RNA–Protein interactions for RNA: ENST00000336873.9

HPS4-201, Transcript of HPS4, biogenesis of lysosomal organelles complex 3 subunit 2, humanhuman

APPRIS P1 TSL 5 BASIC

Gene HPS4, Length 3,786 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HPS4-201ENST00000336873 PUS7LQ9H0K6 701 aaKnown RBP9.54□□□□□ -0.88
HPS4-201ENST00000336873 VAT1LQ9HCJ6 419 aa9.54□□□□□ -0.88
HPS4-201ENST00000336873 SYKP43405 635 aa9.54□□□□□ -0.88
HPS4-201ENST00000336873 TRMT1LQ7Z2T5 733 aaKnown RBP9.54□□□□□ -0.88
HPS4-201ENST00000336873 TRMT44Q8IYL2 757 aaKnown RBP9.54□□□□□ -0.88
HPS4-201ENST00000336873 PLBD2Q8NHP8 589 aa9.54□□□□□ -0.88
HPS4-201ENST00000336873 BAZ2BQ9UIF8 2168 aaKnown RBP9.54□□□□□ -0.88
HPS4-201ENST00000336873 CLSTN1O94985 981 aa9.53□□□□□ -0.88
HPS4-201ENST00000336873 SCARF1Q14162 830 aa9.53□□□□□ -0.88
HPS4-201ENST00000336873 MRPS27Q92552 414 aaKnown RBP9.53□□□□□ -0.88
HPS4-201ENST00000336873 GTF3C6Q969F1 213 aa9.53□□□□□ -0.88
HPS4-201ENST00000336873 AKAP2Q9Y2D5 859 aa9.53□□□□□ -0.88
HPS4-201ENST00000336873 CLIC4Q9Y696 253 aa9.53□□□□□ -0.88
HPS4-201ENST00000336873 MRVI1Q9Y6F6 885 aa9.53□□□□□ -0.88
HPS4-201ENST00000336873 CEP170BQ9Y4F5 1589 aaPredicted RBP9.53□□□□□ -0.88
HPS4-201ENST00000336873 NPHP4O75161 1426 aaPredicted RBP9.53□□□□□ -0.88
HPS4-201ENST00000336873 DNA2P51530 1060 aa9.53□□□□□ -0.88
HPS4-201ENST00000336873 GREM2Q9H772 168 aa9.53□□□□□ -0.88
HPS4-201ENST00000336873 PREX1Q8TCU6 1659 aa9.53□□□□□ -0.88
HPS4-201ENST00000336873 MBD4O95243 580 aa9.53□□□□□ -0.88
HPS4-201ENST00000336873 IL2RBP14784 551 aa9.53□□□□□ -0.88
HPS4-201ENST00000336873 ATP5JP18859 108 aa9.53□□□□□ -0.88
HPS4-201ENST00000336873 PPARDQ03181 441 aa9.53□□□□□ -0.88
HPS4-201ENST00000336873 STX1AQ16623 288 aa9.53□□□□□ -0.88
HPS4-201ENST00000336873 CEP135Q66GS9 1140 aa9.53□□□□□ -0.88
HPS4-201ENST00000336873 PGBD1Q96JS3 809 aa9.53□□□□□ -0.88
HPS4-201ENST00000336873 DNAI1Q9UI46 699 aa9.53□□□□□ -0.88
HPS4-201ENST00000336873 SLC4A4Q9Y6R1 1079 aa9.53□□□□□ -0.88
HPS4-201ENST00000336873 M0R2C6 588 aa9.52□□□□□ -0.88
HPS4-201ENST00000336873 EXOC5O00471 708 aa9.52□□□□□ -0.88
HPS4-201ENST00000336873 ZBTB43O43298 467 aa9.52□□□□□ -0.88
HPS4-201ENST00000336873 ENOX2Q16206 610 aaKnown RBP9.52□□□□□ -0.88
HPS4-201ENST00000336873 SYT10Q6XYQ8 523 aa9.52□□□□□ -0.88
HPS4-201ENST00000336873 DZIP3Q86Y13 1208 aaKnown RBP9.52□□□□□ -0.88
HPS4-201ENST00000336873 SDR42E1Q8WUS8 393 aa9.52□□□□□ -0.88
HPS4-201ENST00000336873 UBE2Q2LH0YL09 131 aa9.52□□□□□ -0.89
HPS4-201ENST00000336873 HMGB1P09429 215 aaKnown RBP9.52□□□□□ -0.89
HPS4-201ENST00000336873 STOX1Q6ZVD7 989 aa9.52□□□□□ -0.89
HPS4-201ENST00000336873 NIP7Q9Y221 180 aaKnown RBP eCLIP9.52□□□□□ -0.89
HPS4-201ENST00000336873 KDRP35968 1356 aa9.52□□□□□ -0.89
HPS4-201ENST00000336873 KIF24Q5T7B8 1368 aa9.52□□□□□ -0.89
HPS4-201ENST00000336873 PTPRUQ92729 1446 aa9.52□□□□□ -0.89
HPS4-201ENST00000336873 KIF20BQ96Q89 1820 aa9.52□□□□□ -0.89
HPS4-201ENST00000336873 VGLL3A8MV65 326 aa9.52□□□□□ -0.89
HPS4-201ENST00000336873 G3V3G9 751 aa9.52□□□□□ -0.89
HPS4-201ENST00000336873 ATP6V1AP38606 617 aa9.52□□□□□ -0.89
HPS4-201ENST00000336873 IGHMBP2P38935 993 aaKnown RBP9.52□□□□□ -0.89
HPS4-201ENST00000336873 PHKA1P46020 1223 aa9.52□□□□□ -0.89
HPS4-201ENST00000336873 NDUFA8P51970 172 aa9.52□□□□□ -0.89
HPS4-201ENST00000336873 UBASH3AP57075 661 aa9.52□□□□□ -0.89
HPS4-201ENST00000336873 UVSSAQ2YD98 709 aa9.52□□□□□ -0.89
HPS4-201ENST00000336873 DCAF8Q5TAQ9 597 aa9.52□□□□□ -0.89
HPS4-201ENST00000336873 CACTINQ8WUQ7 758 aaKnown RBP9.52□□□□□ -0.89
HPS4-201ENST00000336873 HINFPQ9BQA5 517 aa9.52□□□□□ -0.89
HPS4-201ENST00000336873 NACAP1Q9BZK3 213 aa9.52□□□□□ -0.89
HPS4-201ENST00000336873 BCL2L12Q9HB09 334 aa9.52□□□□□ -0.89
HPS4-201ENST00000336873 ZNF219Q9P2Y4 722 aaPredicted RBP9.52□□□□□ -0.89
HPS4-201ENST00000336873 DYNC1I1O14576 645 aa9.51□□□□□ -0.89
HPS4-201ENST00000336873 MAP3K12Q12852 859 aa9.51□□□□□ -0.89
HPS4-201ENST00000336873 KARSQ15046 597 aaKnown RBP9.51□□□□□ -0.89
HPS4-201ENST00000336873 HLFQ16534 295 aa9.51□□□□□ -0.89
HPS4-201ENST00000336873 TEX35Q5T0J7 233 aa9.51□□□□□ -0.89
HPS4-201ENST00000336873 MFSD6Q6ZSS7 791 aa9.51□□□□□ -0.89
HPS4-201ENST00000336873 UTP14AQ9BVJ6 771 aaKnown RBP9.51□□□□□ -0.89
HPS4-201ENST00000336873 ZSCAN16Q9H4T2 348 aaPredicted RBP9.51□□□□□ -0.89
HPS4-201ENST00000336873 AP5Z1O43299 807 aa9.51□□□□□ -0.89
HPS4-201ENST00000336873 PRKAB2O43741 272 aa9.51□□□□□ -0.89
HPS4-201ENST00000336873 TOP1P11387 765 aaKnown RBP9.51□□□□□ -0.89
HPS4-201ENST00000336873 CYP7A1P22680 504 aa9.51□□□□□ -0.89
HPS4-201ENST00000336873 DHX37Q8IY37 1157 aaKnown RBP9.51□□□□□ -0.89
HPS4-201ENST00000336873 MAP7D2Q96T17 732 aa9.51□□□□□ -0.89
HPS4-201ENST00000336873 SEC31BQ9NQW1 1179 aa9.51□□□□□ -0.89
HPS4-201ENST00000336873 ZNF532Q9HCE3 1301 aa9.51□□□□□ -0.89
HPS4-201ENST00000336873 NBPF26B4DH59 902 aa9.51□□□□□ -0.89
HPS4-201ENST00000336873 HOXB7P09629 217 aa9.51□□□□□ -0.89
HPS4-201ENST00000336873 PDIA3P30101 505 aaKnown RBP9.51□□□□□ -0.89
HPS4-201ENST00000336873 PNOCQ13519 176 aa9.51□□□□□ -0.89
HPS4-201ENST00000336873 NBPF14Q5TI25 921 aa9.51□□□□□ -0.89
HPS4-201ENST00000336873 NBPF10Q6P3W6 841 aaKnown RBP9.51□□□□□ -0.89
HPS4-201ENST00000336873 NBPF15Q8N660 670 aa9.51□□□□□ -0.89
HPS4-201ENST00000336873 DHX58Q96C10 678 aa9.51□□□□□ -0.89
HPS4-201ENST00000336873 CABP5Q9NP86 173 aa9.51□□□□□ -0.89
HPS4-201ENST00000336873 PCDHA7Q9UN72 937 aa9.51□□□□□ -0.89
HPS4-201ENST00000336873 CDC42BPGQ6DT37 1551 aa9.51□□□□□ -0.89
HPS4-201ENST00000336873 RICTORQ6R327 1708 aa9.51□□□□□ -0.89
HPS4-201ENST00000336873 TMEM94Q12767 1356 aa9.51□□□□□ -0.89
HPS4-201ENST00000336873 TPM3P06753 285 aa9.5□□□□□ -0.89
HPS4-201ENST00000336873 BCAMP50895 628 aa9.5□□□□□ -0.89
HPS4-201ENST00000336873 ZNF75DP51815 510 aa9.5□□□□□ -0.89
HPS4-201ENST00000336873 DPCR1Q3MIW9 517 aa9.5□□□□□ -0.89
HPS4-201ENST00000336873 GRAMD1CQ8IYS0 662 aa9.5□□□□□ -0.89
HPS4-201ENST00000336873 STX8Q9UNK0 236 aa9.5□□□□□ -0.89
HPS4-201ENST00000336873 MAST3O60307 1309 aa9.5□□□□□ -0.89
HPS4-201ENST00000336873 RPAP1Q9BWH6 1393 aaPredicted RBP9.5□□□□□ -0.89
HPS4-201ENST00000336873 USP5P45974 858 aa9.5□□□□□ -0.89
HPS4-201ENST00000336873 LONRF3Q496Y0 759 aa9.5□□□□□ -0.89
HPS4-201ENST00000336873 JMYQ8N9B5 988 aa9.5□□□□□ -0.89
HPS4-201ENST00000336873 NSUN7Q8NE18 718 aaKnown RBP9.5□□□□□ -0.89
HPS4-201ENST00000336873 KIF18AQ8NI77 898 aa9.5□□□□□ -0.89
HPS4-201ENST00000336873 CLSTN2Q9H4D0 955 aa9.5□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 136 ms