RNA–Protein interactions for RNA: ENST00000359867.7

CSNK1E-201, Transcript of casein kinase 1 epsilon, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CSNK1E, Length 2,642 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1E-201ENST00000359867 FAM227BQ96M60 508 aa16.55■□□□□ 0.24
CSNK1E-201ENST00000359867 GPR101Q96P66 508 aaPredicted RBP16.55■□□□□ 0.24
CSNK1E-201ENST00000359867 KCNA3P22001 575 aa16.55■□□□□ 0.24
CSNK1E-201ENST00000359867 GPSM2P81274 684 aa16.55■□□□□ 0.24
CSNK1E-201ENST00000359867 PTH1RQ03431 593 aa16.55■□□□□ 0.24
CSNK1E-201ENST00000359867 MAP4K1Q92918 833 aa16.55■□□□□ 0.24
CSNK1E-201ENST00000359867 PDCL3Q9H2J4 239 aa16.55■□□□□ 0.24
CSNK1E-201ENST00000359867 NDUFB9Q9Y6M9 179 aa16.55■□□□□ 0.24
CSNK1E-201ENST00000359867 NUCB2P80303 420 aa16.54■□□□□ 0.24
CSNK1E-201ENST00000359867 NECTIN1Q15223 517 aa16.54■□□□□ 0.24
CSNK1E-201ENST00000359867 GORABQ5T7V8 394 aa16.54■□□□□ 0.24
CSNK1E-201ENST00000359867 LPIN2Q92539 896 aa16.54■□□□□ 0.24
CSNK1E-201ENST00000359867 KIAA1551Q9HCM1 1747 aa16.54■□□□□ 0.24
CSNK1E-201ENST00000359867 MED23Q9ULK4 1368 aa16.54■□□□□ 0.24
CSNK1E-201ENST00000359867 KCNJ4P48050 445 aa16.54■□□□□ 0.24
CSNK1E-201ENST00000359867 CUL4AQ13619 759 aa16.54■□□□□ 0.24
CSNK1E-201ENST00000359867 TMX3Q96JJ7 454 aa16.54■□□□□ 0.24
CSNK1E-201ENST00000359867 TM6SF1Q9BZW5 370 aa16.54■□□□□ 0.24
CSNK1E-201ENST00000359867 ATP6V0A2Q9Y487 856 aa16.54■□□□□ 0.24
CSNK1E-201ENST00000359867 DLEC1Q9Y238 1755 aa16.54■□□□□ 0.24
CSNK1E-201ENST00000359867 A0A0D9SFI3 127 aa16.53■□□□□ 0.24
CSNK1E-201ENST00000359867 PDIA4P13667 645 aaKnown RBP16.53■□□□□ 0.24
CSNK1E-201ENST00000359867 SLC5A1P13866 664 aa16.53■□□□□ 0.24
CSNK1E-201ENST00000359867 KBTBD3Q8NAB2 608 aa16.53■□□□□ 0.24
CSNK1E-201ENST00000359867 ANKRD2Q9GZV1 360 aa16.53■□□□□ 0.24
CSNK1E-201ENST00000359867 LRRC37AA6NMS7 1700 aa16.53■□□□□ 0.24
CSNK1E-201ENST00000359867 RASEFQ8IZ41 740 aa16.53■□□□□ 0.24
CSNK1E-201ENST00000359867 CNKSR1Q969H4 720 aa16.53■□□□□ 0.24
CSNK1E-201ENST00000359867 INTS4Q96HW7 963 aaKnown RBP16.53■□□□□ 0.24
CSNK1E-201ENST00000359867 DNAJC2Q99543 621 aaKnown RBP16.53■□□□□ 0.24
CSNK1E-201ENST00000359867 XDHP47989 1333 aa16.53■□□□□ 0.24
CSNK1E-201ENST00000359867 ESPNB1AK53 854 aa16.52■□□□□ 0.24
CSNK1E-201ENST00000359867 IFIT1P09914 478 aaKnown RBP16.52■□□□□ 0.24
CSNK1E-201ENST00000359867 CLEC17AQ6ZS10 378 aa16.52■□□□□ 0.24
CSNK1E-201ENST00000359867 ZNF804BA4D1E1 1349 aa16.52■□□□□ 0.24
CSNK1E-201ENST00000359867 SOCS7O14512 581 aa16.52■□□□□ 0.23
CSNK1E-201ENST00000359867 ZKSCAN1P17029 563 aaPredicted RBP16.52■□□□□ 0.23
CSNK1E-201ENST00000359867 PHKA1P46020 1223 aa16.52■□□□□ 0.23
CSNK1E-201ENST00000359867 TXNRD3Q86VQ6 643 aa16.52■□□□□ 0.23
CSNK1E-201ENST00000359867 SP8Q8IXZ3 490 aa16.52■□□□□ 0.23
CSNK1E-201ENST00000359867 NLGN2Q8NFZ4 835 aa16.52■□□□□ 0.23
CSNK1E-201ENST00000359867 EDC3Q96F86 508 aaKnown RBP16.52■□□□□ 0.23
CSNK1E-201ENST00000359867 ARAP2Q8WZ64 1704 aa16.52■□□□□ 0.23
CSNK1E-201ENST00000359867 UFL1O94874 794 aa16.51■□□□□ 0.23
CSNK1E-201ENST00000359867 GYG1P46976 350 aa16.51■□□□□ 0.23
CSNK1E-201ENST00000359867 BCAMP50895 628 aa16.51■□□□□ 0.23
CSNK1E-201ENST00000359867 UBE4AQ14139 1066 aa16.51■□□□□ 0.23
CSNK1E-201ENST00000359867 CCDC158Q5M9N0 1113 aa16.51■□□□□ 0.23
CSNK1E-201ENST00000359867 TRIM44Q96DX7 344 aaPredicted RBP16.51■□□□□ 0.23
CSNK1E-201ENST00000359867 UPF3BQ9BZI7 483 aaKnown RBP16.51■□□□□ 0.23
CSNK1E-201ENST00000359867 PAG1Q9NWQ8 432 aa16.51■□□□□ 0.23
CSNK1E-201ENST00000359867 RBM8AQ9Y5S9 174 aaKnown RBP16.51■□□□□ 0.23
CSNK1E-201ENST00000359867 PTMSP20962 102 aa16.51■□□□□ 0.23
CSNK1E-201ENST00000359867 TGFB2P61812 414 aa16.51■□□□□ 0.23
CSNK1E-201ENST00000359867 SCARF1Q14162 830 aa16.51■□□□□ 0.23
CSNK1E-201ENST00000359867 CCDC102BQ68D86 513 aa16.51■□□□□ 0.23
CSNK1E-201ENST00000359867 PI16Q6UXB8 463 aa16.51■□□□□ 0.23
CSNK1E-201ENST00000359867 TTLL6Q8N841 843 aa16.51■□□□□ 0.23
CSNK1E-201ENST00000359867 TTC14Q96N46 770 aa16.51■□□□□ 0.23
CSNK1E-201ENST00000359867 IQSEC3Q9UPP2 1182 aaPredicted RBP16.51■□□□□ 0.23
CSNK1E-201ENST00000359867 C21orf2O43822 256 aa16.5■□□□□ 0.23
CSNK1E-201ENST00000359867 TTC39AQ5SRH9 613 aa16.5■□□□□ 0.23
CSNK1E-201ENST00000359867 RNF20Q5VTR2 975 aa16.5■□□□□ 0.23
CSNK1E-201ENST00000359867 TMC4Q7Z404 712 aa16.5■□□□□ 0.23
CSNK1E-201ENST00000359867 POLLQ9UGP5 575 aa16.5■□□□□ 0.23
CSNK1E-201ENST00000359867 CD2APQ9Y5K6 639 aa16.5■□□□□ 0.23
CSNK1E-201ENST00000359867 CREB3L3Q68CJ9 461 aa16.5■□□□□ 0.23
CSNK1E-201ENST00000359867 LTBP1Q14766 1721 aa16.5■□□□□ 0.23
CSNK1E-201ENST00000359867 MCMDC2Q4G0Z9 681 aa16.49■□□□□ 0.23
CSNK1E-201ENST00000359867 ZSWIM6Q9HCJ5 1215 aa16.49■□□□□ 0.23
CSNK1E-201ENST00000359867 HMG20BQ9P0W2 317 aa16.49■□□□□ 0.23
CSNK1E-201ENST00000359867 GGA1Q9UJY5 639 aa16.49■□□□□ 0.23
CSNK1E-201ENST00000359867 C6orf229H3BNL8 230 aa16.49■□□□□ 0.23
CSNK1E-201ENST00000359867 CYP2E1P05181 493 aaPredicted RBP16.49■□□□□ 0.23
CSNK1E-201ENST00000359867 NCLP19338 710 aaKnown RBP16.49■□□□□ 0.23
CSNK1E-201ENST00000359867 TBC1D16Q8TBP0 767 aa16.49■□□□□ 0.23
CSNK1E-201ENST00000359867 C7orf43Q8WVR3 580 aa16.49■□□□□ 0.23
CSNK1E-201ENST00000359867 HELLSQ9NRZ9 838 aa16.49■□□□□ 0.23
CSNK1E-201ENST00000359867 DDX49Q9Y6V7 483 aaKnown RBP16.49■□□□□ 0.23
CSNK1E-201ENST00000359867 DUOX1Q9NRD9 1551 aa16.49■□□□□ 0.23
CSNK1E-201ENST00000359867 SKOR2Q2VWA4 1001 aaPredicted RBP16.49■□□□□ 0.23
CSNK1E-201ENST00000359867 LRRFIP1Q32MZ4 808 aaKnown RBP16.49■□□□□ 0.23
CSNK1E-201ENST00000359867 TSGA10IPQ3SY00 556 aa16.49■□□□□ 0.23
CSNK1E-201ENST00000359867 MPNDQ8N594 471 aa16.49■□□□□ 0.23
CSNK1E-201ENST00000359867 ZGPATQ8N5A5 531 aaKnown RBP16.49■□□□□ 0.23
CSNK1E-201ENST00000359867 FHDC1Q9C0D6 1143 aaPredicted RBP16.49■□□□□ 0.23
CSNK1E-201ENST00000359867 PIM2Q9P1W9 311 aa16.49■□□□□ 0.23
CSNK1E-201ENST00000359867 LEMD3Q9Y2U8 911 aa16.49■□□□□ 0.23
CSNK1E-201ENST00000359867 GOLIM4O00461 696 aa16.48■□□□□ 0.23
CSNK1E-201ENST00000359867 SLC27A2O14975 620 aa16.48■□□□□ 0.23
CSNK1E-201ENST00000359867 BAG4O95429 457 aaKnown RBP16.48■□□□□ 0.23
CSNK1E-201ENST00000359867 PSMA5P28066 241 aa16.48■□□□□ 0.23
CSNK1E-201ENST00000359867 PKP1Q13835 747 aa16.48■□□□□ 0.23
CSNK1E-201ENST00000359867 VPS53Q5VIR6 699 aa16.48■□□□□ 0.23
CSNK1E-201ENST00000359867 DPP8Q6V1X1 898 aaPredicted RBP16.48■□□□□ 0.23
CSNK1E-201ENST00000359867 ZNF589Q86UQ0 364 aaPredicted RBP16.48■□□□□ 0.23
CSNK1E-201ENST00000359867 FAM84BQ96KN1 310 aaPredicted RBP16.48■□□□□ 0.23
CSNK1E-201ENST00000359867 TMX4Q9H1E5 349 aaPredicted RBP16.48■□□□□ 0.23
CSNK1E-201ENST00000359867 BRCA1P38398 1863 aaKnown RBP16.48■□□□□ 0.23
CSNK1E-201ENST00000359867 CASTP20810 708 aaKnown RBP16.48■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 35.2 ms