RNA–Protein interactions for RNA: ENST00000339987.7

SDCBP2-201, Transcript of syndecan binding protein 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SDCBP2, Length 1,404 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDCBP2-201ENST00000339987 FRAT2O75474 233 aaPredicted RBP21.78■■□□□ 1.08
SDCBP2-201ENST00000339987 LMNB1P20700 586 aa21.78■■□□□ 1.08
SDCBP2-201ENST00000339987 PRELPP51888 382 aa21.78■■□□□ 1.08
SDCBP2-201ENST00000339987 FAM205AQ6ZU69 1335 aa21.77■■□□□ 1.08
SDCBP2-201ENST00000339987 SBF1O95248 1867 aa21.77■■□□□ 1.08
SDCBP2-201ENST00000339987 CHD4Q14839 1912 aa21.77■■□□□ 1.08
SDCBP2-201ENST00000339987 GSPT1P15170 499 aaKnown RBP21.76■■□□□ 1.07
SDCBP2-201ENST00000339987 ZAP70P43403 619 aa21.76■■□□□ 1.07
SDCBP2-201ENST00000339987 PI16Q6UXB8 463 aa21.76■■□□□ 1.07
SDCBP2-201ENST00000339987 JDP2Q8WYK2 163 aa21.76■■□□□ 1.07
SDCBP2-201ENST00000339987 SNRKQ9NRH2 765 aa21.76■■□□□ 1.07
SDCBP2-201ENST00000339987 ZNRF3Q9ULT6 936 aa21.76■■□□□ 1.07
SDCBP2-201ENST00000339987 CCDC88AQ3V6T2 1871 aa21.76■■□□□ 1.07
SDCBP2-201ENST00000339987 DICER1Q9UPY3 1922 aaKnown RBP21.76■■□□□ 1.07
SDCBP2-201ENST00000339987 BMP2KLQ5H9B9 411 aa21.75■■□□□ 1.07
SDCBP2-201ENST00000339987 WDR66Q8TBY9 1149 aa21.75■■□□□ 1.07
SDCBP2-201ENST00000339987 DNAJC2Q99543 621 aaKnown RBP21.75■■□□□ 1.07
SDCBP2-201ENST00000339987 PAG1Q9NWQ8 432 aa21.75■■□□□ 1.07
SDCBP2-201ENST00000339987 YDJCA8MPS7 323 aa21.74■■□□□ 1.07
SDCBP2-201ENST00000339987 SCN9AQ15858 1988 aa21.74■■□□□ 1.07
SDCBP2-201ENST00000339987 PSME4Q14997 1843 aa21.74■■□□□ 1.07
SDCBP2-201ENST00000339987 SALL1Q9NSC2 1324 aa21.74■■□□□ 1.07
SDCBP2-201ENST00000339987 CYP2E1P05181 493 aaPredicted RBP21.73■■□□□ 1.07
SDCBP2-201ENST00000339987 CHAF1AQ13111 956 aaPredicted RBP21.73■■□□□ 1.07
SDCBP2-201ENST00000339987 TTF1Q15361 905 aaPredicted RBP21.73■■□□□ 1.07
SDCBP2-201ENST00000339987 STRIP1Q5VSL9 837 aa21.73■■□□□ 1.07
SDCBP2-201ENST00000339987 NDUFB9Q9Y6M9 179 aa21.73■■□□□ 1.07
SDCBP2-201ENST00000339987 USP17L3A6NCW0 530 aa21.72■■□□□ 1.07
SDCBP2-201ENST00000339987 USP17L4A6NCW7 530 aa21.72■■□□□ 1.07
SDCBP2-201ENST00000339987 GOLIM4O00461 696 aa21.72■■□□□ 1.07
SDCBP2-201ENST00000339987 FKBP1AP62942 108 aaKnown RBP21.72■■□□□ 1.07
SDCBP2-201ENST00000339987 GTF2IP78347 998 aa21.72■■□□□ 1.07
SDCBP2-201ENST00000339987 USP17L1Q7RTZ2 530 aa21.72■■□□□ 1.07
SDCBP2-201ENST00000339987 TBC1D22AQ8WUA7 517 aa21.72■■□□□ 1.07
SDCBP2-201ENST00000339987 EVI5LQ96CN4 794 aa21.72■■□□□ 1.07
SDCBP2-201ENST00000339987 ZNF646O15015 1829 aaPredicted RBP21.72■■□□□ 1.07
SDCBP2-201ENST00000339987 FZD9O00144 591 aa21.72■■□□□ 1.07
SDCBP2-201ENST00000339987 SDSP20132 328 aa21.72■■□□□ 1.07
SDCBP2-201ENST00000339987 TTLL5Q6EMB2 1281 aa21.72■■□□□ 1.07
SDCBP2-201ENST00000339987 CNTROBQ8N137 903 aa21.72■■□□□ 1.07
SDCBP2-201ENST00000339987 ZGPATQ8N5A5 531 aaKnown RBP21.72■■□□□ 1.07
SDCBP2-201ENST00000339987 EDC3Q96F86 508 aaKnown RBP21.72■■□□□ 1.07
SDCBP2-201ENST00000339987 TRIM6-TRIM34B2RNG4 842 aa21.71■■□□□ 1.07
SDCBP2-201ENST00000339987 IGSF3O75054 1194 aa21.71■■□□□ 1.07
SDCBP2-201ENST00000339987 MAP4K4O95819 1239 aaPredicted RBP21.71■■□□□ 1.07
SDCBP2-201ENST00000339987 TICAM2Q86XR7 235 aa21.71■■□□□ 1.07
SDCBP2-201ENST00000339987 KBTBD3Q8NAB2 608 aa21.71■■□□□ 1.07
SDCBP2-201ENST00000339987 ANTXR1Q9H6X2 564 aa21.71■■□□□ 1.07
SDCBP2-201ENST00000339987 PIH1D3Q9NQM4 214 aaKnown RBP21.71■■□□□ 1.07
SDCBP2-201ENST00000339987 KCNQ5Q9NR82 932 aa21.71■■□□□ 1.07
SDCBP2-201ENST00000339987 DOCK2Q92608 1830 aa21.7■■□□□ 1.06
SDCBP2-201ENST00000339987 DCAF8L1A6NGE4 600 aa21.7■■□□□ 1.06
SDCBP2-201ENST00000339987 DACT2Q5SW24 774 aa21.7■■□□□ 1.06
SDCBP2-201ENST00000339987 RNF181Q9P0P0 153 aa21.7■■□□□ 1.06
SDCBP2-201ENST00000339987 JAG2Q9Y219 1238 aa21.7■■□□□ 1.06
SDCBP2-201ENST00000339987 MFSD14BQ5SR56 506 aa21.69■■□□□ 1.06
SDCBP2-201ENST00000339987 C9orf131Q5VYM1 1079 aa21.69■■□□□ 1.06
SDCBP2-201ENST00000339987 SPTY2D1Q68D10 685 aaPredicted RBP21.69■■□□□ 1.06
SDCBP2-201ENST00000339987 TBC1D9Q6ZT07 1266 aa21.69■■□□□ 1.06
SDCBP2-201ENST00000339987 FBXW7Q969H0 707 aa21.69■■□□□ 1.06
SDCBP2-201ENST00000339987 SUGT1Q9Y2Z0 365 aa21.69■■□□□ 1.06
SDCBP2-201ENST00000339987 RFX7Q2KHR2 1363 aa21.69■■□□□ 1.06
SDCBP2-201ENST00000339987 TIAM2Q8IVF5 1701 aa21.68■■□□□ 1.06
SDCBP2-201ENST00000339987 VIL1P09327 827 aaKnown RBP21.68■■□□□ 1.06
SDCBP2-201ENST00000339987 EIF6P56537 245 aaKnown RBP21.68■■□□□ 1.06
SDCBP2-201ENST00000339987 CXCL9Q07325 125 aa21.68■■□□□ 1.06
SDCBP2-201ENST00000339987 CIAPIN1Q6FI81 312 aa21.68■■□□□ 1.06
SDCBP2-201ENST00000339987 RILPL2Q969X0 211 aa21.68■■□□□ 1.06
SDCBP2-201ENST00000339987 AK9Q5TCS8 1911 aa21.68■■□□□ 1.06
SDCBP2-201ENST00000339987 MYO3BQ8WXR4 1341 aa21.67■■□□□ 1.06
SDCBP2-201ENST00000339987 ZC3H4Q9UPT8 1303 aaKnown RBP21.67■■□□□ 1.06
SDCBP2-201ENST00000339987 RAD17O75943 681 aa21.67■■□□□ 1.06
SDCBP2-201ENST00000339987 TNIP1Q15025 636 aa21.67■■□□□ 1.06
SDCBP2-201ENST00000339987 FSD1Q9BTV5 496 aa21.67■■□□□ 1.06
SDCBP2-201ENST00000339987 LRP2BPQ9P2M1 347 aa21.67■■□□□ 1.06
SDCBP2-201ENST00000339987 ABCF2Q9UG63 623 aa21.67■■□□□ 1.06
SDCBP2-201ENST00000339987 PSMD14O00487 310 aa21.66■■□□□ 1.06
SDCBP2-201ENST00000339987 LRRFIP1Q32MZ4 808 aaKnown RBP21.66■■□□□ 1.06
SDCBP2-201ENST00000339987 TMED8Q6PL24 325 aaPredicted RBP21.66■■□□□ 1.06
SDCBP2-201ENST00000339987 ERICH6Q7L0X2 663 aa21.66■■□□□ 1.06
SDCBP2-201ENST00000339987 CERS5Q8N5B7 392 aa21.66■■□□□ 1.06
SDCBP2-201ENST00000339987 DDX24Q9GZR7 859 aaKnown RBP eCLIP21.66■■□□□ 1.06
SDCBP2-201ENST00000339987 MYO5AQ9Y4I1 1855 aaKnown RBP21.65■■□□□ 1.06
SDCBP2-201ENST00000339987 LDHBP07195 334 aaKnown RBP21.65■■□□□ 1.06
SDCBP2-201ENST00000339987 MAP3K12Q12852 859 aa21.65■■□□□ 1.06
SDCBP2-201ENST00000339987 RSBN1LQ6PCB5 846 aaPredicted RBP21.65■■□□□ 1.06
SDCBP2-201ENST00000339987 MAST2Q6P0Q8 1798 aa21.65■■□□□ 1.06
SDCBP2-201ENST00000339987 IDH1O75874 414 aaKnown RBP21.64■■□□□ 1.06
SDCBP2-201ENST00000339987 ZFYP08048 801 aaPredicted RBP21.64■■□□□ 1.06
SDCBP2-201ENST00000339987 PRDX5P30044 214 aa21.64■■□□□ 1.06
SDCBP2-201ENST00000339987 ZSCAN25Q6NSZ9 544 aa21.64■■□□□ 1.06
SDCBP2-201ENST00000339987 MYH7P12883 1935 aa21.64■■□□□ 1.06
SDCBP2-201ENST00000339987 ZNF541Q9H0D2 1346 aa21.64■■□□□ 1.05
SDCBP2-201ENST00000339987 AGBL3Q8NEM8 1001 aa21.63■■□□□ 1.05
SDCBP2-201ENST00000339987 GMLQ99445 158 aa21.63■■□□□ 1.05
SDCBP2-201ENST00000339987 MXD3Q9BW11 206 aa21.63■■□□□ 1.05
SDCBP2-201ENST00000339987 RAI14Q9P0K7 980 aa21.63■■□□□ 1.05
SDCBP2-201ENST00000339987 HIP1O00291 1037 aa21.63■■□□□ 1.05
SDCBP2-201ENST00000339987 GRIK5Q16478 980 aa21.63■■□□□ 1.05
SDCBP2-201ENST00000339987 MAST3O60307 1309 aa21.62■■□□□ 1.05
Retrieved 100 of 20,778 RNA–protein pairs in 59.1 ms