RNA–Protein interactions for RNA: ENST00000340477.9

SYNE4-202, Transcript of spectrin repeat containing nuclear envelope family member 4, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SYNE4, Length 1,004 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE4-202ENST00000340477 MYOZ2Q9NPC6 264 aa23.74■■□□□ 1.39
SYNE4-202ENST00000340477 KIAA0825Q8IV33 1275 aa23.73■■□□□ 1.39
SYNE4-202ENST00000340477 FAM205AQ6ZU69 1335 aa23.73■■□□□ 1.39
SYNE4-202ENST00000340477 HIRAP54198 1017 aaPredicted RBP23.72■■□□□ 1.39
SYNE4-202ENST00000340477 TFCP2Q12800 502 aa23.72■■□□□ 1.39
SYNE4-202ENST00000340477 CEP85Q6P2H3 762 aa23.72■■□□□ 1.39
SYNE4-202ENST00000340477 TBC1D22AQ8WUA7 517 aa23.72■■□□□ 1.39
SYNE4-202ENST00000340477 DCPSQ96C86 337 aaKnown RBP23.72■■□□□ 1.39
SYNE4-202ENST00000340477 JAG2Q9Y219 1238 aa23.72■■□□□ 1.39
SYNE4-202ENST00000340477 PASKQ96RG2 1323 aa23.71■■□□□ 1.39
SYNE4-202ENST00000340477 HMMRO75330 724 aa23.71■■□□□ 1.39
SYNE4-202ENST00000340477 SURF6O75683 361 aaKnown RBP23.71■■□□□ 1.39
SYNE4-202ENST00000340477 BCAMP50895 628 aa23.71■■□□□ 1.39
SYNE4-202ENST00000340477 CHAF1AQ13111 956 aaPredicted RBP23.71■■□□□ 1.39
SYNE4-202ENST00000340477 MFSD14BQ5SR56 506 aa23.71■■□□□ 1.39
SYNE4-202ENST00000340477 IQSEC3Q9UPP2 1182 aaPredicted RBP23.71■■□□□ 1.39
SYNE4-202ENST00000340477 TRPM7Q96QT4 1865 aa23.7■■□□□ 1.39
SYNE4-202ENST00000340477 ITGBL1O95965 494 aaPredicted RBP23.7■■□□□ 1.38
SYNE4-202ENST00000340477 C20orf194Q5TEA3 1177 aa23.7■■□□□ 1.38
SYNE4-202ENST00000340477 CDC37L1Q7L3B6 337 aa23.7■■□□□ 1.38
SYNE4-202ENST00000340477 PGAP2Q9UHJ9 254 aa23.7■■□□□ 1.38
SYNE4-202ENST00000340477 EGFRP00533 1210 aa23.69■■□□□ 1.38
SYNE4-202ENST00000340477 RRP1P56182 461 aaKnown RBP23.69■■□□□ 1.38
SYNE4-202ENST00000340477 RPAP2Q8IXW5 612 aaPredicted RBP23.69■■□□□ 1.38
SYNE4-202ENST00000340477 ZBTB40Q9NUA8 1239 aa23.69■■□□□ 1.38
SYNE4-202ENST00000340477 GGA3Q9NZ52 723 aa23.69■■□□□ 1.38
SYNE4-202ENST00000340477 A0A1B0GUL7 405 aa23.68■■□□□ 1.38
SYNE4-202ENST00000340477 F8W031 263 aaPredicted RBP23.68■■□□□ 1.38
SYNE4-202ENST00000340477 GORABQ5T7V8 394 aa23.68■■□□□ 1.38
SYNE4-202ENST00000340477 SULF1Q8IWU6 871 aa23.68■■□□□ 1.38
SYNE4-202ENST00000340477 CERS5Q8N5B7 392 aa23.68■■□□□ 1.38
SYNE4-202ENST00000340477 NEUROD6Q96NK8 337 aa23.68■■□□□ 1.38
SYNE4-202ENST00000340477 CREBZFQ9NS37 354 aa23.68■■□□□ 1.38
SYNE4-202ENST00000340477 TMEM88BA6NKF7 163 aa23.67■■□□□ 1.38
SYNE4-202ENST00000340477 SCARF1Q14162 830 aa23.67■■□□□ 1.38
SYNE4-202ENST00000340477 HSP90AB4PQ58FF6 505 aa23.67■■□□□ 1.38
SYNE4-202ENST00000340477 KRT26Q7Z3Y9 468 aa23.67■■□□□ 1.38
SYNE4-202ENST00000340477 ERC1Q8IUD2 1116 aa23.67■■□□□ 1.38
SYNE4-202ENST00000340477 SEMA3EO15041 775 aa23.66■■□□□ 1.38
SYNE4-202ENST00000340477 DLGAP5Q15398 846 aa23.66■■□□□ 1.38
SYNE4-202ENST00000340477 WDR66Q8TBY9 1149 aa23.66■■□□□ 1.38
SYNE4-202ENST00000340477 GLIS2Q9BZE0 524 aaPredicted RBP23.66■■□□□ 1.38
SYNE4-202ENST00000340477 ECM29Q5VYK3 1845 aa23.66■■□□□ 1.38
SYNE4-202ENST00000340477 POLR2AP24928 1970 aaKnown RBP23.65■■□□□ 1.38
SYNE4-202ENST00000340477 MAST3O60307 1309 aa23.65■■□□□ 1.38
SYNE4-202ENST00000340477 PITPNM2Q9BZ72 1349 aa23.65■■□□□ 1.38
SYNE4-202ENST00000340477 MYO1BO43795 1136 aa23.65■■□□□ 1.38
SYNE4-202ENST00000340477 RBM5P52756 815 aaKnown RBP eCLIP23.65■■□□□ 1.38
SYNE4-202ENST00000340477 ANGEL2Q5VTE6 544 aaKnown RBP23.65■■□□□ 1.38
SYNE4-202ENST00000340477 XAGE2Q96GT9 111 aa23.65■■□□□ 1.38
SYNE4-202ENST00000340477 DENND2AQ9ULE3 1009 aa23.65■■□□□ 1.38
SYNE4-202ENST00000340477 TTF2Q9UNY4 1162 aaKnown RBP23.65■■□□□ 1.38
SYNE4-202ENST00000340477 NOP58Q9Y2X3 529 aaKnown RBP23.65■■□□□ 1.38
SYNE4-202ENST00000340477 ADORA1P30542 326 aa23.64■■□□□ 1.37
SYNE4-202ENST00000340477 TIMM10P62072 90 aa23.64■■□□□ 1.37
SYNE4-202ENST00000340477 USP48Q86UV5 1035 aa23.64■■□□□ 1.37
SYNE4-202ENST00000340477 GPR108Q9NPR9 543 aa23.64■■□□□ 1.37
SYNE4-202ENST00000340477 TRAF5O00463 557 aa23.63■■□□□ 1.37
SYNE4-202ENST00000340477 WNT10BO00744 389 aa23.63■■□□□ 1.37
SYNE4-202ENST00000340477 PHKA1P46020 1223 aa23.63■■□□□ 1.37
SYNE4-202ENST00000340477 CCDC102BQ68D86 513 aa23.63■■□□□ 1.37
SYNE4-202ENST00000340477 SUGT1Q9Y2Z0 365 aa23.63■■□□□ 1.37
SYNE4-202ENST00000340477 HTRA3P83110 453 aa23.62■■□□□ 1.37
SYNE4-202ENST00000340477 NBPF9Q3BBW0 867 aa23.62■■□□□ 1.37
SYNE4-202ENST00000340477 CFAP100Q494V2 611 aa23.62■■□□□ 1.37
SYNE4-202ENST00000340477 ZGPATQ8N5A5 531 aaKnown RBP23.62■■□□□ 1.37
SYNE4-202ENST00000340477 MTMR14Q8NCE2 650 aa23.62■■□□□ 1.37
SYNE4-202ENST00000340477 ZNF408Q9H9D4 720 aa23.62■■□□□ 1.37
SYNE4-202ENST00000340477 SERPINA10Q9UK55 444 aa23.62■■□□□ 1.37
SYNE4-202ENST00000340477 ABT1Q9ULW3 272 aaKnown RBP23.62■■□□□ 1.37
SYNE4-202ENST00000340477 CELF2O95319 508 aaKnown RBP23.61■■□□□ 1.37
SYNE4-202ENST00000340477 TNNI3KQ59H18 835 aa23.61■■□□□ 1.37
SYNE4-202ENST00000340477 APOBEC3FQ8IUX4 373 aaKnown RBP23.61■■□□□ 1.37
SYNE4-202ENST00000340477 EXOC6BQ9Y2D4 811 aa23.61■■□□□ 1.37
SYNE4-202ENST00000340477 FPGT-TNNI3KV9GXZ4 949 aa23.61■■□□□ 1.37
SYNE4-202ENST00000340477 ASTN2O75129 1339 aaPredicted RBP23.6■■□□□ 1.37
SYNE4-202ENST00000340477 ADM5C9JUS6 153 aa23.6■■□□□ 1.37
SYNE4-202ENST00000340477 PDS5AQ29RF7 1337 aaKnown RBP23.59■■□□□ 1.37
SYNE4-202ENST00000340477 ZBTB22O15209 634 aa23.59■■□□□ 1.37
SYNE4-202ENST00000340477 TEKT1Q969V4 418 aa23.59■■□□□ 1.37
SYNE4-202ENST00000340477 COL1A1P02452 1464 aaPredicted RBP23.59■■□□□ 1.37
SYNE4-202ENST00000340477 SPDYE2BA6NHP3 402 aa23.58■■□□□ 1.37
SYNE4-202ENST00000340477 UQCRFS1P1P0C7P4 283 aa23.58■■□□□ 1.37
SYNE4-202ENST00000340477 SPDYE6P0CI01 402 aa23.58■■□□□ 1.37
SYNE4-202ENST00000340477 HDLBPQ00341 1268 aaKnown RBP23.58■■□□□ 1.37
SYNE4-202ENST00000340477 CCDC158Q5M9N0 1113 aa23.58■■□□□ 1.37
SYNE4-202ENST00000340477 LDHBP07195 334 aaKnown RBP23.57■■□□□ 1.36
SYNE4-202ENST00000340477 CRKP46108 304 aa23.57■■□□□ 1.36
SYNE4-202ENST00000340477 RASGRF1Q13972 1273 aa23.57■■□□□ 1.36
SYNE4-202ENST00000340477 TTC39AQ5SRH9 613 aa23.57■■□□□ 1.36
SYNE4-202ENST00000340477 KLRG1Q96E93 195 aa23.57■■□□□ 1.36
SYNE4-202ENST00000340477 ZBED3Q96IU2 234 aaPredicted RBP23.57■■□□□ 1.36
SYNE4-202ENST00000340477 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP23.57■■□□□ 1.36
SYNE4-202ENST00000340477 SALL1Q9NSC2 1324 aa23.57■■□□□ 1.36
SYNE4-202ENST00000340477 RAB11FIP3O75154 756 aa23.56■■□□□ 1.36
SYNE4-202ENST00000340477 FMR1Q06787 632 aaKnown RBP eCLIP23.56■■□□□ 1.36
SYNE4-202ENST00000340477 SPTY2D1Q68D10 685 aaPredicted RBP23.56■■□□□ 1.36
SYNE4-202ENST00000340477 KIF1BPQ96EK5 621 aa23.56■■□□□ 1.36
SYNE4-202ENST00000340477 NF2P35240 595 aa23.55■■□□□ 1.36
SYNE4-202ENST00000340477 CDCA5Q96FF9 252 aa23.55■■□□□ 1.36
Retrieved 100 of 20,778 RNA–protein pairs in 68.5 ms