RNA–Protein interactions for RNA: ENST00000327304.9

EXOSC3-201, Transcript of exosome component 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene EXOSC3, Length 1,806 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EXOSC3-201ENST00000327304 ANTXR1Q9H6X2 564 aa22.69■■□□□ 1.22
EXOSC3-201ENST00000327304 REC8O95072 547 aa22.68■■□□□ 1.22
EXOSC3-201ENST00000327304 EYA3Q99504 573 aa22.68■■□□□ 1.22
EXOSC3-201ENST00000327304 ZC3H12CQ9C0D7 883 aaKnown RBP22.68■■□□□ 1.22
EXOSC3-201ENST00000327304 ARFGEF1Q9Y6D6 1849 aa22.67■■□□□ 1.22
EXOSC3-201ENST00000327304 CYP2E1P05181 493 aaPredicted RBP22.67■■□□□ 1.22
EXOSC3-201ENST00000327304 PSMD1Q99460 953 aa22.67■■□□□ 1.22
EXOSC3-201ENST00000327304 CD209Q9NNX6 404 aa22.67■■□□□ 1.22
EXOSC3-201ENST00000327304 MYH13Q9UKX3 1938 aa22.66■■□□□ 1.22
EXOSC3-201ENST00000327304 SUPT20HQ8NEM7 779 aa22.66■■□□□ 1.22
EXOSC3-201ENST00000327304 TDRD7Q8NHU6 1098 aaKnown RBP22.66■■□□□ 1.22
EXOSC3-201ENST00000327304 USP26Q9BXU7 913 aa22.66■■□□□ 1.22
EXOSC3-201ENST00000327304 SEMA3EO15041 775 aa22.66■■□□□ 1.22
EXOSC3-201ENST00000327304 FRAT2O75474 233 aaPredicted RBP22.66■■□□□ 1.22
EXOSC3-201ENST00000327304 CHMLP26374 656 aa22.66■■□□□ 1.22
EXOSC3-201ENST00000327304 DOK7Q18PE1 504 aa22.66■■□□□ 1.22
EXOSC3-201ENST00000327304 FSD1Q9BTV5 496 aa22.66■■□□□ 1.22
EXOSC3-201ENST00000327304 DENND2AQ9ULE3 1009 aa22.66■■□□□ 1.22
EXOSC3-201ENST00000327304 FER1L6Q2WGJ9 1857 aa22.66■■□□□ 1.22
EXOSC3-201ENST00000327304 IL1R1P14778 569 aa22.65■■□□□ 1.22
EXOSC3-201ENST00000327304 SLC4A3P48751 1232 aa22.65■■□□□ 1.22
EXOSC3-201ENST00000327304 AOC3Q16853 763 aa22.65■■□□□ 1.22
EXOSC3-201ENST00000327304 PIH1D3Q9NQM4 214 aaKnown RBP22.65■■□□□ 1.22
EXOSC3-201ENST00000327304 KIAA2012Q0VF49 1180 aa22.64■■□□□ 1.22
EXOSC3-201ENST00000327304 CHAF1AQ13111 956 aaPredicted RBP22.64■■□□□ 1.22
EXOSC3-201ENST00000327304 KBTBD3Q8NAB2 608 aa22.64■■□□□ 1.22
EXOSC3-201ENST00000327304 ESYT1Q9BSJ8 1104 aa22.64■■□□□ 1.22
EXOSC3-201ENST00000327304 COA1Q9GZY4 146 aa22.64■■□□□ 1.22
EXOSC3-201ENST00000327304 ZNF277Q9NRM2 450 aaPredicted RBP22.64■■□□□ 1.22
EXOSC3-201ENST00000327304 JAG2Q9Y219 1238 aa22.64■■□□□ 1.22
EXOSC3-201ENST00000327304 NFKBIEO00221 500 aa22.64■■□□□ 1.21
EXOSC3-201ENST00000327304 ZBTB22O15209 634 aa22.64■■□□□ 1.21
EXOSC3-201ENST00000327304 PPIP5K2O43314 1243 aa22.63■■□□□ 1.21
EXOSC3-201ENST00000327304 KIF2CQ99661 725 aa22.63■■□□□ 1.21
EXOSC3-201ENST00000327304 ANP32EQ9BTT0 268 aa22.63■■□□□ 1.21
EXOSC3-201ENST00000327304 TBC1D2Q9BYX2 928 aa22.63■■□□□ 1.21
EXOSC3-201ENST00000327304 PDS5AQ29RF7 1337 aaKnown RBP22.63■■□□□ 1.21
EXOSC3-201ENST00000327304 CHD4Q14839 1912 aa22.63■■□□□ 1.21
EXOSC3-201ENST00000327304 MYO5AQ9Y4I1 1855 aaKnown RBP22.62■■□□□ 1.21
EXOSC3-201ENST00000327304 EPB41L2O43491 1005 aaKnown RBP22.62■■□□□ 1.21
EXOSC3-201ENST00000327304 DBNDD1Q9H9R9 158 aa22.62■■□□□ 1.21
EXOSC3-201ENST00000327304 CHGBP05060 677 aa22.61■■□□□ 1.21
EXOSC3-201ENST00000327304 SNX21Q969T3 373 aa22.61■■□□□ 1.21
EXOSC3-201ENST00000327304 TAOK3Q9H2K8 898 aa22.61■■□□□ 1.21
EXOSC3-201ENST00000327304 G3V3G9 751 aa22.61■■□□□ 1.21
EXOSC3-201ENST00000327304 TTF1Q15361 905 aaPredicted RBP22.61■■□□□ 1.21
EXOSC3-201ENST00000327304 DCAF8Q5TAQ9 597 aa22.61■■□□□ 1.21
EXOSC3-201ENST00000327304 COL4A5P29400 1685 aa22.61■■□□□ 1.21
EXOSC3-201ENST00000327304 DOCK2Q92608 1830 aa22.6■■□□□ 1.21
EXOSC3-201ENST00000327304 RFX7Q2KHR2 1363 aa22.6■■□□□ 1.21
EXOSC3-201ENST00000327304 ECE2O60344 883 aa22.59■■□□□ 1.21
EXOSC3-201ENST00000327304 IDH1O75874 414 aaKnown RBP22.59■■□□□ 1.21
EXOSC3-201ENST00000327304 RASSF7Q02833 373 aa22.59■■□□□ 1.21
EXOSC3-201ENST00000327304 SLFNL1Q499Z3 407 aa22.59■■□□□ 1.21
EXOSC3-201ENST00000327304 DIAPH3Q9NSV4 1193 aa22.59■■□□□ 1.21
EXOSC3-201ENST00000327304 ABCF2Q9UG63 623 aa22.59■■□□□ 1.21
EXOSC3-201ENST00000327304 IARSP41252 1262 aaKnown RBP22.58■■□□□ 1.21
EXOSC3-201ENST00000327304 LARGE2Q8N3Y3 721 aa22.58■■□□□ 1.21
EXOSC3-201ENST00000327304 LTBP3Q9NS15 1303 aa22.57■■□□□ 1.2
EXOSC3-201ENST00000327304 YBX3P16989 372 aaKnown RBP eCLIP22.57■■□□□ 1.2
EXOSC3-201ENST00000327304 GTF2IP78347 998 aa22.57■■□□□ 1.2
EXOSC3-201ENST00000327304 NMIQ13287 307 aaPredicted RBP22.57■■□□□ 1.2
EXOSC3-201ENST00000327304 PODNQ7Z5L7 613 aa22.57■■□□□ 1.2
EXOSC3-201ENST00000327304 WDR66Q8TBY9 1149 aa22.57■■□□□ 1.2
EXOSC3-201ENST00000327304 KCNQ5Q9NR82 932 aa22.57■■□□□ 1.2
EXOSC3-201ENST00000327304 MYH7P12883 1935 aa22.57■■□□□ 1.2
EXOSC3-201ENST00000327304 SCN9AQ15858 1988 aa22.57■■□□□ 1.2
EXOSC3-201ENST00000327304 FAM205AQ6ZU69 1335 aa22.57■■□□□ 1.2
EXOSC3-201ENST00000327304 HSCBQ8IWL3 235 aa22.57■■□□□ 1.2
EXOSC3-201ENST00000327304 FAM227BQ96M60 508 aa22.57■■□□□ 1.2
EXOSC3-201ENST00000327304 VPS33BQ9H267 617 aa22.57■■□□□ 1.2
EXOSC3-201ENST00000327304 LRP2BPQ9P2M1 347 aa22.57■■□□□ 1.2
EXOSC3-201ENST00000327304 SALL1Q9NSC2 1324 aa22.56■■□□□ 1.2
EXOSC3-201ENST00000327304 HIP1O00291 1037 aa22.56■■□□□ 1.2
EXOSC3-201ENST00000327304 RNF113AO15541 343 aaKnown RBP22.56■■□□□ 1.2
EXOSC3-201ENST00000327304 PRELPP51888 382 aa22.56■■□□□ 1.2
EXOSC3-201ENST00000327304 CWC27Q6UX04 472 aaKnown RBP22.56■■□□□ 1.2
EXOSC3-201ENST00000327304 FBXW7Q969H0 707 aa22.56■■□□□ 1.2
EXOSC3-201ENST00000327304 IL25Q9H293 177 aa22.56■■□□□ 1.2
EXOSC3-201ENST00000327304 A0A0D9SFI3 127 aa22.55■■□□□ 1.2
EXOSC3-201ENST00000327304 YDJCA8MPS7 323 aa22.55■■□□□ 1.2
EXOSC3-201ENST00000327304 RABEP1Q15276 862 aa22.55■■□□□ 1.2
EXOSC3-201ENST00000327304 GRIK5Q16478 980 aa22.55■■□□□ 1.2
EXOSC3-201ENST00000327304 DDX24Q9GZR7 859 aaKnown RBP eCLIP22.55■■□□□ 1.2
EXOSC3-201ENST00000327304 PDE6AP16499 860 aa22.54■■□□□ 1.2
EXOSC3-201ENST00000327304 PRDX5P30044 214 aa22.54■■□□□ 1.2
EXOSC3-201ENST00000327304 MAP3K12Q12852 859 aa22.54■■□□□ 1.2
EXOSC3-201ENST00000327304 SLC9C2Q5TAH2 1124 aa22.54■■□□□ 1.2
EXOSC3-201ENST00000327304 ARHGAP27Q6ZUM4 889 aa22.54■■□□□ 1.2
EXOSC3-201ENST00000327304 RAI14Q9P0K7 980 aa22.54■■□□□ 1.2
EXOSC3-201ENST00000327304 ADD2P35612 726 aa22.54■■□□□ 1.2
EXOSC3-201ENST00000327304 TTLL5Q6EMB2 1281 aa22.54■■□□□ 1.2
EXOSC3-201ENST00000327304 TICAM2Q86XR7 235 aa22.54■■□□□ 1.2
EXOSC3-201ENST00000327304 ZNF646O15015 1829 aaPredicted RBP22.53■■□□□ 1.2
EXOSC3-201ENST00000327304 SGSM2O43147 1006 aa22.53■■□□□ 1.2
EXOSC3-201ENST00000327304 MCCP23508 829 aa22.53■■□□□ 1.2
EXOSC3-201ENST00000327304 MFSD14BQ5SR56 506 aa22.53■■□□□ 1.2
EXOSC3-201ENST00000327304 MAGEB6Q8N7X4 407 aa22.53■■□□□ 1.2
EXOSC3-201ENST00000327304 RUFY2Q8WXA3 655 aa22.53■■□□□ 1.2
EXOSC3-201ENST00000327304 MXD3Q9BW11 206 aa22.53■■□□□ 1.2
Retrieved 100 of 20,778 RNA–protein pairs in 170.6 ms