1-201ENST00000360565 DNAJC10Q8IXB1 793 aa18.73■□□□□ 0.59
SCAF1-201ENST00000360565 RPGRQ92834 1020 aaKnown RBP18.73■□□□□ 0.59
SCAF1-201ENST00000360565 RNF17Q9BXT8 1623 aaKnown RBP18.72■□□□□ 0.59
SCAF1-201ENST00000360565 DDB1Q16531 1140 aa18.72■□□□□ 0.59
SCAF1-201ENST00000360565 CCDC96Q2M329 555 aa18.72■□□□□ 0.59
SCAF1-201ENST00000360565 CRACR2BQ8N4Y2 399 aaPredicted RBP18.72■□□□□ 0.59
SCAF1-201ENST00000360565 RAB34Q9BZG1 259 aa18.72■□□□□ 0.59
SCAF1-201ENST00000360565 CACNA2D4Q7Z3S7 1137 aa18.72■□□□□ 0.59
SCAF1-201ENST00000360565 RGS12O14924 1447 aa18.72■□□□□ 0.59
SCAF1-201ENST00000360565 PRAMEF22A3QJZ6 481 aa18.72■□□□□ 0.59
SCAF1-201ENST00000360565 PHKG2P15735 406 aa18.72■□□□□ 0.59
SCAF1-201ENST00000360565 BMP15O95972 392 aa18.71■□□□□ 0.59
SCAF1-201ENST00000360565 LIG1P18858 919 aa18.71■□□□□ 0.59
SCAF1-201ENST00000360565 NLRP3Q96P20 1036 aa18.71■□□□□ 0.59
SCAF1-201ENST00000360565 ANGEL1Q9UNK9 670 aaKnown RBP18.71■□□□□ 0.59
SCAF1-201ENST00000360565 SYCP1Q15431 976 aa18.71■□□□□ 0.59
SCAF1-201ENST00000360565 ENOX2Q16206 610 aaKnown RBP18.71■□□□□ 0.59
SCAF1-201ENST00000360565 ODF2Q5BJF6 829 aa18.71■□□□□ 0.59
SCAF1-201ENST00000360565 RRAGBQ5VZM2 374 aa18.71■□□□□ 0.59
SCAF1-201ENST00000360565 IQCEQ6IPM2 695 aa18.71■□□□□ 0.59
SCAF1-201ENST00000360565 MAGEB6P1A0A0J9YX57 407 aa18.71■□□□□ 0.59
SCAF1-201ENST00000360565 ZAP70P43403 619 aa18.71■□□□□ 0.59
SCAF1-201ENST00000360565 GBP3Q9H0R5 595 aa18.71■□□□□ 0.59
SCAF1-201ENST00000360565 PLEKHG1Q9ULL1 1385 aa18.71■□□□□ 0.59
SCAF1-201ENST00000360565 SPTY2D1Q68D10 685 aaPredicted RBP18.7■□□□□ 0.58
SCAF1-201ENST00000360565 GTF3C6Q969F1 213 aa18.7■□□□□ 0.58
SCAF1-201ENST00000360565 GNAT2P19087 354 aa18.7■□□□□ 0.58
SCAF1-201ENST00000360565 CUL4AQ13619 759 aa18.7■□□□□ 0.58
SCAF1-201ENST00000360565 TMEM266Q2M3C6 531 aa18.7■□□□□ 0.58
SCAF1-201ENST00000360565 TTLL7Q6ZT98 887 aa18.7■□□□□ 0.58
SCAF1-201ENST00000360565 SPHKAPQ2M3C7 1700 aa18.7■□□□□ 0.58
SCAF1-201ENST00000360565 E7EWF7 191 aa18.7■□□□□ 0.58
SCAF1-201ENST00000360565 STX17P56962 302 aa18.7■□□□□ 0.58
SCAF1-201ENST00000360565 ANO1Q5XXA6 986 aa18.7■□□□□ 0.58
SCAF1-201ENST00000360565 TLR7Q9NYK1 1049 aaKnown RBP18.7■□□□□ 0.58
SCAF1-201ENST00000360565 ARHGAP31Q2M1Z3 1444 aa18.7■□□□□ 0.58
SCAF1-201ENST00000360565 H0YHG0 523 aa18.7■□□□□ 0.58
SCAF1-201ENST00000360565 TTC6Q86TZ1 520 aa18.7■□□□□ 0.58
SCAF1-201ENST00000360565 BTG4Q9NY30 223 aa18.7■□□□□ 0.58
SCAF1-201ENST00000360565 ARAP3Q8WWN8 1544 aa18.69■□□□□ 0.58
SCAF1-201ENST00000360565 CRACR2AQ9BSW2 395 aa18.69■□□□□ 0.58
SCAF1-201ENST00000360565 ARHGEF25Q86VW2 580 aa18.69■□□□□ 0.58
SCAF1-201ENST00000360565 MAP4K1Q92918 833 aa18.69■□□□□ 0.58
SCAF1-201ENST00000360565 TRIM47Q96LD4 638 aa18.69■□□□□ 0.58
SCAF1-201ENST00000360565 PYM1Q9BRP8 204 aaKnown RBP18.69■□□□□ 0.58
SCAF1-201ENST00000360565 CENPHQ9H3R5 247 aa18.69■□□□□ 0.58
SCAF1-201ENST00000360565 KRI1Q8N9T8 703 aaKnown RBP18.68■□□□□ 0.58
SCAF1-201ENST00000360565 SETDB2Q96T68 719 aa18.68■□□□□ 0.58
SCAF1-201ENST00000360565 DNA2P51530 1060 aa18.68■□□□□ 0.58
SCAF1-201ENST00000360565 TDRD12Q587J7 1177 aaKnown RBP18.68■□□□□ 0.58
SCAF1-201ENST00000360565 SH3TC1Q8TE82 1336 aa18.68■□□□□ 0.58
SCAF1-201ENST00000360565 SLU7O95391 586 aaKnown RBP18.68■□□□□ 0.58
SCAF1-201ENST00000360565 CALML4Q96GE6 196 aa18.68■□□□□ 0.58
SCAF1-201ENST00000360565 SEPT11Q9NVA2 429 aaKnown RBP18.68■□□□□ 0.58
SCAF1-201ENST00000360565 PATL2C9JE40 543 aaKnown RBP18.68■□□□□ 0.58
SCAF1-201ENST00000360565 ZNF75DP51815 510 aa18.68■□□□□ 0.58
SCAF1-201ENST00000360565 MYL10Q9BUA6 226 aa18.68■□□□□ 0.58
SCAF1-201ENST00000360565 DBNLQ9UJU6 430 aaKnown RBP18.68■□□□□ 0.58
SCAF1-201ENST00000360565 DSCC1Q9BVC3 393 aa18.67■□□□□ 0.58
SCAF1-201ENST00000360565 ARMT1Q9H993 441 aa18.67■□□□□ 0.58
SCAF1-201ENST00000360565 COPRSQ9NQ92 184 aa18.67■□□□□ 0.58
SCAF1-201ENST00000360565 MYO6Q9UM54 1294 aa18.67■□□□□ 0.58
SCAF1-201ENST00000360565 PNPLA6Q8IY17 1366 aa18.67■□□□□ 0.58
SCAF1-201ENST00000360565 MYL5Q02045 173 aa18.67■□□□□ 0.58
SCAF1-201ENST00000360565 PHKBQ93100 1093 aa18.67■□□□□ 0.58
SCAF1-201ENST00000360565 TMEM87BQ96K49 555 aa18.67■□□□□ 0.58
SCAF1-201ENST00000360565 TSG101Q99816 390 aa18.67■□□□□ 0.58
SCAF1-201ENST00000360565 UBA5Q9GZZ9 404 aa18.67■□□□□ 0.58
SCAF1-201ENST00000360565 TSPY3P0CV98 308 aa18.67■□□□□ 0.58
SCAF1-201ENST00000360565 TSPY8P0CW00 308 aa18.67■□□□□ 0.58
SCAF1-201ENST00000360565 BMS1Q14692 1282 aaKnown RBP18.67■□□□□ 0.58
SCAF1-201ENST00000360565 STAT6P42226 847 aa18.66■□□□□ 0.58
SCAF1-201ENST00000360565 SLF2Q8IX21 1173 aa18.66■□□□□ 0.58
SCAF1-201ENST00000360565 TAF4BQ92750 862 aa18.66■□□□□ 0.58
SCAF1-201ENST00000360565 CABP5Q9NP86 173 aa18.66■□□□□ 0.58
SCAF1-201ENST00000360565 ZHX1Q9UKY1 873 aaPredicted RBP18.66■□□□□ 0.58
SCAF1-201ENST00000360565 ELP1O95163 1332 aa18.66■□□□□ 0.58
SCAF1-201ENST00000360565 TAF5LO75529 589 aa18.66■□□□□ 0.58
SCAF1-201ENST00000360565 AMPD3Q01432 767 aa18.66■□□□□ 0.58
SCAF1-201ENST00000360565 SYT10Q6XYQ8 523 aa18.66■□□□□ 0.58
SCAF1-201ENST00000360565 JAG2Q9Y219 1238 aa18.66■□□□□ 0.58
SCAF1-201ENST00000360565 CPSF1Q10570 1443 aaKnown RBP18.66■□□□□ 0.58
SCAF1-201ENST00000360565 E9PCH4 1651 aa18.66■□□□□ 0.58
SCAF1-201ENST00000360565 GOLGA6L10A6NI86 522 aa18.66■□□□□ 0.58
Retrieved 100 of 20,778 RNA–protein pairs in 28.9 ms