RNA–Protein interactions for RNA: ENST00000339436.11

SRSF3-201, Transcript of serine and arginine rich splicing factor 3, humanhuman

TSL 2

Gene SRSF3, Length 1,518 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRSF3-201ENST00000339436 MXD3Q9BW11 206 aa15.84■□□□□ 0.13
SRSF3-201ENST00000339436 IQSEC3Q9UPP2 1182 aaPredicted RBP15.84■□□□□ 0.13
SRSF3-201ENST00000339436 JAG2Q9Y219 1238 aa15.84■□□□□ 0.13
SRSF3-201ENST00000339436 ZBTB22O15209 634 aa15.83■□□□□ 0.12
SRSF3-201ENST00000339436 IRX6P78412 446 aaPredicted RBP15.83■□□□□ 0.12
SRSF3-201ENST00000339436 CCDC102BQ68D86 513 aa15.83■□□□□ 0.12
SRSF3-201ENST00000339436 CERS5Q8N5B7 392 aa15.83■□□□□ 0.12
SRSF3-201ENST00000339436 RHPN1Q8TCX5 695 aa15.83■□□□□ 0.12
SRSF3-201ENST00000339436 NEUROD6Q96NK8 337 aa15.83■□□□□ 0.12
SRSF3-201ENST00000339436 CNOT7Q9UIV1 285 aaKnown RBP15.83■□□□□ 0.12
SRSF3-201ENST00000339436 MAST2Q6P0Q8 1798 aa15.82■□□□□ 0.12
SRSF3-201ENST00000339436 MYH2Q9UKX2 1941 aa15.82■□□□□ 0.12
SRSF3-201ENST00000339436 APBB1O00213 710 aa15.82■□□□□ 0.12
SRSF3-201ENST00000339436 RAB11FIP3O75154 756 aa15.82■□□□□ 0.12
SRSF3-201ENST00000339436 FRAT2O75474 233 aaPredicted RBP15.82■□□□□ 0.12
SRSF3-201ENST00000339436 FKBP1AP62942 108 aaKnown RBP15.82■□□□□ 0.12
SRSF3-201ENST00000339436 C16orf71Q8IYS4 520 aaPredicted RBP15.82■□□□□ 0.12
SRSF3-201ENST00000339436 ADARB2Q9NS39 739 aaKnown RBP15.82■□□□□ 0.12
SRSF3-201ENST00000339436 GNL3LQ9NVN8 582 aaKnown RBP15.82■□□□□ 0.12
SRSF3-201ENST00000339436 DOCK2Q92608 1830 aa15.81■□□□□ 0.12
SRSF3-201ENST00000339436 SEMA3EO15041 775 aa15.81■□□□□ 0.12
SRSF3-201ENST00000339436 ZNF280AP59817 542 aaPredicted RBP15.81■□□□□ 0.12
SRSF3-201ENST00000339436 MFSD14BQ5SR56 506 aa15.81■□□□□ 0.12
SRSF3-201ENST00000339436 PNMA8AQ86V59 439 aaPredicted RBP15.81■□□□□ 0.12
SRSF3-201ENST00000339436 EAF2Q96CJ1 260 aaPredicted RBP15.81■□□□□ 0.12
SRSF3-201ENST00000339436 DBNDD2Q9BQY9 259 aa15.81■□□□□ 0.12
SRSF3-201ENST00000339436 DCTPP1Q9H773 170 aa15.81■□□□□ 0.12
SRSF3-201ENST00000339436 IL1RAPL2Q9NP60 686 aa15.81■□□□□ 0.12
SRSF3-201ENST00000339436 DBNLQ9UJU6 430 aaKnown RBP15.81■□□□□ 0.12
SRSF3-201ENST00000339436 H7C1D1 291 aa15.8■□□□□ 0.12
SRSF3-201ENST00000339436 TOMM70O94826 608 aa15.8■□□□□ 0.12
SRSF3-201ENST00000339436 USP17L8P0C7I0 530 aa15.8■□□□□ 0.12
SRSF3-201ENST00000339436 POTEIP0CG38 1075 aa15.8■□□□□ 0.12
SRSF3-201ENST00000339436 POTEJP0CG39 1038 aa15.8■□□□□ 0.12
SRSF3-201ENST00000339436 CHAF1AQ13111 956 aaPredicted RBP15.8■□□□□ 0.12
SRSF3-201ENST00000339436 HDAC1Q13547 482 aaPredicted RBP15.8■□□□□ 0.12
SRSF3-201ENST00000339436 RASGRF1Q13972 1273 aa15.8■□□□□ 0.12
SRSF3-201ENST00000339436 TRPM4Q8TD43 1214 aa15.8■□□□□ 0.12
SRSF3-201ENST00000339436 TLR7Q9NYK1 1049 aaKnown RBP15.8■□□□□ 0.12
SRSF3-201ENST00000339436 PDS5AQ29RF7 1337 aaKnown RBP15.8■□□□□ 0.12
SRSF3-201ENST00000339436 TRPM7Q96QT4 1865 aa15.8■□□□□ 0.12
SRSF3-201ENST00000339436 ARID4AP29374 1257 aaPredicted RBP15.79■□□□□ 0.12
SRSF3-201ENST00000339436 EAPPQ56P03 285 aaPredicted RBP15.79■□□□□ 0.12
SRSF3-201ENST00000339436 GORABQ5T7V8 394 aa15.79■□□□□ 0.12
SRSF3-201ENST00000339436 USP50Q70EL3 339 aaPredicted RBP15.79■□□□□ 0.12
SRSF3-201ENST00000339436 AACSQ86V21 672 aa15.79■□□□□ 0.12
SRSF3-201ENST00000339436 LDHDQ86WU2 507 aa15.79■□□□□ 0.12
SRSF3-201ENST00000339436 KIAA0825Q8IV33 1275 aa15.79■□□□□ 0.12
SRSF3-201ENST00000339436 RBM46Q8TBY0 533 aaKnown RBP15.79■□□□□ 0.12
SRSF3-201ENST00000339436 TBC1D22AQ8WUA7 517 aa15.79■□□□□ 0.12
SRSF3-201ENST00000339436 MYH7P12883 1935 aa15.79■□□□□ 0.12
SRSF3-201ENST00000339436 EGFRP00533 1210 aa15.78■□□□□ 0.12
SRSF3-201ENST00000339436 SAMD7Q7Z3H4 446 aa15.78■□□□□ 0.12
SRSF3-201ENST00000339436 CLASRPQ8N2M8 674 aaKnown RBP15.78■□□□□ 0.12
SRSF3-201ENST00000339436 LRRCC1Q9C099 1032 aa15.78■□□□□ 0.12
SRSF3-201ENST00000339436 DENND2AQ9ULE3 1009 aa15.78■□□□□ 0.12
SRSF3-201ENST00000339436 CEP350Q5VT06 3117 aa15.78■□□□□ 0.12
SRSF3-201ENST00000339436 CENPBP07199 599 aaPredicted RBP15.78■□□□□ 0.12
SRSF3-201ENST00000339436 MMP14P50281 582 aa15.78■□□□□ 0.12
SRSF3-201ENST00000339436 KIF4BQ2VIQ3 1234 aa15.78■□□□□ 0.12
SRSF3-201ENST00000339436 TBC1D10BQ4KMP7 808 aaPredicted RBP15.78■□□□□ 0.12
SRSF3-201ENST00000339436 OGFOD1Q8N543 542 aa15.78■□□□□ 0.12
SRSF3-201ENST00000339436 WDR66Q8TBY9 1149 aa15.78■□□□□ 0.12
SRSF3-201ENST00000339436 CCDC8Q9H0W5 538 aaPredicted RBP15.78■□□□□ 0.12
SRSF3-201ENST00000339436 SALL1Q9NSC2 1324 aa15.77■□□□□ 0.11
SRSF3-201ENST00000339436 UQCRFS1P1P0C7P4 283 aa15.77■□□□□ 0.11
SRSF3-201ENST00000339436 HIRAP54198 1017 aaPredicted RBP15.77■□□□□ 0.11
SRSF3-201ENST00000339436 SMC1BQ8NDV3 1235 aa15.77■□□□□ 0.11
SRSF3-201ENST00000339436 MYOZ2Q9NPC6 264 aa15.77■□□□□ 0.11
SRSF3-201ENST00000339436 HDAC9Q9UKV0 1011 aa15.77■□□□□ 0.11
SRSF3-201ENST00000339436 F8W031 263 aaPredicted RBP15.76■□□□□ 0.11
SRSF3-201ENST00000339436 MCAMP43121 646 aa15.76■□□□□ 0.11
SRSF3-201ENST00000339436 SCARF1Q14162 830 aa15.76■□□□□ 0.11
SRSF3-201ENST00000339436 GRIK5Q16478 980 aa15.76■□□□□ 0.11
SRSF3-201ENST00000339436 CCDC158Q5M9N0 1113 aa15.76■□□□□ 0.11
SRSF3-201ENST00000339436 TTC39AQ5SRH9 613 aa15.76■□□□□ 0.11
SRSF3-201ENST00000339436 ZNF512BQ96KM6 892 aaPredicted RBP15.76■□□□□ 0.11
SRSF3-201ENST00000339436 SUGT1Q9Y2Z0 365 aa15.76■□□□□ 0.11
SRSF3-201ENST00000339436 SMARCA5O60264 1052 aaPredicted RBP15.75■□□□□ 0.11
SRSF3-201ENST00000339436 CHADLQ6NUI6 762 aa15.75■□□□□ 0.11
SRSF3-201ENST00000339436 PI16Q6UXB8 463 aa15.75■□□□□ 0.11
SRSF3-201ENST00000339436 SPATA5Q8NB90 893 aa15.75■□□□□ 0.11
SRSF3-201ENST00000339436 HMG20BQ9P0W2 317 aa15.75■□□□□ 0.11
SRSF3-201ENST00000339436 TTF2Q9UNY4 1162 aaKnown RBP15.75■□□□□ 0.11
SRSF3-201ENST00000339436 IFIT2P09913 472 aaKnown RBP15.74■□□□□ 0.11
SRSF3-201ENST00000339436 FSTL1Q12841 308 aa15.74■□□□□ 0.11
SRSF3-201ENST00000339436 RBM26Q5T8P6 1007 aaKnown RBP15.74■□□□□ 0.11
SRSF3-201ENST00000339436 ZC3H15Q8WU90 426 aaKnown RBP15.74■□□□□ 0.11
SRSF3-201ENST00000339436 GCC1Q96CN9 775 aa15.74■□□□□ 0.11
SRSF3-201ENST00000339436 MAST3O60307 1309 aa15.74■□□□□ 0.11
SRSF3-201ENST00000339436 PRDX5P30044 214 aa15.73■□□□□ 0.11
SRSF3-201ENST00000339436 ZGPATQ8N5A5 531 aaKnown RBP15.73■□□□□ 0.11
SRSF3-201ENST00000339436 ZBED3Q96IU2 234 aaPredicted RBP15.73■□□□□ 0.11
SRSF3-201ENST00000339436 BCL11AQ9H165 835 aa15.73■□□□□ 0.11
SRSF3-201ENST00000339436 RWDD1Q9H446 243 aaPredicted RBP15.73■□□□□ 0.11
SRSF3-201ENST00000339436 PGAP2Q9UHJ9 254 aa15.73■□□□□ 0.11
SRSF3-201ENST00000339436 CLEC11AQ9Y240 323 aa15.73■□□□□ 0.11
SRSF3-201ENST00000339436 C1QTNF8P60827 252 aa15.73■□□□□ 0.11
SRSF3-201ENST00000339436 MAP1SQ66K74 1059 aaPredicted RBP15.73■□□□□ 0.11
SRSF3-201ENST00000339436 MTMR14Q8NCE2 650 aa15.73■□□□□ 0.11
Retrieved 100 of 20,778 RNA–protein pairs in 37.1 ms