RNA–Protein interactions for RNA: ENST00000360001.10

SDF4-202, Transcript of stromal cell derived factor 4, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SDF4, Length 1,956 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDF4-202ENST00000360001 ZBTB22O15209 634 aa27.85■■■□□ 2.05
SDF4-202ENST00000360001 UFL1O94874 794 aa27.85■■■□□ 2.05
SDF4-202ENST00000360001 NECTIN1Q15223 517 aa27.85■■■□□ 2.05
SDF4-202ENST00000360001 STYK1Q6J9G0 422 aa27.85■■■□□ 2.05
SDF4-202ENST00000360001 SNX21Q969T3 373 aa27.85■■■□□ 2.05
SDF4-202ENST00000360001 WWC3Q9ULE0 1092 aa27.85■■■□□ 2.05
SDF4-202ENST00000360001 C10orf71Q711Q0 1435 aa27.85■■■□□ 2.05
SDF4-202ENST00000360001 WASHC4Q2M389 1173 aa27.84■■■□□ 2.05
SDF4-202ENST00000360001 ZNF622Q969S3 477 aaKnown RBP eCLIP27.84■■■□□ 2.053e-8■■■□□ 17.8
SDF4-202ENST00000360001 GPR101Q96P66 508 aaPredicted RBP27.84■■■□□ 2.05
SDF4-202ENST00000360001 CACNA1SQ13698 1873 aa27.84■■■□□ 2.05
SDF4-202ENST00000360001 PDE6AP16499 860 aa27.84■■■□□ 2.05
SDF4-202ENST00000360001 UBE3CQ15386 1083 aa27.84■■■□□ 2.05
SDF4-202ENST00000360001 TCRBV5S4A2TA0A5A2 114 aa27.83■■■□□ 2.05
SDF4-202ENST00000360001 RASEFQ8IZ41 740 aa27.83■■■□□ 2.05
SDF4-202ENST00000360001 TBC1D16Q8TBP0 767 aa27.83■■■□□ 2.05
SDF4-202ENST00000360001 KCNB2Q92953 911 aa27.83■■■□□ 2.05
SDF4-202ENST00000360001 POLLQ9UGP5 575 aa27.83■■■□□ 2.05
SDF4-202ENST00000360001 SNX14Q9Y5W7 946 aa27.83■■■□□ 2.05
SDF4-202ENST00000360001 PDS5AQ29RF7 1337 aaKnown RBP27.83■■■□□ 2.05
SDF4-202ENST00000360001 MAP3K12Q12852 859 aa27.82■■■□□ 2.04
SDF4-202ENST00000360001 PRPF40BQ6NWY9 871 aaKnown RBP27.82■■■□□ 2.04
SDF4-202ENST00000360001 PUS7LQ9H0K6 701 aaKnown RBP27.82■■■□□ 2.04
SDF4-202ENST00000360001 DAXXQ9UER7 740 aaPredicted RBP27.82■■■□□ 2.04
SDF4-202ENST00000360001 CD2BP2O95400 341 aaKnown RBP27.82■■■□□ 2.04
SDF4-202ENST00000360001 CHRNA5P30532 468 aa27.82■■■□□ 2.04
SDF4-202ENST00000360001 ZNF532Q9HCE3 1301 aa27.81■■■□□ 2.04
SDF4-202ENST00000360001 OLFM4Q6UX06 510 aa27.8■■■□□ 2.04
SDF4-202ENST00000360001 FRAT2O75474 233 aaPredicted RBP27.8■■■□□ 2.04
SDF4-202ENST00000360001 VPS53Q5VIR6 699 aa27.8■■■□□ 2.04
SDF4-202ENST00000360001 CREB3L3Q68CJ9 461 aa27.8■■■□□ 2.04
SDF4-202ENST00000360001 DUOX1Q9NRD9 1551 aa27.8■■■□□ 2.04
SDF4-202ENST00000360001 ZNF804AQ7Z570 1209 aa27.79■■■□□ 2.04
SDF4-202ENST00000360001 HSCBQ8IWL3 235 aa27.79■■■□□ 2.04
SDF4-202ENST00000360001 DSCC1Q9BVC3 393 aa27.79■■■□□ 2.04
SDF4-202ENST00000360001 LRP2BPQ9P2M1 347 aa27.79■■■□□ 2.04
SDF4-202ENST00000360001 SLX4Q8IY92 1834 aa27.79■■■□□ 2.04
SDF4-202ENST00000360001 HSPD1P10809 573 aaKnown RBP27.79■■■□□ 2.04
SDF4-202ENST00000360001 MAGEB6Q8N7X4 407 aa27.79■■■□□ 2.04
SDF4-202ENST00000360001 SLC27A2O14975 620 aa27.78■■■□□ 2.04
SDF4-202ENST00000360001 ZBTB7AO95365 584 aa27.78■■■□□ 2.04
SDF4-202ENST00000360001 TDRD7Q8NHU6 1098 aaKnown RBP27.78■■■□□ 2.04
SDF4-202ENST00000360001 ABCF2Q9UG63 623 aa27.78■■■□□ 2.04
SDF4-202ENST00000360001 U3KPZ7 1027 aaPredicted RBP27.78■■■□□ 2.04
SDF4-202ENST00000360001 C6orf229H3BNL8 230 aa27.77■■■□□ 2.04
SDF4-202ENST00000360001 GPAA1O43292 621 aa27.77■■■□□ 2.04
SDF4-202ENST00000360001 MPNDQ8N594 471 aa27.77■■■□□ 2.04
SDF4-202ENST00000360001 CNKSR1Q969H4 720 aa27.77■■■□□ 2.04
SDF4-202ENST00000360001 DLEC1Q9Y238 1755 aa27.76■■■□□ 2.03
SDF4-202ENST00000360001 KIF13BQ9NQT8 1826 aa27.76■■■□□ 2.03
SDF4-202ENST00000360001 FOXP2O15409 715 aa27.75■■■□□ 2.03
SDF4-202ENST00000360001 CHAF1AQ13111 956 aaPredicted RBP27.75■■■□□ 2.03
SDF4-202ENST00000360001 R3HDM1Q15032 1099 aaKnown RBP27.75■■■□□ 2.03
SDF4-202ENST00000360001 RNF20Q5VTR2 975 aa27.75■■■□□ 2.03
SDF4-202ENST00000360001 MTFR1LQ9H019 292 aa27.75■■■□□ 2.03
SDF4-202ENST00000360001 ST18O60284 1047 aa27.74■■■□□ 2.03
SDF4-202ENST00000360001 ZKSCAN1P17029 563 aaPredicted RBP27.74■■■□□ 2.03
SDF4-202ENST00000360001 NEK4P51957 841 aa27.74■■■□□ 2.03
SDF4-202ENST00000360001 DPP8Q6V1X1 898 aaPredicted RBP27.74■■■□□ 2.03
SDF4-202ENST00000360001 TMX4Q9H1E5 349 aaPredicted RBP27.74■■■□□ 2.03
SDF4-202ENST00000360001 CD209Q9NNX6 404 aa27.74■■■□□ 2.03
SDF4-202ENST00000360001 RAI14Q9P0K7 980 aa27.74■■■□□ 2.03
SDF4-202ENST00000360001 IL1R1P14778 569 aa27.73■■■□□ 2.03
SDF4-202ENST00000360001 UPF3BQ9BZI7 483 aaKnown RBP27.73■■■□□ 2.03
SDF4-202ENST00000360001 ATF5Q9Y2D1 282 aaPredicted RBP27.73■■■□□ 2.03
SDF4-202ENST00000360001 TAF6LQ9Y6J9 622 aa27.73■■■□□ 2.03
SDF4-202ENST00000360001 ADCK5Q3MIX3 580 aa27.72■■■□□ 2.03
SDF4-202ENST00000360001 TSGA10IPQ3SY00 556 aa27.72■■■□□ 2.03
SDF4-202ENST00000360001 C7orf43Q8WVR3 580 aa27.72■■■□□ 2.03
SDF4-202ENST00000360001 ZNF384Q8TF68 577 aa27.71■■■□□ 2.03
SDF4-202ENST00000360001 JAG2Q9Y219 1238 aa27.71■■■□□ 2.03
SDF4-202ENST00000360001 SALL1Q9NSC2 1324 aa27.71■■■□□ 2.03
SDF4-202ENST00000360001 K7ELQ4 463 aaPredicted RBP27.71■■■□□ 2.03
SDF4-202ENST00000360001 STRBPQ96SI9 672 aaKnown RBP27.71■■■□□ 2.03
SDF4-202ENST00000360001 TM6SF1Q9BZW5 370 aa27.71■■■□□ 2.03
SDF4-202ENST00000360001 CYP21A2P08686 494 aa27.7■■■□□ 2.03
SDF4-202ENST00000360001 ERICH6Q7L0X2 663 aa27.7■■■□□ 2.03
SDF4-202ENST00000360001 WDR66Q8TBY9 1149 aa27.7■■■□□ 2.03
SDF4-202ENST00000360001 AIDAQ96BJ3 306 aa27.7■■■□□ 2.03
SDF4-202ENST00000360001 RPAP1Q9BWH6 1393 aaPredicted RBP27.7■■■□□ 2.02
SDF4-202ENST00000360001 CYP7A1P22680 504 aa27.69■■■□□ 2.02
SDF4-202ENST00000360001 ADGRA1Q86SQ6 560 aa27.69■■■□□ 2.02
SDF4-202ENST00000360001 JAKMIP1Q96N16 626 aaKnown RBP27.69■■■□□ 2.02
SDF4-202ENST00000360001 MAST2Q6P0Q8 1798 aa27.69■■■□□ 2.02
SDF4-202ENST00000360001 MBD4O95243 580 aa27.69■■■□□ 2.02
SDF4-202ENST00000360001 IL27Q8NEV9 243 aa27.69■■■□□ 2.02
SDF4-202ENST00000360001 RIMBP2O15034 1052 aa27.68■■■□□ 2.02
SDF4-202ENST00000360001 CASTP20810 708 aaKnown RBP27.68■■■□□ 2.02
SDF4-202ENST00000360001 POLD1P28340 1107 aa27.68■■■□□ 2.02
SDF4-202ENST00000360001 PRDX5P30044 214 aa27.68■■■□□ 2.02
SDF4-202ENST00000360001 NSUN4Q96CB9 384 aaKnown RBP27.68■■■□□ 2.02
SDF4-202ENST00000360001 SNED1Q8TER0 1413 aa27.68■■■□□ 2.02
SDF4-202ENST00000360001 KCNA3P22001 575 aa27.68■■■□□ 2.02
SDF4-202ENST00000360001 ZGPATQ8N5A5 531 aaKnown RBP27.68■■■□□ 2.02
SDF4-202ENST00000360001 ZC3H12CQ9C0D7 883 aaKnown RBP27.68■■■□□ 2.02
SDF4-202ENST00000360001 ZSWIM6Q9HCJ5 1215 aa27.68■■■□□ 2.02
SDF4-202ENST00000360001 ZNF219Q9P2Y4 722 aaPredicted RBP27.68■■■□□ 2.02
SDF4-202ENST00000360001 CCDC88AQ3V6T2 1871 aa27.67■■■□□ 2.02
SDF4-202ENST00000360001 A0A0G2JLW4 131 aa27.67■■■□□ 2.02
SDF4-202ENST00000360001 DPEP1P16444 411 aa27.67■■■□□ 2.02
Retrieved 100 of 20,778 RNA–protein pairs in 71 ms