RNA–Protein interactions for RNA: ENST00000334654.4

CHGA-202, Transcript of chromogranin A, humanhuman

TSL 1 (best) BASIC

Gene CHGA, Length 1,474 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHGA-202ENST00000334654 C9orf131Q5VYM1 1079 aa21.39■■□□□ 1.02
CHGA-202ENST00000334654 NIM1KQ8IY84 436 aa21.39■■□□□ 1.02
CHGA-202ENST00000334654 GNL3LQ9NVN8 582 aaKnown RBP21.39■■□□□ 1.02
CHGA-202ENST00000334654 G3V3G9 751 aa21.39■■□□□ 1.01
CHGA-202ENST00000334654 SEMA3EO15041 775 aa21.39■■□□□ 1.01
CHGA-202ENST00000334654 DCAF8Q5TAQ9 597 aa21.39■■□□□ 1.01
CHGA-202ENST00000334654 JDP2Q8WYK2 163 aa21.39■■□□□ 1.01
CHGA-202ENST00000334654 BOLA2Q9H3K6 86 aa21.39■■□□□ 1.01
CHGA-202ENST00000334654 RNF181Q9P0P0 153 aa21.39■■□□□ 1.01
CHGA-202ENST00000334654 FAM205AQ6ZU69 1335 aa21.39■■□□□ 1.01
CHGA-202ENST00000334654 AOX1Q06278 1338 aa21.38■■□□□ 1.01
CHGA-202ENST00000334654 SNRKQ9NRH2 765 aa21.38■■□□□ 1.01
CHGA-202ENST00000334654 NDUFB9Q9Y6M9 179 aa21.38■■□□□ 1.01
CHGA-202ENST00000334654 MYO5AQ9Y4I1 1855 aaKnown RBP21.37■■□□□ 1.01
CHGA-202ENST00000334654 TIAM2Q8IVF5 1701 aa21.37■■□□□ 1.01
CHGA-202ENST00000334654 PDS5AQ29RF7 1337 aaKnown RBP21.37■■□□□ 1.01
CHGA-202ENST00000334654 ZAP70P43403 619 aa21.37■■□□□ 1.01
CHGA-202ENST00000334654 SPATA5Q8NB90 893 aa21.37■■□□□ 1.01
CHGA-202ENST00000334654 GPATCH3Q96I76 525 aa21.37■■□□□ 1.01
CHGA-202ENST00000334654 HAUS7Q99871 368 aa21.37■■□□□ 1.01
CHGA-202ENST00000334654 DENND2AQ9ULE3 1009 aa21.37■■□□□ 1.01
CHGA-202ENST00000334654 GTF2IP78347 998 aa21.36■■□□□ 1.01
CHGA-202ENST00000334654 CXCL9Q07325 125 aa21.36■■□□□ 1.01
CHGA-202ENST00000334654 JAG2Q9Y219 1238 aa21.36■■□□□ 1.01
CHGA-202ENST00000334654 ERC2O15083 957 aa21.35■■□□□ 1.01
CHGA-202ENST00000334654 FRAT2O75474 233 aaPredicted RBP21.35■■□□□ 1.01
CHGA-202ENST00000334654 RAD17O75943 681 aa21.35■■□□□ 1.01
CHGA-202ENST00000334654 GLRX3O76003 335 aaKnown RBP21.35■■□□□ 1.01
CHGA-202ENST00000334654 CYP2E1P05181 493 aaPredicted RBP21.35■■□□□ 1.01
CHGA-202ENST00000334654 TTLL5Q6EMB2 1281 aa21.35■■□□□ 1.01
CHGA-202ENST00000334654 EDC3Q96F86 508 aaKnown RBP21.35■■□□□ 1.01
CHGA-202ENST00000334654 RGS3P49796 1198 aa21.34■■□□□ 1.01
CHGA-202ENST00000334654 CHAF1AQ13111 956 aaPredicted RBP21.34■■□□□ 1.01
CHGA-202ENST00000334654 DACT2Q5SW24 774 aa21.34■■□□□ 1.01
CHGA-202ENST00000334654 STRIP1Q5VSL9 837 aa21.34■■□□□ 1.01
CHGA-202ENST00000334654 ANTXR1Q9H6X2 564 aa21.34■■□□□ 1.01
CHGA-202ENST00000334654 ZNF541Q9H0D2 1346 aa21.34■■□□□ 1.01
CHGA-202ENST00000334654 USP17L3A6NCW0 530 aa21.33■■□□□ 1.01
CHGA-202ENST00000334654 USP17L4A6NCW7 530 aa21.33■■□□□ 1.01
CHGA-202ENST00000334654 DCAF8L1A6NGE4 600 aa21.33■■□□□ 1.01
CHGA-202ENST00000334654 PSMD14O00487 310 aa21.33■■□□□ 1.01
CHGA-202ENST00000334654 VIL1P09327 827 aaKnown RBP21.33■■□□□ 1.01
CHGA-202ENST00000334654 USP17L1Q7RTZ2 530 aa21.33■■□□□ 1.01
CHGA-202ENST00000334654 CERS5Q8N5B7 392 aa21.33■■□□□ 1.01
CHGA-202ENST00000334654 MXD3Q9BW11 206 aa21.33■■□□□ 1.01
CHGA-202ENST00000334654 SALL1Q9NSC2 1324 aa21.33■■□□□ 1
CHGA-202ENST00000334654 GSPT1P15170 499 aaKnown RBP21.32■■□□□ 1
CHGA-202ENST00000334654 GRIK5Q16478 980 aa21.32■■□□□ 1
CHGA-202ENST00000334654 TBC1D9Q6ZT07 1266 aa21.32■■□□□ 1
CHGA-202ENST00000334654 DOCK2Q92608 1830 aa21.32■■□□□ 1
CHGA-202ENST00000334654 TTC22Q5TAA0 569 aa21.32■■□□□ 1
CHGA-202ENST00000334654 CIAPIN1Q6FI81 312 aa21.32■■□□□ 1
CHGA-202ENST00000334654 WDR66Q8TBY9 1149 aa21.32■■□□□ 1
CHGA-202ENST00000334654 DNAJC2Q99543 621 aaKnown RBP21.32■■□□□ 1
CHGA-202ENST00000334654 MAP4K4O95819 1239 aaPredicted RBP21.31■■□□□ 1
CHGA-202ENST00000334654 FKBP1AP62942 108 aaKnown RBP21.31■■□□□ 1
CHGA-202ENST00000334654 GMLQ99445 158 aa21.31■■□□□ 1
CHGA-202ENST00000334654 PIH1D3Q9NQM4 214 aaKnown RBP21.31■■□□□ 1
CHGA-202ENST00000334654 PAG1Q9NWQ8 432 aa21.31■■□□□ 1
CHGA-202ENST00000334654 GOLIM4O00461 696 aa21.3■■□□□ 1
CHGA-202ENST00000334654 EIF6P56537 245 aaKnown RBP21.3■■□□□ 1
CHGA-202ENST00000334654 MFSD14BQ5SR56 506 aa21.3■■□□□ 1
CHGA-202ENST00000334654 TNIP1Q15025 636 aa21.29■■□□□ 1
CHGA-202ENST00000334654 RSBN1LQ6PCB5 846 aaPredicted RBP21.29■■□□□ 1
CHGA-202ENST00000334654 TBC1D22AQ8WUA7 517 aa21.29■■□□□ 1
CHGA-202ENST00000334654 FBXW7Q969H0 707 aa21.29■■□□□ 1
CHGA-202ENST00000334654 ZC3H4Q9UPT8 1303 aaKnown RBP21.29■■□□□ 1
CHGA-202ENST00000334654 PRDX5P30044 214 aa21.28■■□□□ 1
CHGA-202ENST00000334654 ZBTB12Q9Y330 459 aaPredicted RBP21.28■■□□□ 1
CHGA-202ENST00000334654 ZNF384Q8TF68 577 aa21.27■■□□□ 1
CHGA-202ENST00000334654 GPC2Q8N158 579 aa21.26■□□□□ 0.99
CHGA-202ENST00000334654 ABCF2Q9UG63 623 aa21.26■□□□□ 0.99
CHGA-202ENST00000334654 AK9Q5TCS8 1911 aa21.26■□□□□ 0.99
CHGA-202ENST00000334654 MYH7P12883 1935 aa21.26■□□□□ 0.99
CHGA-202ENST00000334654 DDNO94850 711 aaPredicted RBP21.26■□□□□ 0.99
CHGA-202ENST00000334654 SDSP20132 328 aa21.26■□□□□ 0.99
CHGA-202ENST00000334654 TTF1Q15361 905 aaPredicted RBP21.26■□□□□ 0.99
CHGA-202ENST00000334654 KBTBD3Q8NAB2 608 aa21.26■□□□□ 0.99
CHGA-202ENST00000334654 AGBL3Q8NEM8 1001 aa21.26■□□□□ 0.99
CHGA-202ENST00000334654 SUGT1Q9Y2Z0 365 aa21.26■□□□□ 0.99
CHGA-202ENST00000334654 ZGPATQ8N5A5 531 aaKnown RBP21.25■□□□□ 0.99
CHGA-202ENST00000334654 EVI5LQ96CN4 794 aa21.25■□□□□ 0.99
CHGA-202ENST00000334654 GJA3Q9Y6H8 435 aa21.25■□□□□ 0.99
CHGA-202ENST00000334654 MYO3BQ8WXR4 1341 aa21.24■□□□□ 0.99
CHGA-202ENST00000334654 CHGBP05060 677 aa21.24■□□□□ 0.99
CHGA-202ENST00000334654 LDHBP07195 334 aaKnown RBP21.24■□□□□ 0.99
CHGA-202ENST00000334654 BMP2KLQ5H9B9 411 aa21.24■□□□□ 0.99
CHGA-202ENST00000334654 ERICH6Q7L0X2 663 aa21.24■□□□□ 0.99
CHGA-202ENST00000334654 LRP2BPQ9P2M1 347 aa21.24■□□□□ 0.99
CHGA-202ENST00000334654 GLTPD2A6NH11 291 aa21.23■□□□□ 0.99
CHGA-202ENST00000334654 TRIM6-TRIM34B2RNG4 842 aa21.23■□□□□ 0.99
CHGA-202ENST00000334654 RPS12P25398 132 aaKnown RBP21.23■□□□□ 0.99
CHGA-202ENST00000334654 GMPSP49915 693 aaPredicted RBP21.23■□□□□ 0.99
CHGA-202ENST00000334654 MECOMQ03112 1051 aa21.23■□□□□ 0.99
CHGA-202ENST00000334654 SPTY2D1Q68D10 685 aaPredicted RBP21.23■□□□□ 0.99
CHGA-202ENST00000334654 KIAA0825Q8IV33 1275 aa21.23■□□□□ 0.99
CHGA-202ENST00000334654 DPF2Q92785 391 aa21.23■□□□□ 0.99
CHGA-202ENST00000334654 NSUN4Q96CB9 384 aaKnown RBP21.23■□□□□ 0.99
CHGA-202ENST00000334654 MYH2Q9UKX2 1941 aa21.23■□□□□ 0.99
CHGA-202ENST00000334654 SHTN1A0MZ66 631 aa21.22■□□□□ 0.99
Retrieved 100 of 20,778 RNA–protein pairs in 29.7 ms