RNA–Protein interactions for RNA: ENST00000349496.9

CTNNB1-201, Transcript of catenin beta 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CTNNB1, Length 3,737 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNNB1-201ENST00000349496 ACBD5Q5T8D3 534 aaPredicted RBP13.98□□□□□ -0.17
CTNNB1-201ENST00000349496 G2E3Q7L622 706 aa13.98□□□□□ -0.17
CTNNB1-201ENST00000349496 ZKSCAN4Q969J2 545 aaPredicted RBP13.98□□□□□ -0.17
CTNNB1-201ENST00000349496 GBP3Q9H0R5 595 aa13.98□□□□□ -0.17
CTNNB1-201ENST00000349496 H3BQF6 201 aa13.98□□□□□ -0.17
CTNNB1-201ENST00000349496 ZBTB7BO15156 539 aaPredicted RBP13.98□□□□□ -0.17
CTNNB1-201ENST00000349496 AP5Z1O43299 807 aa13.98□□□□□ -0.17
CTNNB1-201ENST00000349496 ARHGEF1Q92888 912 aaKnown RBP13.98□□□□□ -0.17
CTNNB1-201ENST00000349496 MCM8Q9UJA3 840 aa13.98□□□□□ -0.17
CTNNB1-201ENST00000349496 USP16Q9Y5T5 823 aa13.98□□□□□ -0.17
CTNNB1-201ENST00000349496 ZRANB2O95218 330 aaKnown RBP eCLIP13.97□□□□□ -0.172e-8■■■□□ 17.4
CTNNB1-201ENST00000349496 PPP2R3AQ06190 1150 aa13.97□□□□□ -0.17
CTNNB1-201ENST00000349496 SETDB1Q15047 1291 aa13.97□□□□□ -0.17
CTNNB1-201ENST00000349496 SLC30A9Q6PML9 568 aa13.97□□□□□ -0.17
CTNNB1-201ENST00000349496 ZDHHC9Q9Y397 364 aa13.97□□□□□ -0.17
CTNNB1-201ENST00000349496 SAMM50Q9Y512 469 aa13.97□□□□□ -0.17
CTNNB1-201ENST00000349496 CCDC61Q9Y6R9 512 aa13.97□□□□□ -0.17
CTNNB1-201ENST00000349496 ARHGEF28Q8N1W1 1705 aaKnown RBP13.97□□□□□ -0.17
CTNNB1-201ENST00000349496 MAGEA8P43361 318 aa13.97□□□□□ -0.17
CTNNB1-201ENST00000349496 DZIP1Q86YF9 867 aaKnown RBP13.97□□□□□ -0.17
CTNNB1-201ENST00000349496 LRRC8AQ8IWT6 810 aa13.97□□□□□ -0.17
CTNNB1-201ENST00000349496 RNF168Q8IYW5 571 aaPredicted RBP13.97□□□□□ -0.17
CTNNB1-201ENST00000349496 BCAS4Q8TDM0 211 aa13.97□□□□□ -0.17
CTNNB1-201ENST00000349496 TMX3Q96JJ7 454 aa13.97□□□□□ -0.17
CTNNB1-201ENST00000349496 ACEP12821 1306 aa13.97□□□□□ -0.17
CTNNB1-201ENST00000349496 APOBRQ0VD83 1088 aa13.97□□□□□ -0.17
CTNNB1-201ENST00000349496 EZH1Q92800 747 aaPredicted RBP13.97□□□□□ -0.17
CTNNB1-201ENST00000349496 KIAA1210Q9ULL0 1709 aa13.97□□□□□ -0.17
CTNNB1-201ENST00000349496 EXOC5O00471 708 aa13.96□□□□□ -0.17
CTNNB1-201ENST00000349496 SGSM2O43147 1006 aa13.96□□□□□ -0.17
CTNNB1-201ENST00000349496 MECOMQ03112 1051 aa13.96□□□□□ -0.17
CTNNB1-201ENST00000349496 DDX46Q7L014 1031 aaKnown RBP13.96□□□□□ -0.17
CTNNB1-201ENST00000349496 STK11IPQ8N1F8 1099 aa13.96□□□□□ -0.17
CTNNB1-201ENST00000349496 GOLGA6L7A0A1B0GV03 622 aa13.95□□□□□ -0.18
CTNNB1-201ENST00000349496 SMIM24O75264 130 aa13.95□□□□□ -0.18
CTNNB1-201ENST00000349496 CYP2E1P05181 493 aaPredicted RBP13.95□□□□□ -0.18
CTNNB1-201ENST00000349496 KCNV1Q6PIU1 500 aa13.95□□□□□ -0.18
CTNNB1-201ENST00000349496 DRAXINQ8NBI3 349 aaPredicted RBP13.95□□□□□ -0.18
CTNNB1-201ENST00000349496 ANKRD33BA6NCL7 494 aa13.95□□□□□ -0.18
CTNNB1-201ENST00000349496 ZNF189O75820 626 aaPredicted RBP13.95□□□□□ -0.18
CTNNB1-201ENST00000349496 PYGBP11216 843 aa13.95□□□□□ -0.18
CTNNB1-201ENST00000349496 TYRO3Q06418 890 aa13.95□□□□□ -0.18
CTNNB1-201ENST00000349496 GPR161Q8N6U8 529 aaKnown RBP13.95□□□□□ -0.18
CTNNB1-201ENST00000349496 MEIS3Q99687 375 aa13.95□□□□□ -0.18
CTNNB1-201ENST00000349496 SETBP1Q9Y6X0 1596 aa13.95□□□□□ -0.18
CTNNB1-201ENST00000349496 ATP2C2O75185 946 aa13.95□□□□□ -0.18
CTNNB1-201ENST00000349496 SFPQP23246 707 aaKnown RBP eCLIP13.95□□□□□ -0.184e-7■□□□□ 10.5
CTNNB1-201ENST00000349496 EFCAB8A8MWE9 144 aa13.94□□□□□ -0.18
CTNNB1-201ENST00000349496 GRIK3Q13003 919 aa13.94□□□□□ -0.18
CTNNB1-201ENST00000349496 SNCBQ16143 134 aa13.94□□□□□ -0.18
CTNNB1-201ENST00000349496 C16orf87Q6PH81 154 aa13.94□□□□□ -0.18
CTNNB1-201ENST00000349496 SPATA21Q7Z572 469 aa13.94□□□□□ -0.18
CTNNB1-201ENST00000349496 MIPOL1Q8TD10 442 aa13.94□□□□□ -0.18
CTNNB1-201ENST00000349496 ZC3H13Q5T200 1668 aaKnown RBP13.94□□□□□ -0.18
CTNNB1-201ENST00000349496 COL3A1P02461 1466 aaPredicted RBP13.94□□□□□ -0.18
CTNNB1-201ENST00000349496 TBC1D25Q3MII6 688 aa13.94□□□□□ -0.18
CTNNB1-201ENST00000349496 HOOK3Q86VS8 718 aa13.94□□□□□ -0.18
CTNNB1-201ENST00000349496 TBC1D31Q96DN5 1066 aa13.94□□□□□ -0.18
CTNNB1-201ENST00000349496 YIPF2Q9BWQ6 316 aa13.94□□□□□ -0.18
CTNNB1-201ENST00000349496 PARD6BQ9BYG5 372 aa13.94□□□□□ -0.18
CTNNB1-201ENST00000349496 AKAP2Q9Y2D5 859 aa13.94□□□□□ -0.18
CTNNB1-201ENST00000349496 ROBO2Q9HCK4 1378 aa13.94□□□□□ -0.18
CTNNB1-201ENST00000349496 ALKQ9UM73 1620 aa13.94□□□□□ -0.18
CTNNB1-201ENST00000349496 VPS37CA5D8V6 355 aaPredicted RBP13.94□□□□□ -0.18
CTNNB1-201ENST00000349496 NUCB1Q02818 461 aa13.94□□□□□ -0.18
CTNNB1-201ENST00000349496 ICA1Q05084 483 aa13.94□□□□□ -0.18
CTNNB1-201ENST00000349496 PRPF4BQ13523 1007 aaKnown RBP13.94□□□□□ -0.18
CTNNB1-201ENST00000349496 BMP2KLQ5H9B9 411 aa13.94□□□□□ -0.18
CTNNB1-201ENST00000349496 CPS1P31327 1500 aa13.94□□□□□ -0.18
CTNNB1-201ENST00000349496 FMNL1O95466 1100 aaPredicted RBP13.93□□□□□ -0.18
CTNNB1-201ENST00000349496 SLC4A2P04920 1241 aa13.93□□□□□ -0.18
CTNNB1-201ENST00000349496 SYCP3Q8IZU3 236 aa13.93□□□□□ -0.18
CTNNB1-201ENST00000349496 NGDNQ8NEJ9 315 aaKnown RBP13.93□□□□□ -0.18
CTNNB1-201ENST00000349496 LRRC7Q96NW7 1537 aa13.93□□□□□ -0.18
CTNNB1-201ENST00000349496 NDUFAB1O14561 156 aa13.93□□□□□ -0.18
CTNNB1-201ENST00000349496 BUB1BO60566 1050 aaPredicted RBP13.93□□□□□ -0.18
CTNNB1-201ENST00000349496 N4BP1O75113 896 aaKnown RBP13.93□□□□□ -0.18
CTNNB1-201ENST00000349496 MYBL1P10243 752 aa13.93□□□□□ -0.18
CTNNB1-201ENST00000349496 BICD2Q8TD16 824 aa13.93□□□□□ -0.18
CTNNB1-201ENST00000349496 LMCD1Q9NZU5 365 aa13.93□□□□□ -0.18
CTNNB1-201ENST00000349496 ARHGEF40Q8TER5 1519 aa13.93□□□□□ -0.18
CTNNB1-201ENST00000349496 PREPLQ4J6C6 727 aaPredicted RBP13.93□□□□□ -0.18
CTNNB1-201ENST00000349496 GOLGA1Q92805 767 aa13.93□□□□□ -0.18
CTNNB1-201ENST00000349496 TSC22D3Q99576 134 aa13.93□□□□□ -0.18
CTNNB1-201ENST00000349496 TSPYL2Q9H2G4 693 aaPredicted RBP13.93□□□□□ -0.18
CTNNB1-201ENST00000349496 CBX8Q9HC52 389 aa13.93□□□□□ -0.18
CTNNB1-201ENST00000349496 KLC4Q9NSK0 619 aa13.93□□□□□ -0.18
CTNNB1-201ENST00000349496 BLOC1S6Q9UL45 172 aa13.93□□□□□ -0.18
CTNNB1-201ENST00000349496 LRRFIP1Q32MZ4 808 aaKnown RBP13.92□□□□□ -0.18
CTNNB1-201ENST00000349496 CCDC144BQ3MJ40 725 aa13.92□□□□□ -0.18
CTNNB1-201ENST00000349496 LMOD2Q6P5Q4 547 aa13.92□□□□□ -0.18
CTNNB1-201ENST00000349496 CCDC144CPQ8IYA2 1237 aa13.92□□□□□ -0.18
CTNNB1-201ENST00000349496 LMBR1Q8WVP7 490 aa13.92□□□□□ -0.18
CTNNB1-201ENST00000349496 DNAJC25Q9H1X3 360 aa13.92□□□□□ -0.18
CTNNB1-201ENST00000349496 ATP6V1G1O75348 118 aa13.92□□□□□ -0.18
CTNNB1-201ENST00000349496 ANXA1P04083 346 aa13.92□□□□□ -0.18
CTNNB1-201ENST00000349496 SCNN1BP51168 640 aa13.92□□□□□ -0.18
CTNNB1-201ENST00000349496 GNG11P61952 73 aa13.92□□□□□ -0.18
CTNNB1-201ENST00000349496 INTS3Q68E01 1043 aaKnown RBP13.92□□□□□ -0.18
CTNNB1-201ENST00000349496 ZCWPW1Q9H0M4 648 aa13.92□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 27.9 ms