RNA–Protein interactions for RNA: ENST00000322535.10

SF3B2-201, Transcript of splicing factor 3b subunit 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SF3B2, Length 2,903 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B2-201ENST00000322535 LMO7Q8WWI1 1683 aa11.94□□□□□ -0.5
SF3B2-201ENST00000322535 LRRC37A3O60309 1634 aa11.94□□□□□ -0.5
SF3B2-201ENST00000322535 CASTP20810 708 aaKnown RBP11.94□□□□□ -0.5
SF3B2-201ENST00000322535 UBE2HP62256 183 aa11.94□□□□□ -0.5
SF3B2-201ENST00000322535 PSMD2Q13200 908 aa11.94□□□□□ -0.5
SF3B2-201ENST00000322535 KDM4CQ9H3R0 1056 aa11.94□□□□□ -0.5
SF3B2-201ENST00000322535 ZSCAN16Q9H4T2 348 aaPredicted RBP11.94□□□□□ -0.5
SF3B2-201ENST00000322535 WDR33Q9C0J8 1336 aaKnown RBP11.94□□□□□ -0.5
SF3B2-201ENST00000322535 PNMA6EA0A0J9YXQ4 647 aa11.93□□□□□ -0.5
SF3B2-201ENST00000322535 KCNQ2O43526 872 aa11.93□□□□□ -0.5
SF3B2-201ENST00000322535 TPM1P09493 284 aa11.93□□□□□ -0.5
SF3B2-201ENST00000322535 H2AFXP16104 143 aaPredicted RBP11.93□□□□□ -0.5
SF3B2-201ENST00000322535 SDSP20132 328 aa11.93□□□□□ -0.5
SF3B2-201ENST00000322535 LEKR1Q6ZMV7 388 aa11.93□□□□□ -0.5
SF3B2-201ENST00000322535 DNAAF4Q8WXU2 420 aa11.93□□□□□ -0.5
SF3B2-201ENST00000322535 EME2A4GXA9 379 aaPredicted RBP11.93□□□□□ -0.5
SF3B2-201ENST00000322535 SLFNL1Q499Z3 407 aa11.93□□□□□ -0.5
SF3B2-201ENST00000322535 ANO6Q4KMQ2 910 aa11.93□□□□□ -0.5
SF3B2-201ENST00000322535 MEX3CQ5U5Q3 659 aaKnown RBP11.93□□□□□ -0.5
SF3B2-201ENST00000322535 TSHZ3Q63HK5 1081 aa11.93□□□□□ -0.5
SF3B2-201ENST00000322535 RINLQ6ZS11 566 aa11.93□□□□□ -0.5
SF3B2-201ENST00000322535 SMIM5Q71RC9 77 aa11.93□□□□□ -0.5
SF3B2-201ENST00000322535 RIC3Q7Z5B4 369 aa11.93□□□□□ -0.5
SF3B2-201ENST00000322535 FAM200AQ8TCP9 573 aa11.93□□□□□ -0.5
SF3B2-201ENST00000322535 FMNL2Q96PY5 1086 aa11.93□□□□□ -0.5
SF3B2-201ENST00000322535 USP44Q9H0E7 712 aa11.93□□□□□ -0.5
SF3B2-201ENST00000322535 PICK1Q9NRD5 415 aa11.93□□□□□ -0.5
SF3B2-201ENST00000322535 ARGLU1Q9NWB6 273 aaPredicted RBP11.93□□□□□ -0.5
SF3B2-201ENST00000322535 BIN2Q9UBW5 565 aaPredicted RBP11.93□□□□□ -0.5
SF3B2-201ENST00000322535 ZNF75DP51815 510 aa11.93□□□□□ -0.5
SF3B2-201ENST00000322535 SMC1AQ14683 1233 aaKnown RBP11.93□□□□□ -0.5
SF3B2-201ENST00000322535 DDB1Q16531 1140 aa11.93□□□□□ -0.5
SF3B2-201ENST00000322535 CEP85Q6P2H3 762 aa11.93□□□□□ -0.5
SF3B2-201ENST00000322535 UBXN4Q92575 508 aa11.93□□□□□ -0.5
SF3B2-201ENST00000322535 TCHHQ07283 1943 aa11.92□□□□□ -0.5
SF3B2-201ENST00000322535 SNRPA1P09661 255 aaKnown RBP11.92□□□□□ -0.5
SF3B2-201ENST00000322535 GNL2Q13823 731 aaKnown RBP11.92□□□□□ -0.5
SF3B2-201ENST00000322535 TTC22Q5TAA0 569 aa11.92□□□□□ -0.5
SF3B2-201ENST00000322535 FUCA2Q9BTY2 467 aa11.92□□□□□ -0.5
SF3B2-201ENST00000322535 ZBTB3Q9H5J0 574 aa11.92□□□□□ -0.5
SF3B2-201ENST00000322535 AP1G2O75843 785 aa11.92□□□□□ -0.5
SF3B2-201ENST00000322535 CBX8Q9HC52 389 aa11.92□□□□□ -0.5
SF3B2-201ENST00000322535 NBPF26B4DH59 902 aa11.91□□□□□ -0.5
SF3B2-201ENST00000322535 ACTN2P35609 894 aa11.91□□□□□ -0.5
SF3B2-201ENST00000322535 CORO7P57737 925 aa11.91□□□□□ -0.5
SF3B2-201ENST00000322535 IRX1P78414 480 aaPredicted RBP11.91□□□□□ -0.5
SF3B2-201ENST00000322535 NBPF14Q5TI25 921 aa11.91□□□□□ -0.5
SF3B2-201ENST00000322535 CPLX2Q6PUV4 134 aaKnown RBP11.91□□□□□ -0.5
SF3B2-201ENST00000322535 TTLL7Q6ZT98 887 aa11.91□□□□□ -0.5
SF3B2-201ENST00000322535 TRIM74Q86UV6 250 aa11.91□□□□□ -0.5
SF3B2-201ENST00000322535 TRIM73Q86UV7 250 aa11.91□□□□□ -0.5
SF3B2-201ENST00000322535 NBPF15Q8N660 670 aa11.91□□□□□ -0.5
SF3B2-201ENST00000322535 IQUBQ8NA54 791 aa11.91□□□□□ -0.5
SF3B2-201ENST00000322535 BABAM1Q9NWV8 329 aa11.91□□□□□ -0.5
SF3B2-201ENST00000322535 ADAM21Q9UKJ8 722 aa11.91□□□□□ -0.5
SF3B2-201ENST00000322535 COL16A1Q07092 1604 aaPredicted RBP11.91□□□□□ -0.5
SF3B2-201ENST00000322535 ADCY9O60503 1353 aa11.91□□□□□ -0.5
SF3B2-201ENST00000322535 MYBL2P10244 700 aa11.91□□□□□ -0.5
SF3B2-201ENST00000322535 CCNHP51946 323 aaPredicted RBP11.91□□□□□ -0.5
SF3B2-201ENST00000322535 TYRO3Q06418 890 aa11.91□□□□□ -0.5
SF3B2-201ENST00000322535 ADCY2Q08462 1091 aa11.91□□□□□ -0.5
SF3B2-201ENST00000322535 DNAJC10Q8IXB1 793 aa11.91□□□□□ -0.5
SF3B2-201ENST00000322535 MICALL1Q8N3F8 863 aa11.91□□□□□ -0.5
SF3B2-201ENST00000322535 MARCH10Q8NA82 808 aaPredicted RBP11.91□□□□□ -0.5
SF3B2-201ENST00000322535 KCNB2Q92953 911 aa11.91□□□□□ -0.5
SF3B2-201ENST00000322535 CCDC97Q96F63 343 aaPredicted RBP11.91□□□□□ -0.5
SF3B2-201ENST00000322535 MYD88Q99836 296 aa11.91□□□□□ -0.5
SF3B2-201ENST00000322535 PALD1Q9ULE6 856 aa11.91□□□□□ -0.5
SF3B2-201ENST00000322535 ZNF232Q9UNY5 417 aa11.91□□□□□ -0.5
SF3B2-201ENST00000322535 SPATA31A1Q5TZJ5 1347 aa11.91□□□□□ -0.5
SF3B2-201ENST00000322535 CCDC171Q6TFL3 1326 aa11.91□□□□□ -0.5
SF3B2-201ENST00000322535 IBSPP21815 317 aaPredicted RBP11.9□□□□□ -0.5
SF3B2-201ENST00000322535 CCT4P50991 539 aaKnown RBP11.9□□□□□ -0.5
SF3B2-201ENST00000322535 DNM1Q05193 864 aaKnown RBP11.9□□□□□ -0.5
SF3B2-201ENST00000322535 AP1ARQ63HQ0 302 aa11.9□□□□□ -0.5
SF3B2-201ENST00000322535 KAT2BQ92831 832 aa11.9□□□□□ -0.5
SF3B2-201ENST00000322535 KINO60870 393 aaKnown RBP11.9□□□□□ -0.5
SF3B2-201ENST00000322535 SASH3O75995 380 aa11.9□□□□□ -0.5
SF3B2-201ENST00000322535 UBTFL1P0CB47 393 aaPredicted RBP11.9□□□□□ -0.5
SF3B2-201ENST00000322535 LRRC8AQ8IWT6 810 aa11.9□□□□□ -0.5
SF3B2-201ENST00000322535 KLHL23Q8NBE8 558 aa11.9□□□□□ -0.5
SF3B2-201ENST00000322535 DDX21Q9NR30 783 aaKnown RBP eCLIP11.9□□□□□ -0.5
SF3B2-201ENST00000322535 C9orf78Q9NZ63 289 aaPredicted RBP11.9□□□□□ -0.5
SF3B2-201ENST00000322535 USP21Q9UK80 565 aa11.9□□□□□ -0.5
SF3B2-201ENST00000322535 ERC2O15083 957 aa11.9□□□□□ -0.51
SF3B2-201ENST00000322535 C21orf2O43822 256 aa11.9□□□□□ -0.51
SF3B2-201ENST00000322535 CPP00450 1065 aa11.9□□□□□ -0.51
SF3B2-201ENST00000322535 BEND3Q5T5X7 828 aa11.9□□□□□ -0.51
SF3B2-201ENST00000322535 RNF20Q5VTR2 975 aa11.9□□□□□ -0.51
SF3B2-201ENST00000322535 HOMER1Q86YM7 354 aa11.9□□□□□ -0.51
SF3B2-201ENST00000322535 AHDC1Q5TGY3 1603 aaPredicted RBP11.9□□□□□ -0.51
SF3B2-201ENST00000322535 GNAI2P04899 355 aa11.89□□□□□ -0.51
SF3B2-201ENST00000322535 SNW1Q13573 536 aaKnown RBP11.89□□□□□ -0.51
SF3B2-201ENST00000322535 LRRC31Q6UY01 552 aa11.89□□□□□ -0.51
SF3B2-201ENST00000322535 TSHZ1Q6ZSZ6 1077 aa11.89□□□□□ -0.51
SF3B2-201ENST00000322535 ERCC4Q92889 916 aaPredicted RBP11.89□□□□□ -0.51
SF3B2-201ENST00000322535 FBXW7Q969H0 707 aa11.89□□□□□ -0.51
SF3B2-201ENST00000322535 SLC4A9Q96Q91 983 aa11.89□□□□□ -0.51
SF3B2-201ENST00000322535 ANO2Q9NQ90 1003 aa11.89□□□□□ -0.51
SF3B2-201ENST00000322535 CPSF2Q9P2I0 782 aaKnown RBP11.89□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 56.2 ms