RNA–Protein interactions for RNA: ENST00000357475.8

SSBP3-202, Transcript of single stranded DNA binding protein 3, humanhuman

TSL 1 (best) BASIC

Gene SSBP3, Length 1,533 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP3-202ENST00000357475 VPS33BQ9H267 617 aa31■■■□□ 2.55
SSBP3-202ENST00000357475 G3V3G9 751 aa30.99■■■□□ 2.55
SSBP3-202ENST00000357475 DCAF8Q5TAQ9 597 aa30.99■■■□□ 2.55
SSBP3-202ENST00000357475 GNL3LQ9NVN8 582 aaKnown RBP30.99■■■□□ 2.55
SSBP3-202ENST00000357475 PSME4Q14997 1843 aa30.99■■■□□ 2.55
SSBP3-202ENST00000357475 ZAP70P43403 619 aa30.98■■■□□ 2.55
SSBP3-202ENST00000357475 DNAJC2Q99543 621 aaKnown RBP30.98■■■□□ 2.55
SSBP3-202ENST00000357475 AOX1Q06278 1338 aa30.98■■■□□ 2.55
SSBP3-202ENST00000357475 FRAT2O75474 233 aaPredicted RBP30.98■■■□□ 2.55
SSBP3-202ENST00000357475 GLRX3O76003 335 aaKnown RBP30.98■■■□□ 2.55
SSBP3-202ENST00000357475 GSPT1P15170 499 aaKnown RBP30.98■■■□□ 2.55
SSBP3-202ENST00000357475 CHAF1AQ13111 956 aaPredicted RBP30.98■■■□□ 2.55
SSBP3-202ENST00000357475 SPATA5Q8NB90 893 aa30.98■■■□□ 2.55
SSBP3-202ENST00000357475 TIAM2Q8IVF5 1701 aa30.97■■■□□ 2.55
SSBP3-202ENST00000357475 GRIN3BO60391 1043 aa30.97■■■□□ 2.55
SSBP3-202ENST00000357475 LMNB1P20700 586 aa30.97■■■□□ 2.55
SSBP3-202ENST00000357475 TTC22Q5TAA0 569 aa30.97■■■□□ 2.55
SSBP3-202ENST00000357475 NIM1KQ8IY84 436 aa30.97■■■□□ 2.55
SSBP3-202ENST00000357475 PPIL4Q8WUA2 492 aaKnown RBP eCLIP30.97■■■□□ 2.55
SSBP3-202ENST00000357475 HAUS7Q99871 368 aa30.97■■■□□ 2.55
SSBP3-202ENST00000357475 ANTXR1Q9H6X2 564 aa30.97■■■□□ 2.55
SSBP3-202ENST00000357475 ERC2O15083 957 aa30.96■■■□□ 2.55
SSBP3-202ENST00000357475 PODNQ7Z5L7 613 aa30.95■■■□□ 2.55
SSBP3-202ENST00000357475 GTF2IP78347 998 aa30.94■■■□□ 2.54
SSBP3-202ENST00000357475 TBC1D9Q6ZT07 1266 aa30.94■■■□□ 2.54
SSBP3-202ENST00000357475 MXD3Q9BW11 206 aa30.94■■■□□ 2.54
SSBP3-202ENST00000357475 DENND2AQ9ULE3 1009 aa30.94■■■□□ 2.54
SSBP3-202ENST00000357475 SEMA3EO15041 775 aa30.93■■■□□ 2.54
SSBP3-202ENST00000357475 CYP2E1P05181 493 aaPredicted RBP30.93■■■□□ 2.54
SSBP3-202ENST00000357475 FBXW7Q969H0 707 aa30.93■■■□□ 2.54
SSBP3-202ENST00000357475 RNF181Q9P0P0 153 aa30.93■■■□□ 2.54
SSBP3-202ENST00000357475 ZNRF3Q9ULT6 936 aa30.93■■■□□ 2.54
SSBP3-202ENST00000357475 AK9Q5TCS8 1911 aa30.93■■■□□ 2.54
SSBP3-202ENST00000357475 GOLIM4O00461 696 aa30.93■■■□□ 2.54
SSBP3-202ENST00000357475 JDP2Q8WYK2 163 aa30.93■■■□□ 2.54
SSBP3-202ENST00000357475 RAD17O75943 681 aa30.92■■■□□ 2.54
SSBP3-202ENST00000357475 C9orf131Q5VYM1 1079 aa30.92■■■□□ 2.54
SSBP3-202ENST00000357475 PIH1D3Q9NQM4 214 aaKnown RBP30.92■■■□□ 2.54
SSBP3-202ENST00000357475 DOCK2Q92608 1830 aa30.92■■■□□ 2.54
SSBP3-202ENST00000357475 ZBTB22O15209 634 aa30.91■■■□□ 2.54
SSBP3-202ENST00000357475 PAG1Q9NWQ8 432 aa30.91■■■□□ 2.54
SSBP3-202ENST00000357475 FAM205AQ6ZU69 1335 aa30.9■■■□□ 2.54
SSBP3-202ENST00000357475 GRIK5Q16478 980 aa30.9■■■□□ 2.54
SSBP3-202ENST00000357475 TTLL5Q6EMB2 1281 aa30.9■■■□□ 2.54
SSBP3-202ENST00000357475 PDS5AQ29RF7 1337 aaKnown RBP30.89■■■□□ 2.54
SSBP3-202ENST00000357475 FZD9O00144 591 aa30.88■■■□□ 2.53
SSBP3-202ENST00000357475 CXCL9Q07325 125 aa30.88■■■□□ 2.53
SSBP3-202ENST00000357475 CERS5Q8N5B7 392 aa30.88■■■□□ 2.53
SSBP3-202ENST00000357475 ZNF541Q9H0D2 1346 aa30.88■■■□□ 2.53
SSBP3-202ENST00000357475 TRIM6-TRIM34B2RNG4 842 aa30.88■■■□□ 2.53
SSBP3-202ENST00000357475 DACT2Q5SW24 774 aa30.88■■■□□ 2.53
SSBP3-202ENST00000357475 USP17L3A6NCW0 530 aa30.87■■■□□ 2.53
SSBP3-202ENST00000357475 USP17L4A6NCW7 530 aa30.87■■■□□ 2.53
SSBP3-202ENST00000357475 PSMD14O00487 310 aa30.87■■■□□ 2.53
SSBP3-202ENST00000357475 SDSP20132 328 aa30.87■■■□□ 2.53
SSBP3-202ENST00000357475 USP17L1Q7RTZ2 530 aa30.87■■■□□ 2.53
SSBP3-202ENST00000357475 MYH7P12883 1935 aa30.87■■■□□ 2.53
SSBP3-202ENST00000357475 CHGBP05060 677 aa30.86■■■□□ 2.53
SSBP3-202ENST00000357475 STRIP1Q5VSL9 837 aa30.86■■■□□ 2.53
SSBP3-202ENST00000357475 RILPL2Q969X0 211 aa30.86■■■□□ 2.53
SSBP3-202ENST00000357475 ABCF2Q9UG63 623 aa30.86■■■□□ 2.53
SSBP3-202ENST00000357475 MFSD14BQ5SR56 506 aa30.85■■■□□ 2.53
SSBP3-202ENST00000357475 WDR66Q8TBY9 1149 aa30.85■■■□□ 2.53
SSBP3-202ENST00000357475 PRDX5P30044 214 aa30.84■■■□□ 2.53
SSBP3-202ENST00000357475 BMP2KLQ5H9B9 411 aa30.84■■■□□ 2.53
SSBP3-202ENST00000357475 SALL1Q9NSC2 1324 aa30.84■■■□□ 2.53
SSBP3-202ENST00000357475 SLFNL1Q499Z3 407 aa30.83■■■□□ 2.53
SSBP3-202ENST00000357475 ZBTB12Q9Y330 459 aaPredicted RBP30.83■■■□□ 2.53
SSBP3-202ENST00000357475 ADAMTSL1Q8N6G6 1762 aa30.83■■■□□ 2.53
SSBP3-202ENST00000357475 CIAPIN1Q6FI81 312 aa30.83■■■□□ 2.53
SSBP3-202ENST00000357475 VIL1P09327 827 aaKnown RBP30.82■■■□□ 2.52
SSBP3-202ENST00000357475 EVI5LQ96CN4 794 aa30.82■■■□□ 2.52
SSBP3-202ENST00000357475 IDH1O75874 414 aaKnown RBP30.81■■■□□ 2.52
SSBP3-202ENST00000357475 CNTROBQ8N137 903 aa30.81■■■□□ 2.52
SSBP3-202ENST00000357475 KBTBD3Q8NAB2 608 aa30.81■■■□□ 2.52
SSBP3-202ENST00000357475 ZNF384Q8TF68 577 aa30.81■■■□□ 2.52
SSBP3-202ENST00000357475 MAST2Q6P0Q8 1798 aa30.81■■■□□ 2.52
SSBP3-202ENST00000357475 EIF6P56537 245 aaKnown RBP30.8■■■□□ 2.52
SSBP3-202ENST00000357475 RSBN1LQ6PCB5 846 aaPredicted RBP30.8■■■□□ 2.52
SSBP3-202ENST00000357475 FSD1Q9BTV5 496 aa30.8■■■□□ 2.52
SSBP3-202ENST00000357475 LRP2BPQ9P2M1 347 aa30.8■■■□□ 2.52
SSBP3-202ENST00000357475 F8W031 263 aaPredicted RBP30.79■■■□□ 2.52
SSBP3-202ENST00000357475 TTF1Q15361 905 aaPredicted RBP30.79■■■□□ 2.52
SSBP3-202ENST00000357475 TBC1D22AQ8WUA7 517 aa30.79■■■□□ 2.52
SSBP3-202ENST00000357475 GJA3Q9Y6H8 435 aa30.79■■■□□ 2.52
SSBP3-202ENST00000357475 DCAF8L1A6NGE4 600 aa30.78■■■□□ 2.52
SSBP3-202ENST00000357475 ERICH6Q7L0X2 663 aa30.78■■■□□ 2.52
SSBP3-202ENST00000357475 RAI14Q9P0K7 980 aa30.78■■■□□ 2.52
SSBP3-202ENST00000357475 LDHBP07195 334 aaKnown RBP30.77■■■□□ 2.52
SSBP3-202ENST00000357475 FKBP1AP62942 108 aaKnown RBP30.77■■■□□ 2.52
SSBP3-202ENST00000357475 KIAA0825Q8IV33 1275 aa30.77■■■□□ 2.52
SSBP3-202ENST00000357475 GMLQ99445 158 aa30.77■■■□□ 2.52
SSBP3-202ENST00000357475 MYH2Q9UKX2 1941 aa30.76■■■□□ 2.51
SSBP3-202ENST00000357475 MECOMQ03112 1051 aa30.76■■■□□ 2.51
SSBP3-202ENST00000357475 TNIP1Q15025 636 aa30.76■■■□□ 2.51
SSBP3-202ENST00000357475 ZGPATQ8N5A5 531 aaKnown RBP30.76■■■□□ 2.51
SSBP3-202ENST00000357475 SHTN1A0MZ66 631 aa30.75■■■□□ 2.51
SSBP3-202ENST00000357475 NSUN4Q96CB9 384 aaKnown RBP30.75■■■□□ 2.51
SSBP3-202ENST00000357475 DIXDC1Q155Q3 683 aa30.74■■■□□ 2.51
SSBP3-202ENST00000357475 MAGEB6Q8N7X4 407 aa30.74■■■□□ 2.51
Retrieved 100 of 20,778 RNA–protein pairs in 12.3 ms