RNA–Protein interactions for RNA: ENST00000355703.3

PCNX3-201, Transcript of pecanex 3, humanhuman

APPRIS P1 TSL 5 BASIC

Gene PCNX3, Length 7,105 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCNX3-201ENST00000355703 FAM193BQ96PV7 902 aaPredicted RBP17.85■□□□□ 0.45
PCNX3-201ENST00000355703 ZEB2O60315 1214 aa17.85■□□□□ 0.45
PCNX3-201ENST00000355703 TMEM57Q8N5G2 664 aa17.85■□□□□ 0.45
PCNX3-201ENST00000355703 MIGA1Q8NAN2 632 aa17.85■□□□□ 0.45
PCNX3-201ENST00000355703 INPP1P49441 399 aa17.85■□□□□ 0.45
PCNX3-201ENST00000355703 ZNF692Q9BU19 519 aaPredicted RBP17.85■□□□□ 0.45
PCNX3-201ENST00000355703 ORC3Q9UBD5 711 aaPredicted RBP17.84■□□□□ 0.45
PCNX3-201ENST00000355703 NIP7Q9Y221 180 aaKnown RBP eCLIP17.84■□□□□ 0.45
PCNX3-201ENST00000355703 BICDL2A1A5D9 508 aa17.84■□□□□ 0.45
PCNX3-201ENST00000355703 SYNDIG1LA6NDD5 238 aa17.84■□□□□ 0.45
PCNX3-201ENST00000355703 MX1P20591 662 aa17.84■□□□□ 0.45
PCNX3-201ENST00000355703 RSPH14Q9UHP6 348 aa17.84■□□□□ 0.45
PCNX3-201ENST00000355703 TXNDC9O14530 226 aa17.84■□□□□ 0.45
PCNX3-201ENST00000355703 SAT1P21673 171 aa17.84■□□□□ 0.45
PCNX3-201ENST00000355703 MARCKSP29966 332 aaPredicted RBP17.83■□□□□ 0.45
PCNX3-201ENST00000355703 SYNDIG1Q9H7V2 258 aa17.83■□□□□ 0.45
PCNX3-201ENST00000355703 METTL14Q9HCE5 456 aaKnown RBP17.83■□□□□ 0.45
PCNX3-201ENST00000355703 NAIPQ13075 1403 aa17.83■□□□□ 0.45
PCNX3-201ENST00000355703 GJB2P29033 226 aa17.83■□□□□ 0.44
PCNX3-201ENST00000355703 ANKS4BQ8N8V4 417 aa17.83■□□□□ 0.44
PCNX3-201ENST00000355703 RABGAP1Q9Y3P9 1069 aa17.83■□□□□ 0.44
PCNX3-201ENST00000355703 SYNJ2BP-COX16A0A087WUM0 186 aa17.83■□□□□ 0.44
PCNX3-201ENST00000355703 NAA16Q6N069 864 aaPredicted RBP17.83■□□□□ 0.44
PCNX3-201ENST00000355703 SPDYE1Q8NFV5 336 aaPredicted RBP17.83■□□□□ 0.44
PCNX3-201ENST00000355703 DHX58Q96C10 678 aa17.83■□□□□ 0.44
PCNX3-201ENST00000355703 RRP36Q96EU6 259 aaKnown RBP17.83■□□□□ 0.44
PCNX3-201ENST00000355703 COX16Q9P0S2 106 aa17.83■□□□□ 0.44
PCNX3-201ENST00000355703 ALDH3A1P30838 453 aa17.82■□□□□ 0.44
PCNX3-201ENST00000355703 MOSPD1Q9UJG1 213 aa17.82■□□□□ 0.44
PCNX3-201ENST00000355703 STRN3Q13033 797 aa17.82■□□□□ 0.44
PCNX3-201ENST00000355703 SNW1Q13573 536 aaKnown RBP17.82■□□□□ 0.44
PCNX3-201ENST00000355703 NFE2L2Q16236 605 aa17.82■□□□□ 0.44
PCNX3-201ENST00000355703 DNAAF4Q8WXU2 420 aa17.82■□□□□ 0.44
PCNX3-201ENST00000355703 PKNOX2Q96KN3 472 aa17.82■□□□□ 0.44
PCNX3-201ENST00000355703 NBPF3Q9H094 633 aa17.82■□□□□ 0.44
PCNX3-201ENST00000355703 USP25Q9UHP3 1055 aa17.82■□□□□ 0.44
PCNX3-201ENST00000355703 CASQ2O14958 399 aaPredicted RBP17.82■□□□□ 0.44
PCNX3-201ENST00000355703 CLUL1Q15846 466 aa17.82■□□□□ 0.44
PCNX3-201ENST00000355703 CCDC129Q6ZRS4 1044 aa17.82■□□□□ 0.44
PCNX3-201ENST00000355703 CCDC122Q5T0U0 273 aa17.82■□□□□ 0.44
PCNX3-201ENST00000355703 STK10O94804 968 aaKnown RBP17.82■□□□□ 0.44
PCNX3-201ENST00000355703 MCM6Q14566 821 aa17.82■□□□□ 0.44
PCNX3-201ENST00000355703 ZNF569Q5MCW4 686 aa17.82■□□□□ 0.44
PCNX3-201ENST00000355703 AFAP1Q8N556 730 aa17.82■□□□□ 0.44
PCNX3-201ENST00000355703 CPXCR1Q8N123 301 aa17.81■□□□□ 0.44
PCNX3-201ENST00000355703 ANKRD35Q8N283 1001 aa17.81■□□□□ 0.44
PCNX3-201ENST00000355703 STMN2Q93045 179 aa17.81■□□□□ 0.44
PCNX3-201ENST00000355703 UBE3BQ7Z3V4 1068 aa17.81■□□□□ 0.44
PCNX3-201ENST00000355703 IFNLR1Q8IU57 520 aaPredicted RBP17.81■□□□□ 0.44
PCNX3-201ENST00000355703 GLRX3O76003 335 aaKnown RBP17.81■□□□□ 0.44
PCNX3-201ENST00000355703 MVPQ14764 893 aaKnown RBP17.81■□□□□ 0.44
PCNX3-201ENST00000355703 Q3C1V9 767 aa17.81■□□□□ 0.44
PCNX3-201ENST00000355703 NXNQ6DKJ4 435 aa17.81■□□□□ 0.44
PCNX3-201ENST00000355703 RBBP5Q15291 538 aaKnown RBP17.81■□□□□ 0.44
PCNX3-201ENST00000355703 HP1BP3Q5SSJ5 553 aaPredicted RBP17.81■□□□□ 0.44
PCNX3-201ENST00000355703 IFT74Q96LB3 600 aa17.81■□□□□ 0.44
PCNX3-201ENST00000355703 CD2APQ9Y5K6 639 aa17.81■□□□□ 0.44
PCNX3-201ENST00000355703 ARID4AP29374 1257 aaPredicted RBP17.8■□□□□ 0.44
PCNX3-201ENST00000355703 ZNF131P52739 623 aa17.8■□□□□ 0.44
PCNX3-201ENST00000355703 KCNH5Q8NCM2 988 aa17.8■□□□□ 0.44
PCNX3-201ENST00000355703 RBM46Q8TBY0 533 aaKnown RBP17.8■□□□□ 0.44
PCNX3-201ENST00000355703 NLRP3Q96P20 1036 aa17.8■□□□□ 0.44
PCNX3-201ENST00000355703 SMIM24O75264 130 aa17.8■□□□□ 0.44
PCNX3-201ENST00000355703 CCDC183Q5T5S1 534 aa17.8■□□□□ 0.44
PCNX3-201ENST00000355703 SDAD1Q9NVU7 687 aaKnown RBP eCLIP17.8■□□□□ 0.444e-6■■■□□ 15.5
PCNX3-201ENST00000355703 PPP2R1AP30153 589 aa17.8■□□□□ 0.44
PCNX3-201ENST00000355703 STX17P56962 302 aa17.8■□□□□ 0.44
PCNX3-201ENST00000355703 USH1GQ495M9 461 aa17.8■□□□□ 0.44
PCNX3-201ENST00000355703 NCOA7Q8NI08 942 aa17.8■□□□□ 0.44
PCNX3-201ENST00000355703 MCM9Q9NXL9 1143 aa17.8■□□□□ 0.44
PCNX3-201ENST00000355703 PRPF6O94906 941 aaKnown RBP17.8■□□□□ 0.44
PCNX3-201ENST00000355703 ZNF513Q8N8E2 541 aaPredicted RBP17.8■□□□□ 0.44
PCNX3-201ENST00000355703 MAGED2Q9UNF1 606 aaPredicted RBP17.8■□□□□ 0.44
PCNX3-201ENST00000355703 MAGEB6P1A0A0J9YX57 407 aa17.79■□□□□ 0.44
PCNX3-201ENST00000355703 SLC12A1Q13621 1099 aa17.79■□□□□ 0.44
PCNX3-201ENST00000355703 KRT33BQ14525 404 aa17.79■□□□□ 0.44
PCNX3-201ENST00000355703 HELBQ8NG08 1087 aaPredicted RBP17.79■□□□□ 0.44
PCNX3-201ENST00000355703 NBPF7P0C2Y1 421 aaPredicted RBP17.79■□□□□ 0.44
PCNX3-201ENST00000355703 RPS6KA2Q15349 733 aa17.79■□□□□ 0.44
PCNX3-201ENST00000355703 ZNF467Q7Z7K2 595 aaPredicted RBP17.79■□□□□ 0.44
PCNX3-201ENST00000355703 ARHGAP5Q13017 1502 aa17.79■□□□□ 0.44
PCNX3-201ENST00000355703 ANXA1P04083 346 aa17.79■□□□□ 0.44
PCNX3-201ENST00000355703 BLVRAP53004 296 aa17.79■□□□□ 0.44
PCNX3-201ENST00000355703 NUCKS1Q9H1E3 243 aaKnown RBP17.79■□□□□ 0.44
PCNX3-201ENST00000355703 RAB3IPQ96QF0 476 aaPredicted RBP17.79■□□□□ 0.44
PCNX3-201ENST00000355703 HMGB1P09429 215 aaKnown RBP17.79■□□□□ 0.44
PCNX3-201ENST00000355703 UBASH3AP57075 661 aa17.79■□□□□ 0.44
PCNX3-201ENST00000355703 STIM2Q9P246 746 aa17.79■□□□□ 0.44
PCNX3-201ENST00000355703 XPAP23025 273 aaPredicted RBP17.78■□□□□ 0.44
PCNX3-201ENST00000355703 TCP10Q12799 353 aa17.78■□□□□ 0.44
PCNX3-201ENST00000355703 KRT28Q7Z3Y7 464 aa17.78■□□□□ 0.44
PCNX3-201ENST00000355703 CPLX4Q7Z7G2 160 aa17.78■□□□□ 0.44
PCNX3-201ENST00000355703 MICAL1Q8TDZ2 1067 aa17.78■□□□□ 0.44
PCNX3-201ENST00000355703 RMND1Q9NWS8 449 aa17.78■□□□□ 0.44
PCNX3-201ENST00000355703 CARD10Q9BWT7 1032 aa17.78■□□□□ 0.44
PCNX3-201ENST00000355703 ARPP19P56211 112 aa17.78■□□□□ 0.44
PCNX3-201ENST00000355703 RTN1Q16799 776 aa17.78■□□□□ 0.44
PCNX3-201ENST00000355703 MRPL46Q9H2W6 279 aaKnown RBP17.78■□□□□ 0.44
PCNX3-201ENST00000355703 ZNF644Q9H582 1327 aaPredicted RBP17.78■□□□□ 0.44
PCNX3-201ENST00000355703 RXRAP19793 462 aa17.78■□□□□ 0.44
Retrieved 100 of 20,778 RNA–protein pairs in 42.5 ms