RNA–Protein interactions for RNA: ENST00000337331.9

NPHP3-201, Transcript of nephrocystin 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NPHP3, Length 4,362 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPHP3-201ENST00000337331 FKBP15Q5T1M5 1219 aa18.28■□□□□ 0.52
NPHP3-201ENST00000337331 MRPS27Q92552 414 aaKnown RBP18.28■□□□□ 0.52
NPHP3-201ENST00000337331 MPHOSPH10O00566 681 aaKnown RBP18.28■□□□□ 0.52
NPHP3-201ENST00000337331 ZNF76P36508 570 aa18.28■□□□□ 0.52
NPHP3-201ENST00000337331 TTC6Q86TZ1 520 aa18.28■□□□□ 0.52
NPHP3-201ENST00000337331 SUFUQ9UMX1 484 aa18.28■□□□□ 0.52
NPHP3-201ENST00000337331 NCOA3Q9Y6Q9 1424 aa18.27■□□□□ 0.52
NPHP3-201ENST00000337331 CHMP4BP1P59074 171 aa18.27■□□□□ 0.52
NPHP3-201ENST00000337331 ENOX2Q16206 610 aaKnown RBP18.27■□□□□ 0.52
NPHP3-201ENST00000337331 CREB3L3Q68CJ9 461 aa18.27■□□□□ 0.52
NPHP3-201ENST00000337331 CACNA2D4Q7Z3S7 1137 aa18.27■□□□□ 0.52
NPHP3-201ENST00000337331 CAPN7Q9Y6W3 813 aa18.27■□□□□ 0.52
NPHP3-201ENST00000337331 EIF2AK4Q9P2K8 1649 aaKnown RBP18.27■□□□□ 0.52
NPHP3-201ENST00000337331 FRMD3A2A2Y4 597 aa18.27■□□□□ 0.52
NPHP3-201ENST00000337331 FAN1Q9Y2M0 1017 aa18.27■□□□□ 0.52
NPHP3-201ENST00000337331 TMEM132AQ24JP5 1023 aa18.27■□□□□ 0.51
NPHP3-201ENST00000337331 ALG1Q9BT22 464 aa18.27■□□□□ 0.51
NPHP3-201ENST00000337331 UHRF1BP1LA0JNW5 1464 aa18.27■□□□□ 0.51
NPHP3-201ENST00000337331 DNA2P51530 1060 aa18.26■□□□□ 0.51
NPHP3-201ENST00000337331 NLRP1Q9C000 1473 aa18.26■□□□□ 0.51
NPHP3-201ENST00000337331 ZBTB43O43298 467 aa18.26■□□□□ 0.51
NPHP3-201ENST00000337331 ZFYP08048 801 aaPredicted RBP18.26■□□□□ 0.51
NPHP3-201ENST00000337331 MARCKSP29966 332 aaPredicted RBP18.26■□□□□ 0.51
NPHP3-201ENST00000337331 CCDC144BQ3MJ40 725 aa18.26■□□□□ 0.51
NPHP3-201ENST00000337331 CHST3Q7LGC8 479 aa18.26■□□□□ 0.51
NPHP3-201ENST00000337331 KCNG4Q8TDN1 519 aa18.26■□□□□ 0.51
NPHP3-201ENST00000337331 SHANK2Q9UPX8 1470 aa18.26■□□□□ 0.51
NPHP3-201ENST00000337331 NR1I2O75469 434 aa18.26■□□□□ 0.51
NPHP3-201ENST00000337331 ZNF853P0CG23 659 aa18.26■□□□□ 0.51
NPHP3-201ENST00000337331 LONRF2Q1L5Z9 754 aa18.26■□□□□ 0.51
NPHP3-201ENST00000337331 ATRIPQ8WXE1 791 aa18.26■□□□□ 0.51
NPHP3-201ENST00000337331 RBM28Q9NW13 759 aaKnown RBP18.26■□□□□ 0.51
NPHP3-201ENST00000337331 UBA7P41226 1012 aa18.26■□□□□ 0.51
NPHP3-201ENST00000337331 TAX1BP1Q86VP1 789 aa18.26■□□□□ 0.51
NPHP3-201ENST00000337331 EFCAB13Q8IY85 973 aa18.26■□□□□ 0.51
NPHP3-201ENST00000337331 CEP112Q8N8E3 955 aa18.26■□□□□ 0.51
NPHP3-201ENST00000337331 SLC24A3Q9HC58 644 aa18.26■□□□□ 0.51
NPHP3-201ENST00000337331 BCCIPQ9P287 314 aaKnown RBP eCLIP18.26■□□□□ 0.51
NPHP3-201ENST00000337331 ZBTB12Q9Y330 459 aaPredicted RBP18.26■□□□□ 0.51
NPHP3-201ENST00000337331 MSH6P52701 1360 aa18.25■□□□□ 0.51
NPHP3-201ENST00000337331 A0A087WWV3 80 aa18.25■□□□□ 0.51
NPHP3-201ENST00000337331 GDAP1L1Q96MZ0 367 aa18.25■□□□□ 0.51
NPHP3-201ENST00000337331 TEX13AQ9BXU3 409 aaPredicted RBP18.25■□□□□ 0.51
NPHP3-201ENST00000337331 ANKIB1Q9P2G1 1089 aa18.25■□□□□ 0.51
NPHP3-201ENST00000337331 RIMS2Q9UQ26 1411 aa18.25■□□□□ 0.51
NPHP3-201ENST00000337331 YEATS4O95619 227 aa18.25■□□□□ 0.51
NPHP3-201ENST00000337331 NEFHP12036 1026 aa18.25■□□□□ 0.51
NPHP3-201ENST00000337331 IDEP14735 1019 aa18.25■□□□□ 0.51
NPHP3-201ENST00000337331 IL15P40933 162 aaPredicted RBP18.25■□□□□ 0.51
NPHP3-201ENST00000337331 FAM76AQ8TAV0 307 aa18.25■□□□□ 0.51
NPHP3-201ENST00000337331 PPP1R13BQ96KQ4 1090 aa18.25■□□□□ 0.51
NPHP3-201ENST00000337331 BCORL1Q5H9F3 1711 aa18.25■□□□□ 0.51
NPHP3-201ENST00000337331 A0A087WUV0 522 aaPredicted RBP18.24■□□□□ 0.51
NPHP3-201ENST00000337331 EXOC5O00471 708 aa18.24■□□□□ 0.51
NPHP3-201ENST00000337331 PEX19P40855 299 aa18.24■□□□□ 0.51
NPHP3-201ENST00000337331 CCT5P48643 541 aa18.24■□□□□ 0.51
NPHP3-201ENST00000337331 CUL4AQ13619 759 aa18.24■□□□□ 0.51
NPHP3-201ENST00000337331 NFATC2IPQ8NCF5 419 aa18.24■□□□□ 0.51
NPHP3-201ENST00000337331 XPO4Q9C0E2 1151 aaKnown RBP18.24■□□□□ 0.51
NPHP3-201ENST00000337331 NDUFAB1O14561 156 aa18.24■□□□□ 0.51
NPHP3-201ENST00000337331 ZPR1O75312 459 aa18.24■□□□□ 0.51
NPHP3-201ENST00000337331 BIRC2Q13490 618 aa18.24■□□□□ 0.51
NPHP3-201ENST00000337331 CCDC114Q96M63 670 aa18.24■□□□□ 0.51
NPHP3-201ENST00000337331 ABCA8O94911 1581 aa18.24■□□□□ 0.51
NPHP3-201ENST00000337331 TSPY2A6NKD2 308 aa18.23■□□□□ 0.51
NPHP3-201ENST00000337331 ATP8B1O43520 1251 aa18.23■□□□□ 0.51
NPHP3-201ENST00000337331 ADAMTS2O95450 1211 aa18.23■□□□□ 0.51
NPHP3-201ENST00000337331 IL13P35225 146 aa18.23■□□□□ 0.51
NPHP3-201ENST00000337331 TDRD12Q587J7 1177 aaKnown RBP18.23■□□□□ 0.51
NPHP3-201ENST00000337331 POTEDQ86YR6 584 aa18.23■□□□□ 0.51
NPHP3-201ENST00000337331 LEO1Q8WVC0 666 aaPredicted RBP18.23■□□□□ 0.51
NPHP3-201ENST00000337331 MRFAP1L1Q96HT8 127 aa18.23■□□□□ 0.51
NPHP3-201ENST00000337331 FBXO3Q9UK99 471 aa18.23■□□□□ 0.51
NPHP3-201ENST00000337331 MTIF2P46199 727 aaKnown RBP18.23■□□□□ 0.51
NPHP3-201ENST00000337331 SLC9C2Q5TAH2 1124 aa18.23■□□□□ 0.51
NPHP3-201ENST00000337331 TDRD7Q8NHU6 1098 aaKnown RBP18.23■□□□□ 0.51
NPHP3-201ENST00000337331 IQSEC3Q9UPP2 1182 aaPredicted RBP18.23■□□□□ 0.51
NPHP3-201ENST00000337331 ZNF518AQ6AHZ1 1483 aa18.23■□□□□ 0.51
NPHP3-201ENST00000337331 ZFYVE9O95405 1425 aa18.23■□□□□ 0.51
NPHP3-201ENST00000337331 N4BP3O15049 544 aa18.23■□□□□ 0.51
NPHP3-201ENST00000337331 GCKP35557 465 aa18.23■□□□□ 0.51
NPHP3-201ENST00000337331 ZNF569Q5MCW4 686 aa18.23■□□□□ 0.51
NPHP3-201ENST00000337331 CDC37L1Q7L3B6 337 aa18.23■□□□□ 0.51
NPHP3-201ENST00000337331 VEZTQ9HBM0 779 aa18.23■□□□□ 0.51
NPHP3-201ENST00000337331 WTAPQ15007 396 aa18.23■□□□□ 0.51
NPHP3-201ENST00000337331 MCM3P25205 808 aa18.22■□□□□ 0.51
NPHP3-201ENST00000337331 RAB34Q9BZG1 259 aa18.22■□□□□ 0.51
NPHP3-201ENST00000337331 PAG1Q9NWQ8 432 aa18.22■□□□□ 0.51
NPHP3-201ENST00000337331 CHL1O00533 1208 aa18.22■□□□□ 0.51
NPHP3-201ENST00000337331 DYDC1Q8WWB3 177 aa18.22■□□□□ 0.51
NPHP3-201ENST00000337331 PARD6BQ9BYG5 372 aa18.22■□□□□ 0.51
NPHP3-201ENST00000337331 BICC1Q9H694 974 aaKnown RBP18.22■□□□□ 0.51
NPHP3-201ENST00000337331 MTMR6Q9Y217 621 aa18.22■□□□□ 0.51
NPHP3-201ENST00000337331 PAFAH1B1P43034 410 aa18.22■□□□□ 0.51
NPHP3-201ENST00000337331 APOBRQ0VD83 1088 aa18.22■□□□□ 0.51
NPHP3-201ENST00000337331 KANK3Q6NY19 840 aa18.22■□□□□ 0.51
NPHP3-201ENST00000337331 FMNL3Q8IVF7 1028 aa18.22■□□□□ 0.51
NPHP3-201ENST00000337331 TCP11L1Q9NUJ3 509 aa18.22■□□□□ 0.51
NPHP3-201ENST00000337331 UQCRFS1P1P0C7P4 283 aa18.21■□□□□ 0.51
NPHP3-201ENST00000337331 CDC5LQ99459 802 aaKnown RBP18.21■□□□□ 0.51
Retrieved 100 of 20,778 RNA–protein pairs in 23.2 ms