RNA–Protein interactions for RNA: ENST00000358544.6

VPS13B-203, Transcript of vacuolar protein sorting 13 homolog B, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene VPS13B, Length 14,094 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13B-203ENST00000358544 STAG1Q8WVM7 1258 aa6.85□□□□□ -1.31
VPS13B-203ENST00000358544 SDAD1Q9NVU7 687 aaKnown RBP eCLIP6.85□□□□□ -1.311e-6■■■■■ 33.1
VPS13B-203ENST00000358544 C8orf74Q6P047 294 aa6.85□□□□□ -1.31
VPS13B-203ENST00000358544 MRPL50Q8N5N7 158 aaKnown RBP6.85□□□□□ -1.31
VPS13B-203ENST00000358544 LMBR1Q8WVP7 490 aa6.85□□□□□ -1.31
VPS13B-203ENST00000358544 CFAP57Q96MR6 1250 aa6.85□□□□□ -1.31
VPS13B-203ENST00000358544 MIS18AQ9NYP9 233 aa6.85□□□□□ -1.31
VPS13B-203ENST00000358544 CTNND2Q9UQB3 1225 aa6.85□□□□□ -1.31
VPS13B-203ENST00000358544 SUPT6HQ7KZ85 1726 aaKnown RBP6.85□□□□□ -1.31
VPS13B-203ENST00000358544 NLRP12P59046 1061 aa6.85□□□□□ -1.31
VPS13B-203ENST00000358544 CYP26C1Q6V0L0 522 aa6.85□□□□□ -1.31
VPS13B-203ENST00000358544 LRRC2Q9BYS8 371 aa6.85□□□□□ -1.31
VPS13B-203ENST00000358544 ZSCAN20P17040 1043 aaPredicted RBP6.85□□□□□ -1.31
VPS13B-203ENST00000358544 MTMR3Q13615 1198 aa6.85□□□□□ -1.31
VPS13B-203ENST00000358544 CCDC42Q96M95 316 aa6.85□□□□□ -1.31
VPS13B-203ENST00000358544 SEPT14Q6ZU15 432 aa6.85□□□□□ -1.31
VPS13B-203ENST00000358544 KCNK9Q9NPC2 374 aa6.85□□□□□ -1.31
VPS13B-203ENST00000358544 KIAA0753Q2KHM9 967 aa6.85□□□□□ -1.31
VPS13B-203ENST00000358544 SERPINA10Q9UK55 444 aa6.85□□□□□ -1.31
VPS13B-203ENST00000358544 LRRD1A4D1F6 860 aa6.84□□□□□ -1.31
VPS13B-203ENST00000358544 RAD51AP2Q09MP3 1159 aa6.84□□□□□ -1.31
VPS13B-203ENST00000358544 GRIPAP1Q4V328 841 aa6.84□□□□□ -1.31
VPS13B-203ENST00000358544 PHLDB3Q6NSJ2 640 aa6.84□□□□□ -1.31
VPS13B-203ENST00000358544 UBLCP1Q8WVY7 318 aaPredicted RBP6.84□□□□□ -1.31
VPS13B-203ENST00000358544 FAM204AQ9H8W3 233 aa6.84□□□□□ -1.31
VPS13B-203ENST00000358544 PFDN1O60925 122 aa6.84□□□□□ -1.31
VPS13B-203ENST00000358544 LEO1Q8WVC0 666 aaPredicted RBP6.84□□□□□ -1.31
VPS13B-203ENST00000358544 XPO4Q9C0E2 1151 aaKnown RBP6.84□□□□□ -1.31
VPS13B-203ENST00000358544 VCX3BQ9H321 246 aa6.84□□□□□ -1.31
VPS13B-203ENST00000358544 LRRC23Q53EV4 343 aaPredicted RBP6.84□□□□□ -1.31
VPS13B-203ENST00000358544 Q6ZUG5 572 aa6.84□□□□□ -1.31
VPS13B-203ENST00000358544 ZNF530Q6P9A1 599 aaPredicted RBP6.84□□□□□ -1.31
VPS13B-203ENST00000358544 RASEFQ8IZ41 740 aa6.84□□□□□ -1.31
VPS13B-203ENST00000358544 JAKMIP2Q96AA8 810 aa6.84□□□□□ -1.31
VPS13B-203ENST00000358544 MTRF1LQ9UGC7 380 aaKnown RBP6.84□□□□□ -1.31
VPS13B-203ENST00000358544 RPRD2Q5VT52 1461 aaKnown RBP6.84□□□□□ -1.31
VPS13B-203ENST00000358544 HIP1RO75146 1068 aa6.84□□□□□ -1.31
VPS13B-203ENST00000358544 LARP1Q6PKG0 1096 aaKnown RBP6.84□□□□□ -1.31
VPS13B-203ENST00000358544 NOX5Q96PH1 765 aa6.84□□□□□ -1.31
VPS13B-203ENST00000358544 A0A087WZG4 1122 aa6.84□□□□□ -1.31
VPS13B-203ENST00000358544 IFT88Q13099 833 aa6.84□□□□□ -1.31
VPS13B-203ENST00000358544 CEP85Q6P2H3 762 aa6.84□□□□□ -1.31
VPS13B-203ENST00000358544 MCM10Q7L590 875 aa6.84□□□□□ -1.31
VPS13B-203ENST00000358544 EXOC1Q9NV70 894 aa6.84□□□□□ -1.31
VPS13B-203ENST00000358544 MUM1Q2TAK8 710 aa6.84□□□□□ -1.31
VPS13B-203ENST00000358544 KMT5BQ4FZB7 885 aa6.84□□□□□ -1.31
VPS13B-203ENST00000358544 SH3GL3Q99963 347 aa6.84□□□□□ -1.31
VPS13B-203ENST00000358544 SDK1Q7Z5N4 2213 aa6.84□□□□□ -1.31
VPS13B-203ENST00000358544 AHCTF1Q8WYP5 2266 aa6.84□□□□□ -1.31
VPS13B-203ENST00000358544 SPTY2D1Q68D10 685 aaPredicted RBP6.84□□□□□ -1.31
VPS13B-203ENST00000358544 RGS22Q8NE09 1264 aa6.84□□□□□ -1.31
VPS13B-203ENST00000358544 ATAD2BQ9ULI0 1458 aa6.84□□□□□ -1.31
VPS13B-203ENST00000358544 DESI2Q9BSY9 194 aa6.84□□□□□ -1.32
VPS13B-203ENST00000358544 DCTPP1Q9H773 170 aa6.84□□□□□ -1.32
VPS13B-203ENST00000358544 RPGRIP1Q96KN7 1286 aa6.84□□□□□ -1.32
VPS13B-203ENST00000358544 PPP1R13BQ96KQ4 1090 aa6.84□□□□□ -1.32
VPS13B-203ENST00000358544 ATP5DP30049 168 aa6.83□□□□□ -1.32
VPS13B-203ENST00000358544 PPP1R42Q7Z4L9 355 aa6.83□□□□□ -1.32
VPS13B-203ENST00000358544 USH1CQ9Y6N9 552 aa6.83□□□□□ -1.32
VPS13B-203ENST00000358544 AQRO60306 1485 aaKnown RBP eCLIP6.83□□□□□ -1.329e-7■■■■■ 29.7
VPS13B-203ENST00000358544 PIK3C2GO75747 1445 aa6.83□□□□□ -1.32
VPS13B-203ENST00000358544 POTEJP0CG39 1038 aa6.83□□□□□ -1.32
VPS13B-203ENST00000358544 MTX1Q13505 466 aa6.83□□□□□ -1.32
VPS13B-203ENST00000358544 CC2D1AQ6P1N0 951 aaPredicted RBP6.83□□□□□ -1.32
VPS13B-203ENST00000358544 SOGA3Q5TF21 947 aa6.83□□□□□ -1.32
VPS13B-203ENST00000358544 PDLIM2Q96JY6 352 aa6.83□□□□□ -1.32
VPS13B-203ENST00000358544 CXorf56Q9H5V9 222 aa6.83□□□□□ -1.32
VPS13B-203ENST00000358544 UNC13CQ8NB66 2214 aa6.83□□□□□ -1.32
VPS13B-203ENST00000358544 KRT13P13646 458 aa6.83□□□□□ -1.32
VPS13B-203ENST00000358544 ASIC1P78348 528 aa6.83□□□□□ -1.32
VPS13B-203ENST00000358544 E2F5Q15329 346 aa6.83□□□□□ -1.32
VPS13B-203ENST00000358544 GKAP1Q5VSY0 366 aaPredicted RBP6.83□□□□□ -1.32
VPS13B-203ENST00000358544 SMARCC2Q8TAQ2 1214 aa6.83□□□□□ -1.32
VPS13B-203ENST00000358544 CABP1Q9NZU7 370 aa6.83□□□□□ -1.32
VPS13B-203ENST00000358544 DESP17661 470 aa6.83□□□□□ -1.32
VPS13B-203ENST00000358544 CCDC62Q6P9F0 684 aa6.83□□□□□ -1.32
VPS13B-203ENST00000358544 TMTC1Q8IUR5 882 aa6.83□□□□□ -1.32
VPS13B-203ENST00000358544 RABGAP1Q9Y3P9 1069 aa6.83□□□□□ -1.32
VPS13B-203ENST00000358544 CUL9Q8IWT3 2517 aa6.83□□□□□ -1.32
VPS13B-203ENST00000358544 F6X3S4 739 aa6.83□□□□□ -1.32
VPS13B-203ENST00000358544 NUTM2GQ5VZR2 741 aa6.83□□□□□ -1.32
VPS13B-203ENST00000358544 CREB3L3Q68CJ9 461 aa6.83□□□□□ -1.32
VPS13B-203ENST00000358544 MORC2Q9Y6X9 1032 aaPredicted RBP6.83□□□□□ -1.32
VPS13B-203ENST00000358544 SYNRGQ9UMZ2 1314 aa6.83□□□□□ -1.32
VPS13B-203ENST00000358544 CACNA1FO60840 1977 aa6.83□□□□□ -1.32
VPS13B-203ENST00000358544 IRX1P78414 480 aaPredicted RBP6.83□□□□□ -1.32
VPS13B-203ENST00000358544 PLEKHO1Q53GL0 409 aaPredicted RBP6.83□□□□□ -1.32
VPS13B-203ENST00000358544 KRI1Q8N9T8 703 aaKnown RBP6.83□□□□□ -1.32
VPS13B-203ENST00000358544 PSMA7O14818 248 aa6.83□□□□□ -1.32
VPS13B-203ENST00000358544 CASQ2O14958 399 aaPredicted RBP6.83□□□□□ -1.32
VPS13B-203ENST00000358544 PPP1R14CQ8TAE6 165 aa6.83□□□□□ -1.32
VPS13B-203ENST00000358544 PHLPP2Q6ZVD8 1323 aa6.83□□□□□ -1.32
VPS13B-203ENST00000358544 ANKRD7Q92527 254 aa6.83□□□□□ -1.32
VPS13B-203ENST00000358544 SLC26A6Q9BXS9 759 aa6.83□□□□□ -1.32
VPS13B-203ENST00000358544 PRDM4Q9UKN5 801 aa6.83□□□□□ -1.32
VPS13B-203ENST00000358544 IKBKGQ9Y6K9 419 aa6.83□□□□□ -1.32
VPS13B-203ENST00000358544 CLTAP09496 248 aa6.83□□□□□ -1.32
VPS13B-203ENST00000358544 PRPHP41219 470 aa6.83□□□□□ -1.32
VPS13B-203ENST00000358544 AFMP43652 599 aa6.83□□□□□ -1.32
VPS13B-203ENST00000358544 IQCA1Q86XH1 822 aa6.83□□□□□ -1.32
Retrieved 100 of 20,778 RNA–protein pairs in 38.8 ms