RNA–Protein interactions for RNA: ENST00000357867.8

FN1-205, Transcript of fibronectin 1, humanhuman

TSL 1 (best) BASIC

Gene FN1, Length 7,898 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FN1-205ENST00000357867 POLKQ9UBT6 870 aa12.51□□□□□ -0.41
FN1-205ENST00000357867 KCNG4Q8TDN1 519 aa12.51□□□□□ -0.41
FN1-205ENST00000357867 FMNL3Q8IVF7 1028 aa12.5□□□□□ -0.41
FN1-205ENST00000357867 RGS22Q8NE09 1264 aa12.5□□□□□ -0.41
FN1-205ENST00000357867 DDX21Q9NR30 783 aaKnown RBP eCLIP12.5□□□□□ -0.41
FN1-205ENST00000357867 GBP3Q9H0R5 595 aa12.5□□□□□ -0.41
FN1-205ENST00000357867 AS3MTQ9HBK9 375 aa12.5□□□□□ -0.41
FN1-205ENST00000357867 CROCC2H7BZ55 1655 aa12.5□□□□□ -0.41
FN1-205ENST00000357867 MPNDQ8N594 471 aa12.5□□□□□ -0.41
FN1-205ENST00000357867 PSMD1Q99460 953 aa12.5□□□□□ -0.41
FN1-205ENST00000357867 BMP2KLQ5H9B9 411 aa12.5□□□□□ -0.41
FN1-205ENST00000357867 DDX19AQ9NUU7 478 aaKnown RBP12.5□□□□□ -0.41
FN1-205ENST00000357867 BCS1LQ9Y276 419 aa12.5□□□□□ -0.41
FN1-205ENST00000357867 ITGA6P23229 1130 aa12.5□□□□□ -0.41
FN1-205ENST00000357867 TTC22Q5TAA0 569 aa12.5□□□□□ -0.41
FN1-205ENST00000357867 HS2ST1Q7LGA3 356 aa12.5□□□□□ -0.41
FN1-205ENST00000357867 TRIM47Q96LD4 638 aa12.5□□□□□ -0.41
FN1-205ENST00000357867 ORAI2Q96SN7 254 aa12.5□□□□□ -0.41
FN1-205ENST00000357867 SLC52A2Q9HAB3 445 aa12.5□□□□□ -0.41
FN1-205ENST00000357867 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP12.5□□□□□ -0.41
FN1-205ENST00000357867 SMTNP53814 917 aa12.5□□□□□ -0.41
FN1-205ENST00000357867 EYA1Q99502 592 aa12.49□□□□□ -0.41
FN1-205ENST00000357867 ZBED4O75132 1171 aa12.49□□□□□ -0.41
FN1-205ENST00000357867 DLGAP5Q15398 846 aa12.49□□□□□ -0.41
FN1-205ENST00000357867 RRAGBQ5VZM2 374 aa12.49□□□□□ -0.41
FN1-205ENST00000357867 DCAF15Q66K64 600 aa12.49□□□□□ -0.41
FN1-205ENST00000357867 MIGA1Q8NAN2 632 aa12.49□□□□□ -0.41
FN1-205ENST00000357867 MROH5Q6ZUA9 1318 aa12.49□□□□□ -0.41
FN1-205ENST00000357867 CDC42BPGQ6DT37 1551 aa12.49□□□□□ -0.41
FN1-205ENST00000357867 SYKP43405 635 aa12.49□□□□□ -0.41
FN1-205ENST00000357867 SULF1Q8IWU6 871 aa12.49□□□□□ -0.41
FN1-205ENST00000357867 CTAGE1Q96RT6 745 aa12.49□□□□□ -0.41
FN1-205ENST00000357867 MAGI2Q86UL8 1455 aa12.49□□□□□ -0.41
FN1-205ENST00000357867 IKBKGQ9Y6K9 419 aa12.49□□□□□ -0.41
FN1-205ENST00000357867 ITSN1Q15811 1721 aa12.49□□□□□ -0.41
FN1-205ENST00000357867 MAP3K19Q56UN5 1328 aa12.49□□□□□ -0.41
FN1-205ENST00000357867 DTHD1Q6ZMT9 781 aa12.49□□□□□ -0.41
FN1-205ENST00000357867 USP48Q86UV5 1035 aa12.49□□□□□ -0.41
FN1-205ENST00000357867 INCENPQ9NQS7 918 aa12.49□□□□□ -0.41
FN1-205ENST00000357867 SAP30BPQ9UHR5 308 aaKnown RBP12.49□□□□□ -0.41
FN1-205ENST00000357867 TET3O43151 1660 aa12.49□□□□□ -0.41
FN1-205ENST00000357867 MAP2P11137 1827 aaKnown RBP12.49□□□□□ -0.41
FN1-205ENST00000357867 GAS8O95995 478 aa12.48□□□□□ -0.41
FN1-205ENST00000357867 PRPHP41219 470 aa12.48□□□□□ -0.41
FN1-205ENST00000357867 IFFO1Q0D2I5 559 aa12.48□□□□□ -0.41
FN1-205ENST00000357867 TAF3Q5VWG9 929 aa12.48□□□□□ -0.41
FN1-205ENST00000357867 HELBQ8NG08 1087 aaPredicted RBP12.48□□□□□ -0.41
FN1-205ENST00000357867 CRACR2AQ9BSW2 395 aa12.48□□□□□ -0.41
FN1-205ENST00000357867 HAUS2Q9NVX0 235 aa12.48□□□□□ -0.41
FN1-205ENST00000357867 JAG2Q9Y219 1238 aa12.48□□□□□ -0.41
FN1-205ENST00000357867 CAVIN2O95810 425 aa12.48□□□□□ -0.41
FN1-205ENST00000357867 METTL22Q9BUU2 404 aaPredicted RBP12.48□□□□□ -0.41
FN1-205ENST00000357867 CLTCQ00610 1675 aaKnown RBP12.48□□□□□ -0.41
FN1-205ENST00000357867 TMCO5BA8MYB1 307 aa12.48□□□□□ -0.41
FN1-205ENST00000357867 TNNT1P13805 278 aa12.48□□□□□ -0.41
FN1-205ENST00000357867 ATP8B2P98198 1209 aa12.48□□□□□ -0.41
FN1-205ENST00000357867 KRT79Q5XKE5 535 aa12.48□□□□□ -0.41
FN1-205ENST00000357867 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP12.48□□□□□ -0.414e-6■■■□□ 15.9
FN1-205ENST00000357867 RNF113AO15541 343 aaKnown RBP12.48□□□□□ -0.41
FN1-205ENST00000357867 TBC1D9Q6ZT07 1266 aa12.48□□□□□ -0.41
FN1-205ENST00000357867 IFT74Q96LB3 600 aa12.48□□□□□ -0.41
FN1-205ENST00000357867 GOLGA6L10A0A0M3HER8 536 aa12.48□□□□□ -0.41
FN1-205ENST00000357867 FAM193AP78312 1265 aa12.48□□□□□ -0.41
FN1-205ENST00000357867 SPOUT1Q5T280 376 aaKnown RBP12.48□□□□□ -0.41
FN1-205ENST00000357867 MEIS3Q99687 375 aa12.48□□□□□ -0.41
FN1-205ENST00000357867 ZBTB21Q9ULJ3 1066 aa12.48□□□□□ -0.41
FN1-205ENST00000357867 FAM89AQ96GI7 184 aa12.47□□□□□ -0.41
FN1-205ENST00000357867 FRMD4BQ9Y2L6 1034 aa12.47□□□□□ -0.41
FN1-205ENST00000357867 FERP16591 822 aa12.47□□□□□ -0.41
FN1-205ENST00000357867 MAP2K1Q02750 393 aaPredicted RBP12.47□□□□□ -0.41
FN1-205ENST00000357867 PRPF4BQ13523 1007 aaKnown RBP12.47□□□□□ -0.41
FN1-205ENST00000357867 DHX37Q8IY37 1157 aaKnown RBP12.47□□□□□ -0.41
FN1-205ENST00000357867 CNKSR1Q969H4 720 aa12.47□□□□□ -0.41
FN1-205ENST00000357867 CCDC113Q9H0I3 377 aa12.47□□□□□ -0.41
FN1-205ENST00000357867 FSD2A1L4K1 749 aa12.47□□□□□ -0.41
FN1-205ENST00000357867 PSMA7O14818 248 aa12.47□□□□□ -0.41
FN1-205ENST00000357867 ZBTB24O43167 697 aaPredicted RBP12.47□□□□□ -0.41
FN1-205ENST00000357867 HCLS1P14317 486 aaPredicted RBP12.47□□□□□ -0.41
FN1-205ENST00000357867 KMT5BQ4FZB7 885 aa12.47□□□□□ -0.41
FN1-205ENST00000357867 DISP1Q96F81 1524 aa12.47□□□□□ -0.41
FN1-205ENST00000357867 GSDMDP57764 484 aa12.46□□□□□ -0.41
FN1-205ENST00000357867 Q6ZUG5 572 aa12.46□□□□□ -0.41
FN1-205ENST00000357867 TMEM2Q9UHN6 1383 aa12.46□□□□□ -0.41
FN1-205ENST00000357867 DPH6Q7L8W6 267 aa12.46□□□□□ -0.41
FN1-205ENST00000357867 EHBP1Q8NDI1 1231 aa12.46□□□□□ -0.41
FN1-205ENST00000357867 TEKT1Q969V4 418 aa12.46□□□□□ -0.41
FN1-205ENST00000357867 SP4Q02446 784 aa12.46□□□□□ -0.41
FN1-205ENST00000357867 NUCB1Q02818 461 aa12.46□□□□□ -0.41
FN1-205ENST00000357867 CDC42BPBQ9Y5S2 1711 aa12.46□□□□□ -0.41
FN1-205ENST00000357867 ABCA8O94911 1581 aa12.46□□□□□ -0.41
FN1-205ENST00000357867 BICDL2A1A5D9 508 aa12.46□□□□□ -0.42
FN1-205ENST00000357867 PTPDC1A2A3K4 754 aa12.46□□□□□ -0.42
FN1-205ENST00000357867 DNM2P50570 870 aa12.46□□□□□ -0.42
FN1-205ENST00000357867 SNX16P57768 344 aa12.46□□□□□ -0.42
FN1-205ENST00000357867 GOLGA1Q92805 767 aa12.46□□□□□ -0.42
FN1-205ENST00000357867 RBM8AQ9Y5S9 174 aaKnown RBP12.46□□□□□ -0.42
FN1-205ENST00000357867 SYCE3A1L190 88 aa12.46□□□□□ -0.42
FN1-205ENST00000357867 HOXB7P09629 217 aa12.46□□□□□ -0.42
FN1-205ENST00000357867 SSFA2P28290 1259 aa12.46□□□□□ -0.42
FN1-205ENST00000357867 BBXQ8WY36 941 aaPredicted RBP12.46□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 45.5 ms