RNA–Protein interactions for RNA: ENST00000343200.9

VCAN-203, Transcript of versican, humanhuman

TSL 1 (best) BASIC

Gene VCAN, Length 9,455 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCAN-203ENST00000343200 MX2P20592 715 aa6.93□□□□□ -1.3
VCAN-203ENST00000343200 TMEM266Q2M3C6 531 aa6.93□□□□□ -1.3
VCAN-203ENST00000343200 ARHGAP30Q7Z6I6 1101 aaPredicted RBP6.93□□□□□ -1.3
VCAN-203ENST00000343200 FBXO41Q8TF61 875 aa6.93□□□□□ -1.3
VCAN-203ENST00000343200 C8orf76Q96K31 380 aa6.93□□□□□ -1.3
VCAN-203ENST00000343200 DUX4Q9UBX2 424 aa6.93□□□□□ -1.3
VCAN-203ENST00000343200 HECW1Q76N89 1606 aa6.93□□□□□ -1.3
VCAN-203ENST00000343200 BASP1P80723 227 aaKnown RBP6.92□□□□□ -1.3
VCAN-203ENST00000343200 ZSCAN16Q9H4T2 348 aaPredicted RBP6.92□□□□□ -1.3
VCAN-203ENST00000343200 PPP1R1BQ9UD71 204 aaPredicted RBP6.92□□□□□ -1.3
VCAN-203ENST00000343200 A0A087WZG4 1122 aa6.92□□□□□ -1.3
VCAN-203ENST00000343200 CLTAP09496 248 aa6.92□□□□□ -1.3
VCAN-203ENST00000343200 NUDCD3Q8IVD9 361 aa6.92□□□□□ -1.3
VCAN-203ENST00000343200 RPGRIP1Q96KN7 1286 aa6.92□□□□□ -1.3
VCAN-203ENST00000343200 MYO1BO43795 1136 aa6.92□□□□□ -1.3
VCAN-203ENST00000343200 ZSCAN25Q6NSZ9 544 aa6.92□□□□□ -1.3
VCAN-203ENST00000343200 MSANTD4Q8NCY6 345 aa6.92□□□□□ -1.3
VCAN-203ENST00000343200 EID1Q9Y6B2 187 aa6.92□□□□□ -1.3
VCAN-203ENST00000343200 CC2D2AQ9P2K1 1620 aa6.92□□□□□ -1.3
VCAN-203ENST00000343200 AKR1B10O60218 316 aa6.92□□□□□ -1.3
VCAN-203ENST00000343200 ELF2Q15723 593 aa6.92□□□□□ -1.3
VCAN-203ENST00000343200 PPP4R3AQ6IN85 833 aa6.92□□□□□ -1.3
VCAN-203ENST00000343200 FSIP1Q8NA03 581 aa6.92□□□□□ -1.3
VCAN-203ENST00000343200 SAAL1Q96ER3 474 aa6.92□□□□□ -1.3
VCAN-203ENST00000343200 GDAP1L1Q96MZ0 367 aa6.92□□□□□ -1.3
VCAN-203ENST00000343200 STK26Q9P289 416 aa6.92□□□□□ -1.3
VCAN-203ENST00000343200 COPG1Q9Y678 874 aaKnown RBP6.92□□□□□ -1.3
VCAN-203ENST00000343200 CHD3Q12873 2000 aaKnown RBP6.92□□□□□ -1.3
VCAN-203ENST00000343200 APAF1O14727 1248 aa6.92□□□□□ -1.3
VCAN-203ENST00000343200 CRCPO75575 148 aa6.92□□□□□ -1.3
VCAN-203ENST00000343200 PPIL4Q8WUA2 492 aaKnown RBP eCLIP6.92□□□□□ -1.3
VCAN-203ENST00000343200 CHCHD3Q9NX63 227 aaKnown RBP6.92□□□□□ -1.3
VCAN-203ENST00000343200 PPFIA4O75335 1185 aa6.92□□□□□ -1.3
VCAN-203ENST00000343200 NBPF7P0C2Y1 421 aaPredicted RBP6.92□□□□□ -1.3
VCAN-203ENST00000343200 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP6.92□□□□□ -1.3
VCAN-203ENST00000343200 CCDC89Q8N998 374 aa6.92□□□□□ -1.3
VCAN-203ENST00000343200 FAM71BQ8TC56 605 aa6.92□□□□□ -1.3
VCAN-203ENST00000343200 TBC1D2Q9BYX2 928 aa6.92□□□□□ -1.3
VCAN-203ENST00000343200 DYTNA2CJ06 578 aa6.91□□□□□ -1.3
VCAN-203ENST00000343200 SH2D4AQ9H788 454 aa6.91□□□□□ -1.3
VCAN-203ENST00000343200 DOCK11Q5JSL3 2073 aa6.91□□□□□ -1.3
VCAN-203ENST00000343200 FAM186BQ8IYM0 893 aa6.91□□□□□ -1.3
VCAN-203ENST00000343200 PANK2Q9BZ23 570 aa6.91□□□□□ -1.3
VCAN-203ENST00000343200 MYO5CQ9NQX4 1742 aa6.91□□□□□ -1.3
VCAN-203ENST00000343200 HNRNPCP07910 306 aaKnown RBP eCLIP6.91□□□□□ -1.3
VCAN-203ENST00000343200 MAP7D3Q8IWC1 876 aa6.91□□□□□ -1.3
VCAN-203ENST00000343200 CCDC124Q96CT7 223 aaKnown RBP6.91□□□□□ -1.3
VCAN-203ENST00000343200 PFDN4Q9NQP4 134 aa6.91□□□□□ -1.3
VCAN-203ENST00000343200 KLHL14Q9P2G3 628 aa6.91□□□□□ -1.3
VCAN-203ENST00000343200 CUX2O14529 1486 aa6.91□□□□□ -1.3
VCAN-203ENST00000343200 KRT75O95678 551 aa6.91□□□□□ -1.3
VCAN-203ENST00000343200 GAS8O95995 478 aa6.91□□□□□ -1.3
VCAN-203ENST00000343200 SKIP12755 728 aa6.91□□□□□ -1.3
VCAN-203ENST00000343200 C8orf74Q6P047 294 aa6.91□□□□□ -1.3
VCAN-203ENST00000343200 VSIG1Q86XK7 387 aa6.91□□□□□ -1.3
VCAN-203ENST00000343200 MPHOSPH6Q99547 160 aaKnown RBP6.91□□□□□ -1.3
VCAN-203ENST00000343200 CSRNP2Q9H175 543 aa6.91□□□□□ -1.3
VCAN-203ENST00000343200 LONP1P36776 959 aaKnown RBP6.91□□□□□ -1.3
VCAN-203ENST00000343200 MMS22LQ6ZRQ5 1243 aa6.91□□□□□ -1.3
VCAN-203ENST00000343200 NME8Q8N427 588 aa6.91□□□□□ -1.3
VCAN-203ENST00000343200 ARMC2Q8NEN0 867 aa6.91□□□□□ -1.3
VCAN-203ENST00000343200 MIS12Q9H081 205 aa6.91□□□□□ -1.3
VCAN-203ENST00000343200 SYNCQ9H7C4 482 aa6.91□□□□□ -1.3
VCAN-203ENST00000343200 GOLGA8AA7E2F4 631 aa6.91□□□□□ -1.3
VCAN-203ENST00000343200 GOLGA8BA8MQT2 603 aa6.91□□□□□ -1.3
VCAN-203ENST00000343200 N4BP3O15049 544 aa6.91□□□□□ -1.3
VCAN-203ENST00000343200 WDHD1O75717 1129 aaPredicted RBP6.91□□□□□ -1.3
VCAN-203ENST00000343200 STXBP4Q6ZWJ1 553 aa6.91□□□□□ -1.3
VCAN-203ENST00000343200 CCDC25Q86WR0 208 aa6.91□□□□□ -1.3
VCAN-203ENST00000343200 EXOC1Q9NV70 894 aa6.91□□□□□ -1.3
VCAN-203ENST00000343200 TSC22D4Q9Y3Q8 395 aa6.91□□□□□ -1.3
VCAN-203ENST00000343200 RTTNQ86VV8 2226 aa6.91□□□□□ -1.3
VCAN-203ENST00000343200 NBPF9Q3BBW0 867 aa6.91□□□□□ -1.3
VCAN-203ENST00000343200 SRGAP1Q7Z6B7 1085 aa6.91□□□□□ -1.3
VCAN-203ENST00000343200 L3MBTL2Q969R5 705 aa6.91□□□□□ -1.3
VCAN-203ENST00000343200 HMGB3O15347 200 aaKnown RBP6.9□□□□□ -1.3
VCAN-203ENST00000343200 ZRANB2O95218 330 aaKnown RBP eCLIP6.9□□□□□ -1.3
VCAN-203ENST00000343200 KRT10P13645 584 aa6.9□□□□□ -1.3
VCAN-203ENST00000343200 SPAG1Q07617 926 aa6.9□□□□□ -1.3
VCAN-203ENST00000343200 PPP4R1Q8TF05 950 aa6.9□□□□□ -1.3
VCAN-203ENST00000343200 TXLNGQ9NUQ3 528 aa6.9□□□□□ -1.3
VCAN-203ENST00000343200 ST20-MTHFSA0A0A6YYL1 179 aa6.9□□□□□ -1.3
VCAN-203ENST00000343200 RILPL1Q5EBL4 403 aa6.9□□□□□ -1.3
VCAN-203ENST00000343200 ST13P4Q8IZP2 240 aaPredicted RBP6.9□□□□□ -1.3
VCAN-203ENST00000343200 KLHL34Q8N239 644 aa6.9□□□□□ -1.3
VCAN-203ENST00000343200 LMNB1P20700 586 aa6.9□□□□□ -1.3
VCAN-203ENST00000343200 PHBP35232 272 aa6.9□□□□□ -1.3
VCAN-203ENST00000343200 BRD3Q15059 726 aa6.9□□□□□ -1.3
VCAN-203ENST00000343200 KCNG4Q8TDN1 519 aa6.9□□□□□ -1.3
VCAN-203ENST00000343200 CAPS2Q9BXY5 557 aa6.9□□□□□ -1.3
VCAN-203ENST00000343200 EEF1DP29692 281 aaKnown RBP6.9□□□□□ -1.3
VCAN-203ENST00000343200 GEN1Q17RS7 908 aa6.9□□□□□ -1.3
VCAN-203ENST00000343200 UBL4BQ8N7F7 174 aa6.9□□□□□ -1.3
VCAN-203ENST00000343200 ZNF280CQ8ND82 737 aa6.9□□□□□ -1.3
VCAN-203ENST00000343200 PEG3Q9GZU2 1588 aa6.9□□□□□ -1.3
VCAN-203ENST00000343200 PDZD8Q8NEN9 1154 aa6.9□□□□□ -1.3
VCAN-203ENST00000343200 CABIN1Q9Y6J0 2220 aa6.9□□□□□ -1.31
VCAN-203ENST00000343200 MCTP2Q6DN12 878 aa6.9□□□□□ -1.31
VCAN-203ENST00000343200 CWC27Q6UX04 472 aaKnown RBP6.9□□□□□ -1.31
VCAN-203ENST00000343200 IQCA1Q86XH1 822 aa6.9□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 10.5 ms